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The map label for this gene is ydeK [H]

Identifier: 154685047

GI number: 154685047

Start: 562307

End: 563191

Strand: Reverse

Name: ydeK [H]

Synonym: RBAM_005850

Alternate gene names: 154685047

Gene position: 563191-562307 (Counterclockwise)

Preceding gene: 154685049

Following gene: 154685045

Centisome position: 14.37

GC content: 56.72

Gene sequence:

>885_bases
ATGAAGAAAGCCGCAAACGGCTGGATTAACGGATTTATCGGCGTGCTCATTTTCAGCGGCTCGCTTCCCGCGACCCGCTT
GGCTGTAGCGGACTTTGACCCGGTATTTCTCACCGTATGCCGCGCCGCGATAGCCGGTATATTGGCAGGCGCTCTGCTCC
TCATTTTTCAGGAGAAACGCCCTGCCAAAAGCGACATCATTTCACTAATAACAGTAGCGCTCGGCGTCGTGATCGGTTTC
CCGCTGCTTACAGCCTTAGCGCTTCAGCATGTCACATCCGCTCATGCCATTGTCTACATCGGACTTCTCCCGCTTGCGAC
GGCGATCTTCGGCGTACTGCGAGGAGGCGAACGGCCCAGGCCGGTCTTTTGGATTTTCTCGGCTGCCGGCAGCATCCTCG
TAGCCGGATATGCTCTGCTGCAAGGAGGAGAATCCTCTCCGCTCGGTGATACGTACATGATCGCTTCGATTATCGTGTGC
GGTCTCGGTTATGCCGAAGGCGCCCGCCTCTCCCGGCGGCTTGGCAACTGGCAGGTGATCTCTTGGGCACTCGTTTTATC
GCTTCCCCTTATGTTCATCCTGTCTTTCTGCTTCATGCCGGACTCATGGTCAAACATCGGCGCGCCCGCACTGCTCAGTC
TTGCATATGTCTCAATATTCAGCATGCTGATCGGCTTCGTATTCTGGTATCGCGGACTCGCCCAGGGAGGCATCGCCGCG
GTCGGACAGCTGCAGCTTCTGCAGCCTTTCTTCGGACTGTTGCTGGCCGCCATGATTCTCCATGAAAAAGCAGGATGGGA
ACTTGCGGCGGTGAATGTCGGCGTTATCGCTTGCGTGGCGGCCGCCCGGCAGTTCGCAAATCAATCAGAAAAGGCCGAAC
AATGA

Upstream 100 bases:

>100_bases
TCTTTTTATAAAAACTGGCCATTTGTATAAGGCCAATTTCAGTTTATAGTCATTATAAACTTTGAAAATGGGTTTAGAAA
TATATATTGGAGTGATTGGA

Downstream 100 bases:

>100_bases
ACTTGTTCGGCCTTTTCATTATATTCCGCCCATAGGCAGCAGAAGTCTGTATCTCTTTCACATGATCCGGCTATTTTTCA
GGCAGGCTGAACTCCCTTAA

Product: YdeK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKKAANGWINGFIGVLIFSGSLPATRLAVADFDPVFLTVCRAAIAGILAGALLLIFQEKRPAKSDIISLITVALGVVIGF
PLLTALALQHVTSAHAIVYIGLLPLATAIFGVLRGGERPRPVFWIFSAAGSILVAGYALLQGGESSPLGDTYMIASIIVC
GLGYAEGARLSRRLGNWQVISWALVLSLPLMFILSFCFMPDSWSNIGAPALLSLAYVSIFSMLIGFVFWYRGLAQGGIAA
VGQLQLLQPFFGLLLAAMILHEKAGWELAAVNVGVIACVAAARQFANQSEKAEQ

Sequences:

>Translated_294_residues
MKKAANGWINGFIGVLIFSGSLPATRLAVADFDPVFLTVCRAAIAGILAGALLLIFQEKRPAKSDIISLITVALGVVIGF
PLLTALALQHVTSAHAIVYIGLLPLATAIFGVLRGGERPRPVFWIFSAAGSILVAGYALLQGGESSPLGDTYMIASIIVC
GLGYAEGARLSRRLGNWQVISWALVLSLPLMFILSFCFMPDSWSNIGAPALLSLAYVSIFSMLIGFVFWYRGLAQGGIAA
VGQLQLLQPFFGLLLAAMILHEKAGWELAAVNVGVIACVAAARQFANQSEKAEQ
>Mature_294_residues
MKKAANGWINGFIGVLIFSGSLPATRLAVADFDPVFLTVCRAAIAGILAGALLLIFQEKRPAKSDIISLITVALGVVIGF
PLLTALALQHVTSAHAIVYIGLLPLATAIFGVLRGGERPRPVFWIFSAAGSILVAGYALLQGGESSPLGDTYMIASIIVC
GLGYAEGARLSRRLGNWQVISWALVLSLPLMFILSFCFMPDSWSNIGAPALLSLAYVSIFSMLIGFVFWYRGLAQGGIAA
VGQLQLLQPFFGLLLAAMILHEKAGWELAAVNVGVIACVAAARQFANQSEKAEQ

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31122; Mature: 31122

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAANGWINGFIGVLIFSGSLPATRLAVADFDPVFLTVCRAAIAGILAGALLLIFQEKR
CCCCHHHHHHHHHHHHHCCCCCCHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAKSDIISLITVALGVVIGFPLLTALALQHVTSAHAIVYIGLLPLATAIFGVLRGGERPR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PVFWIFSAAGSILVAGYALLQGGESSPLGDTYMIASIIVCGLGYAEGARLSRRLGNWQVI
CEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHH
SWALVLSLPLMFILSFCFMPDSWSNIGAPALLSLAYVSIFSMLIGFVFWYRGLAQGGIAA
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VGQLQLLQPFFGLLLAAMILHEKAGWELAAVNVGVIACVAAARQFANQSEKAEQ
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKKAANGWINGFIGVLIFSGSLPATRLAVADFDPVFLTVCRAAIAGILAGALLLIFQEKR
CCCCHHHHHHHHHHHHHCCCCCCHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAKSDIISLITVALGVVIGFPLLTALALQHVTSAHAIVYIGLLPLATAIFGVLRGGERPR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PVFWIFSAAGSILVAGYALLQGGESSPLGDTYMIASIIVCGLGYAEGARLSRRLGNWQVI
CEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHH
SWALVLSLPLMFILSFCFMPDSWSNIGAPALLSLAYVSIFSMLIGFVFWYRGLAQGGIAA
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VGQLQLLQPFFGLLLAAMILHEKAGWELAAVNVGVIACVAAARQFANQSEKAEQ
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]