| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
Click here to switch to the map view.
The map label for this gene is yfkK
Identifier: 154685264
GI number: 154685264
Start: 802315
End: 802530
Strand: Reverse
Name: yfkK
Synonym: RBAM_008100
Alternate gene names: NA
Gene position: 802530-802315 (Counterclockwise)
Preceding gene: 154685268
Following gene: 154685263
Centisome position: 20.48
GC content: 40.28
Gene sequence:
>216_bases TTGCCGAGCCAACAAACAGAAACGTTAAACAAAATGATTGAAGATATTTCGCAAAAGCTCAACATGCTCAATGTCGGCGT CATAAGAGCGGAAGATTTCAGTGATGAAAAAATAGAAGATCTTACATACCTTCATCAAATGGTCATGAAAAAAACATCAT TCAGCCCGAGTGAAATGCAGGCCATTGCCGAGGAGCTCGCCTCTCTCAGAAAATAA
Upstream 100 bases:
>100_bases ATCTTAGCAACTTTTCTGCTGCTGTGGAAATAAGCTTTTATTCTAAATGAATTCTGTTAGAATAAAGGGTACGAAAACGG TCATGAAAGGATGCATGAAT
Downstream 100 bases:
>100_bases ACCCGTGTCAGACCTGCCGAAAAACGGCGGGTCTTTTTTTGATTTAAAAAAGTAAAAAATAAAAGTTCATCGGTTTGACA CATATAAAAAGAAGGAGTAT
Product: YfkK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MPSQQTETLNKMIEDISQKLNMLNVGVIRAEDFSDEKIEDLTYLHQMVMKKTSFSPSEMQAIAEELASLRK
Sequences:
>Translated_71_residues MPSQQTETLNKMIEDISQKLNMLNVGVIRAEDFSDEKIEDLTYLHQMVMKKTSFSPSEMQAIAEELASLRK >Mature_70_residues PSQQTETLNKMIEDISQKLNMLNVGVIRAEDFSDEKIEDLTYLHQMVMKKTSFSPSEMQAIAEELASLRK
Specific function: Unknown
COG id: COG4840
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0435 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y810_BACA2 (A7Z2G8)
Other databases:
- EMBL: CP000560 - RefSeq: YP_001420425.1 - STRING: A7Z2G8 - EnsemblBacteria: EBBACT00000005262 - GeneID: 5462834 - GenomeReviews: CP000560_GR - KEGG: bay:RBAM_008100 - eggNOG: COG4840 - GeneTree: EBGT00050000001833 - HOGENOM: HBG313979 - OMA: SEEWYDE - ProtClustDB: CLSK886871 - BioCyc: BAMY326423:RBAM_008100-MONOMER - HAMAP: MF_00829 - InterPro: IPR009507
Pfam domain/function: PF06569 DUF1128
EC number: NA
Molecular weight: Translated: 8163; Mature: 8031
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.5 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSQQTETLNKMIEDISQKLNMLNVGVIRAEDFSDEKIEDLTYLHQMVMKKTSFSPSEMQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH AIAEELASLRK HHHHHHHHHCC >Mature Secondary Structure PSQQTETLNKMIEDISQKLNMLNVGVIRAEDFSDEKIEDLTYLHQMVMKKTSFSPSEMQ CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH AIAEELASLRK HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA