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The map label for this gene is yfkF [H]

Identifier: 154685268

GI number: 154685268

Start: 804536

End: 805714

Strand: Reverse

Name: yfkF [H]

Synonym: RBAM_008140

Alternate gene names: 154685268

Gene position: 805714-804536 (Counterclockwise)

Preceding gene: 154685271

Following gene: 154685264

Centisome position: 20.56

GC content: 52.16

Gene sequence:

>1179_bases
ATGTCACGACTGTACTTCTTTATTTTGGTTCTGCTTGTTTCCATCTCCGGATTTTCCCAAGGCATGCTTCTGCCGGTGAT
CTCCGTCATTTTTGAAACGAACGGGGAATCAGCCGCTATAAACGGACTTCACGCAACCGGCCTTTATATCGGCGTGCTTC
TGGCGTCGCCGTTTATGGAGGCCCCGCTACGCAAGCTCGGATTCAAACCTCTGATGGTCATGGGCGGATTTCTTGTTATC
ATCAGCTTATTCAGTTTTATTTGGCTTCAATCCATATGGTTATGGTTTTTTCTTCGGCTGCTTATCGGAATCGGGGATCA
TATGCTGCATTTTTCAACCCAAACGTGGGTGACGTCAAAGTCAACGCCCCGAAACAGAGGAAGAAACATTTCGCTGTACG
GACTGTCCTTCGGGCTCGGATTCGCTGTCGGCCCGTTCATGGTCCCTCTTGTGAAAACAAGTCCGTCCCTTCCGTTTATC
GTATCCGGCTGTATCAGTCTTGCCGCCTGGCTGTTTGTATTTGTCTTACGTAACGAGTACCCGGCGCAAGGTCCGGATGA
AACATCCGGGGACAACAGCGCAAAACGGTTTTACCGCGCCCTTCTTTTCGGCTGGGTCGCTTTTCTCCCGGCTTTCGGGT
ACGGTTTTTTAGAAACGGCGCTGAACGGAAGCTTTCCCGTGTACGCCCTGCGCTTAGGCATATCCGTCGATGCCGTCGCG
CTGATATTGCCCGCTTTTGCCATCGGAAGTATTGTATTCCAGTTCCCTCTCGGTTTATTAAGCGATCGATTCGGGAGAAA
ACGTGTCCTGCTCGTCATCTTATTAACGGGTGCCCTTTGCTTTTTGACGGCCGGACTGTTTCCGTCGCCTTCTGTCATCG
GCGGCTGCTTTTTCACGGCGGGAATGGCGGTCGGCAGTATGTTTTCCCTCGGCATCAGCTATATGAGCGACCTGCTGCCG
TCCCATCTGCTGCCGGCGGGCAATCTGCTCTGCGGCATTTCCTTCAGCCTCGGCAGCATGATCGGCCCGGTGGCGGGCGG
CTGGTATATGCAACGGTTTGAAAGCGCCAATTTGTTTTACTTTATTACGGTGATTCTGGTCTGTATTTGGCTTGCGCTCG
TCTTCGGGAAAACAAAGCACAGTCCCGCATCCGAATCCCATTCTTTTCCGGCCTCATAA

Upstream 100 bases:

>100_bases
AATTACACTTCCGCGGCAGCCCGAATTGGCATTTTCAGGTTGCCGGACGCAGCAAATCCGTGTACGATCAAGAAAGATAC
TGAAGAAGGAGAAATACGCG

Downstream 100 bases:

>100_bases
AAAAGCCGCCTGATCTAAGTCAGGCGGCTTCTTTCTAGTGGTATCCGTTCTGCCCGTTAGCGCTTCCGCTTGTTTTATTC
TTCGGGCCGTTTTTGGAGTT

Product: YfkF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MSRLYFFILVLLVSISGFSQGMLLPVISVIFETNGESAAINGLHATGLYIGVLLASPFMEAPLRKLGFKPLMVMGGFLVI
ISLFSFIWLQSIWLWFFLRLLIGIGDHMLHFSTQTWVTSKSTPRNRGRNISLYGLSFGLGFAVGPFMVPLVKTSPSLPFI
VSGCISLAAWLFVFVLRNEYPAQGPDETSGDNSAKRFYRALLFGWVAFLPAFGYGFLETALNGSFPVYALRLGISVDAVA
LILPAFAIGSIVFQFPLGLLSDRFGRKRVLLVILLTGALCFLTAGLFPSPSVIGGCFFTAGMAVGSMFSLGISYMSDLLP
SHLLPAGNLLCGISFSLGSMIGPVAGGWYMQRFESANLFYFITVILVCIWLALVFGKTKHSPASESHSFPAS

Sequences:

>Translated_392_residues
MSRLYFFILVLLVSISGFSQGMLLPVISVIFETNGESAAINGLHATGLYIGVLLASPFMEAPLRKLGFKPLMVMGGFLVI
ISLFSFIWLQSIWLWFFLRLLIGIGDHMLHFSTQTWVTSKSTPRNRGRNISLYGLSFGLGFAVGPFMVPLVKTSPSLPFI
VSGCISLAAWLFVFVLRNEYPAQGPDETSGDNSAKRFYRALLFGWVAFLPAFGYGFLETALNGSFPVYALRLGISVDAVA
LILPAFAIGSIVFQFPLGLLSDRFGRKRVLLVILLTGALCFLTAGLFPSPSVIGGCFFTAGMAVGSMFSLGISYMSDLLP
SHLLPAGNLLCGISFSLGSMIGPVAGGWYMQRFESANLFYFITVILVCIWLALVFGKTKHSPASESHSFPAS
>Mature_391_residues
SRLYFFILVLLVSISGFSQGMLLPVISVIFETNGESAAINGLHATGLYIGVLLASPFMEAPLRKLGFKPLMVMGGFLVII
SLFSFIWLQSIWLWFFLRLLIGIGDHMLHFSTQTWVTSKSTPRNRGRNISLYGLSFGLGFAVGPFMVPLVKTSPSLPFIV
SGCISLAAWLFVFVLRNEYPAQGPDETSGDNSAKRFYRALLFGWVAFLPAFGYGFLETALNGSFPVYALRLGISVDAVAL
ILPAFAIGSIVFQFPLGLLSDRFGRKRVLLVILLTGALCFLTAGLFPSPSVIGGCFFTAGMAVGSMFSLGISYMSDLLPS
HLLPAGNLLCGISFSLGSMIGPVAGGWYMQRFESANLFYFITVILVCIWLALVFGKTKHSPASESHSFPAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787126, Length=357, Percent_Identity=23.8095238095238, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42568; Mature: 42437

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLYFFILVLLVSISGFSQGMLLPVISVIFETNGESAAINGLHATGLYIGVLLASPFME
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHCHHHH
APLRKLGFKPLMVMGGFLVIISLFSFIWLQSIWLWFFLRLLIGIGDHMLHFSTQTWVTSK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEECHHHEEECC
STPRNRGRNISLYGLSFGLGFAVGPFMVPLVKTSPSLPFIVSGCISLAAWLFVFVLRNEY
CCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PAQGPDETSGDNSAKRFYRALLFGWVAFLPAFGYGFLETALNGSFPVYALRLGISVDAVA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHEEECCCHHHHH
LILPAFAIGSIVFQFPLGLLSDRFGRKRVLLVILLTGALCFLTAGLFPSPSVIGGCFFTA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
GMAVGSMFSLGISYMSDLLPSHLLPAGNLLCGISFSLGSMIGPVAGGWYMQRFESANLFY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHCHHHHHHHCCCCHHH
FITVILVCIWLALVFGKTKHSPASESHSFPAS
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRLYFFILVLLVSISGFSQGMLLPVISVIFETNGESAAINGLHATGLYIGVLLASPFME
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHCHHHH
APLRKLGFKPLMVMGGFLVIISLFSFIWLQSIWLWFFLRLLIGIGDHMLHFSTQTWVTSK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEECHHHEEECC
STPRNRGRNISLYGLSFGLGFAVGPFMVPLVKTSPSLPFIVSGCISLAAWLFVFVLRNEY
CCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PAQGPDETSGDNSAKRFYRALLFGWVAFLPAFGYGFLETALNGSFPVYALRLGISVDAVA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHEEECCCHHHHH
LILPAFAIGSIVFQFPLGLLSDRFGRKRVLLVILLTGALCFLTAGLFPSPSVIGGCFFTA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
GMAVGSMFSLGISYMSDLLPSHLLPAGNLLCGISFSLGSMIGPVAGGWYMQRFESANLFY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHCHHHHHHHCCCCHHH
FITVILVCIWLALVFGKTKHSPASESHSFPAS
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]