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The map label for this gene is padR [H]

Identifier: 154685299

GI number: 154685299

Start: 839878

End: 840429

Strand: Reverse

Name: padR [H]

Synonym: RBAM_008450

Alternate gene names: 154685299

Gene position: 840429-839878 (Counterclockwise)

Preceding gene: 154685305

Following gene: 154685280

Centisome position: 21.45

GC content: 44.2

Gene sequence:

>552_bases
ATGAGAATTTTAAAGTACGCGATTTTAGGGCTTTTGCGAAAAGGCGAATTGAGCGGATATGATATATCGAGCTATTTTAA
AGAAGAGCTCGGCCAGTTTTGGAGCGCAAAGCACAGCCAGATTTATCCGGAATTAAAAAAACTGACGGCTGAGGGATTTA
TTACGTTTCGCACTGCGATTCAAGGAACGAAGCTTGAGAAAAAAATGTACACGCTGACTGACAAGGGAGAGCTGGAGCTT
GCTGCCTGGCTGACGAAAAAAGACCCGATTCCGGAAACGGTCAAGGATGAATTTATGCTGAAGGCTTATTTCATCTCAGC
TTTGACGCAGGAAGAAGCGGATGAGCTATTCACCGATCAGCTCGTAAAGCGGAAGGAGAAATTGTCCGATCTGGAAAACA
GTTATCAAGAACTGATGACATCGTCCGCGGAGGCGGATTCTTTTTCTTCTCCTGATTTCGGCCATTATCTCGTGCTGACA
AAAGCGCTTGAGCGGGAACGGAATTATATTTCCTGGCTTGAAGATATTTTGGCTCTCATCAAAAAAGCATAA

Upstream 100 bases:

>100_bases
ATTTTGCCGCCGCAGATTCAATGACAAGCATCCGGCACTTCTGCGTTTTTGAGCGGCCGTATGGTATACTAGCTGTCAAA
TGAATGGCTTGGAGGGCAAC

Downstream 100 bases:

>100_bases
ACAAAACGGGGCGGCTCTGTATCTGCAAGCCGCCTGTTTACGTTCTGAGAACCGCATTGATAAACGAATCAGCCATTAAA
ATAAGAAAAAGCAGACTGAA

Product: PadR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MRILKYAILGLLRKGELSGYDISSYFKEELGQFWSAKHSQIYPELKKLTAEGFITFRTAIQGTKLEKKMYTLTDKGELEL
AAWLTKKDPIPETVKDEFMLKAYFISALTQEEADELFTDQLVKRKEKLSDLENSYQELMTSSAEADSFSSPDFGHYLVLT
KALERERNYISWLEDILALIKKA

Sequences:

>Translated_183_residues
MRILKYAILGLLRKGELSGYDISSYFKEELGQFWSAKHSQIYPELKKLTAEGFITFRTAIQGTKLEKKMYTLTDKGELEL
AAWLTKKDPIPETVKDEFMLKAYFISALTQEEADELFTDQLVKRKEKLSDLENSYQELMTSSAEADSFSSPDFGHYLVLT
KALERERNYISWLEDILALIKKA
>Mature_183_residues
MRILKYAILGLLRKGELSGYDISSYFKEELGQFWSAKHSQIYPELKKLTAEGFITFRTAIQGTKLEKKMYTLTDKGELEL
AAWLTKKDPIPETVKDEFMLKAYFISALTQEEADELFTDQLVKRKEKLSDLENSYQELMTSSAEADSFSSPDFGHYLVLT
KALERERNYISWLEDILALIKKA

Specific function: Negative transcriptional regulator of padC phenolic acid decarboxylase [H]

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018309
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR; PF10400 Vir_act_alpha_C [H]

EC number: NA

Molecular weight: Translated: 21156; Mature: 21156

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILKYAILGLLRKGELSGYDISSYFKEELGQFWSAKHSQIYPELKKLTAEGFITFRTAI
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
QGTKLEKKMYTLTDKGELELAAWLTKKDPIPETVKDEFMLKAYFISALTQEEADELFTDQ
CCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVKRKEKLSDLENSYQELMTSSAEADSFSSPDFGHYLVLTKALERERNYISWLEDILALI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KKA
HCC
>Mature Secondary Structure
MRILKYAILGLLRKGELSGYDISSYFKEELGQFWSAKHSQIYPELKKLTAEGFITFRTAI
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
QGTKLEKKMYTLTDKGELELAAWLTKKDPIPETVKDEFMLKAYFISALTQEEADELFTDQ
CCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVKRKEKLSDLENSYQELMTSSAEADSFSSPDFGHYLVLTKALERERNYISWLEDILALI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KKA
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]