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The map label for this gene is ygaK [H]

Identifier: 154685342

GI number: 154685342

Start: 887342

End: 888709

Strand: Reverse

Name: ygaK [H]

Synonym: RBAM_009070

Alternate gene names: 154685342

Gene position: 888709-887342 (Counterclockwise)

Preceding gene: 154685344

Following gene: 154685337

Centisome position: 22.68

GC content: 48.32

Gene sequence:

>1368_bases
GTGAGTGAGAATGTGGAAAAGACAACATTGACCGGTCGCATCGTCAAAAAAGATGACCCGGACTATAATGCTGCGAGAAC
CAATATCAATTTAAGCCTGCAAAGATATCCAGACATCATTGTGTTTTGTCAAAACAAACATGACGCCCTCAATGCGGTGA
GATGGGCGCGTGAGAACAATGTGCCTTTCCGTATCAGAGGCGGAAGACACAGCTACGAAAATTTTTCCCTGTTAAATGAC
GGACTAGTCATTGATCTCAGTGAAATGAAGAAAATAAGAGTAAATGAGGATAAGCGGCTGGTCTCGATTGAAGCGGGAGC
CGAATTGGGGGAAGTCTACCGGACACTCTGGCGGTACGGCTTGACCCTTCCTGCGGGAACCATTGCGAATGTGGGAATCA
CGGGGCTGACGCTCGGGGGAGGAATCGGATATTTAACAAGGACAGCCGGACTTACTTGCGATCGTCTCCTCCAGCTCGAA
ATGATCATAGCGGACGAAAAAGCGGGTGCTGACTTGATCACAGTCAACCGTTCAAAGCACTCTGATCTATTTTGGGCGTC
TCAGGGAGGAGGGGGAGGCAACTTCGGCATTGTCACATCCATGATGTTTAAAGCCGTACCGATCTCGTGCGTGTCTGTTT
TTTCTGTCACTTGGGGCTGGGATGATTTTGAGGAAGTATTTAACACATGGCAGCGCTGGGCTCCATTTACAGACAACCGG
CTTACCTCATCAATTCAGTTTTGGCCTAAGGAAGTCAACCGCATAGAAGCGCTCGGTCAATTTACCGGGACAAAGGATGA
GCTGAAAGAACTGCTGGCTCCGTTAATGAAAGCGGGAAAACCGGCAAGCGGCATGGTCAAGACAGTGCCATTTATTAAAG
CGGCAGCCTTTTTTAACAGCCCGGGAGGCAATCAGCCGCAAAAGATGAAGCGGTCAGGATCCTTTATTGAAAAACCATTA
TCAACACGCGCAATATCCACTTTAAAGCGCTATTTAGAGCACGCTCCGAACGAAAACGCCAGTGTCTGGCAGCAATCTCT
CGGCGGGGCGGCCGGACGGATCGCTCCGGACCAAACGGCATTCTACTATCGCAACGCAATCATTGCCCAAGAATATATTA
CAACTTGGACATCTGCTGAAGAAGAAAGACAAAATGTCCGCTGGATCGAAGGACTGAGAACGTCCCTATCAAGAGAAACG
ATGGGAGATTACGTGAATTGGCCTGATAGAGAAATCAGAAACTGGCTGCAAACATATTACGGAGAAAATGTTCACCGCCT
CCGTCAAGTCAAAACGAAATACGATCCGGAAAATATATTCCGCTTTGAACAGAGCATTCCGCCGCTTCGCCGTTCACCGT
TTTTCTAA

Upstream 100 bases:

>100_bases
TCAACTACAATTTAAAATATCGTTTCCTTCCGGGGGTTTTCCTCATACACTCTCTCATTTTTCCGCATATGCTAGAAAAC
ATAGCAGAGTACAAGTGAAA

Downstream 100 bases:

>100_bases
AAAAGATGAAGATGGGCAAACTCCATCTTCATCTTTTCTTTTATTGATATAAACGGCTTCCCTTCTCTGCAAACTCTTTT
GCTTTTTCTTTCAGCCCTTC

Product: YgaK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MSENVEKTTLTGRIVKKDDPDYNAARTNINLSLQRYPDIIVFCQNKHDALNAVRWARENNVPFRIRGGRHSYENFSLLND
GLVIDLSEMKKIRVNEDKRLVSIEAGAELGEVYRTLWRYGLTLPAGTIANVGITGLTLGGGIGYLTRTAGLTCDRLLQLE
MIIADEKAGADLITVNRSKHSDLFWASQGGGGGNFGIVTSMMFKAVPISCVSVFSVTWGWDDFEEVFNTWQRWAPFTDNR
LTSSIQFWPKEVNRIEALGQFTGTKDELKELLAPLMKAGKPASGMVKTVPFIKAAAFFNSPGGNQPQKMKRSGSFIEKPL
STRAISTLKRYLEHAPNENASVWQQSLGGAAGRIAPDQTAFYYRNAIIAQEYITTWTSAEEERQNVRWIEGLRTSLSRET
MGDYVNWPDREIRNWLQTYYGENVHRLRQVKTKYDPENIFRFEQSIPPLRRSPFF

Sequences:

>Translated_455_residues
MSENVEKTTLTGRIVKKDDPDYNAARTNINLSLQRYPDIIVFCQNKHDALNAVRWARENNVPFRIRGGRHSYENFSLLND
GLVIDLSEMKKIRVNEDKRLVSIEAGAELGEVYRTLWRYGLTLPAGTIANVGITGLTLGGGIGYLTRTAGLTCDRLLQLE
MIIADEKAGADLITVNRSKHSDLFWASQGGGGGNFGIVTSMMFKAVPISCVSVFSVTWGWDDFEEVFNTWQRWAPFTDNR
LTSSIQFWPKEVNRIEALGQFTGTKDELKELLAPLMKAGKPASGMVKTVPFIKAAAFFNSPGGNQPQKMKRSGSFIEKPL
STRAISTLKRYLEHAPNENASVWQQSLGGAAGRIAPDQTAFYYRNAIIAQEYITTWTSAEEERQNVRWIEGLRTSLSRET
MGDYVNWPDREIRNWLQTYYGENVHRLRQVKTKYDPENIFRFEQSIPPLRRSPFF
>Mature_454_residues
SENVEKTTLTGRIVKKDDPDYNAARTNINLSLQRYPDIIVFCQNKHDALNAVRWARENNVPFRIRGGRHSYENFSLLNDG
LVIDLSEMKKIRVNEDKRLVSIEAGAELGEVYRTLWRYGLTLPAGTIANVGITGLTLGGGIGYLTRTAGLTCDRLLQLEM
IIADEKAGADLITVNRSKHSDLFWASQGGGGGNFGIVTSMMFKAVPISCVSVFSVTWGWDDFEEVFNTWQRWAPFTDNRL
TSSIQFWPKEVNRIEALGQFTGTKDELKELLAPLMKAGKPASGMVKTVPFIKAAAFFNSPGGNQPQKMKRSGSFIEKPLS
TRAISTLKRYLEHAPNENASVWQQSLGGAAGRIAPDQTAFYYRNAIIAQEYITTWTSAEEERQNVRWIEGLRTSLSRETM
GDYVNWPDREIRNWLQTYYGENVHRLRQVKTKYDPENIFRFEQSIPPLRRSPFF

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094 [H]

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 51544; Mature: 51413

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENVEKTTLTGRIVKKDDPDYNAARTNINLSLQRYPDIIVFCQNKHDALNAVRWARENN
CCCCCCHHEEEEEEEECCCCCCCCEECEEEEEEECCCCEEEEECCCCHHHHHHHHHHCCC
VPFRIRGGRHSYENFSLLNDGLVIDLSEMKKIRVNEDKRLVSIEAGAELGEVYRTLWRYG
CCEEEECCCCCCCCCEEECCCEEEEHHHHHHEEECCCCEEEEEECCCHHHHHHHHHHHCC
LTLPAGTIANVGITGLTLGGGIGYLTRTAGLTCDRLLQLEMIIADEKAGADLITVNRSKH
CCCCCCCHHHCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHEEECCCCCCCEEEECCCCC
SDLFWASQGGGGGNFGIVTSMMFKAVPISCVSVFSVTWGWDDFEEVFNTWQRWAPFTDNR
CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCCH
LTSSIQFWPKEVNRIEALGQFTGTKDELKELLAPLMKAGKPASGMVKTVPFIKAAAFFNS
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
PGGNQPQKMKRSGSFIEKPLSTRAISTLKRYLEHAPNENASVWQQSLGGAAGRIAPDQTA
CCCCCHHHHHHCCCHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHH
FYYRNAIIAQEYITTWTSAEEERQNVRWIEGLRTSLSRETMGDYVNWPDREIRNWLQTYY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
GENVHRLRQVKTKYDPENIFRFEQSIPPLRRSPFF
CCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SENVEKTTLTGRIVKKDDPDYNAARTNINLSLQRYPDIIVFCQNKHDALNAVRWARENN
CCCCCHHEEEEEEEECCCCCCCCEECEEEEEEECCCCEEEEECCCCHHHHHHHHHHCCC
VPFRIRGGRHSYENFSLLNDGLVIDLSEMKKIRVNEDKRLVSIEAGAELGEVYRTLWRYG
CCEEEECCCCCCCCCEEECCCEEEEHHHHHHEEECCCCEEEEEECCCHHHHHHHHHHHCC
LTLPAGTIANVGITGLTLGGGIGYLTRTAGLTCDRLLQLEMIIADEKAGADLITVNRSKH
CCCCCCCHHHCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHEEECCCCCCCEEEECCCCC
SDLFWASQGGGGGNFGIVTSMMFKAVPISCVSVFSVTWGWDDFEEVFNTWQRWAPFTDNR
CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCCH
LTSSIQFWPKEVNRIEALGQFTGTKDELKELLAPLMKAGKPASGMVKTVPFIKAAAFFNS
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
PGGNQPQKMKRSGSFIEKPLSTRAISTLKRYLEHAPNENASVWQQSLGGAAGRIAPDQTA
CCCCCHHHHHHCCCHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHH
FYYRNAIIAQEYITTWTSAEEERQNVRWIEGLRTSLSRETMGDYVNWPDREIRNWLQTYY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
GENVHRLRQVKTKYDPENIFRFEQSIPPLRRSPFF
CCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]