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The map label for this gene is yvaD [H]

Identifier: 154684939

GI number: 154684939

Start: 467600

End: 468007

Strand: Reverse

Name: yvaD [H]

Synonym: RBAM_004700

Alternate gene names: 154684939

Gene position: 468007-467600 (Counterclockwise)

Preceding gene: 154684940

Following gene: 154684938

Centisome position: 11.94

GC content: 36.52

Gene sequence:

>408_bases
ATGATGAAAGGGTTAAAGGTTCTCTTCCTCATTACAGATATTGGATTTATCGTTTATTGGATTGTTACTTTTTTTGAGTG
GATTCCAAAAAATATGGTGTTTAAAGATTATGATAACGCCATGATCATGGCCTGGAACTGGTCATTCTTTCCCTTAGATA
TTTTCATTTCGATAACCGGGCTGTACAGCTTGTTTCTTTATAAACGGAAACATGCGTTATGGCGCCCTTTCGCATTAATA
TCACTTGTACTGACCTTTTGTTCAGGCCTGCAAGCGATTGCCTTTTGGGTATTTATCGGTGATTTTGATCTTATGTGGTG
GGCATTCAATCTGTACTTGCTTCTTTATCCTTTATATTTTATTCGGAAATTGCTGGTCTCTCGTAAAAATAGCTGTCATT
CTTTTTGA

Upstream 100 bases:

>100_bases
TCTCTGTTCTTCTGATCATCATCGGTGTCGTTTCCTTAAACTTTATTTCTGAAAGTGAAACGTCATCAAACGGCATCAGC
GTTCATACGGACAGAAACAG

Downstream 100 bases:

>100_bases
TGAGGCGGTTTTCTTTTTCTTCAGGCGGGAAACACTTTTCATAAAGGAGTGATAGACATGCCTTGGTCTATGAAGGATTA
TCCGCAATCATTGAAGAATC

Product: YvaD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MMKGLKVLFLITDIGFIVYWIVTFFEWIPKNMVFKDYDNAMIMAWNWSFFPLDIFISITGLYSLFLYKRKHALWRPFALI
SLVLTFCSGLQAIAFWVFIGDFDLMWWAFNLYLLLYPLYFIRKLLVSRKNSCHSF

Sequences:

>Translated_135_residues
MMKGLKVLFLITDIGFIVYWIVTFFEWIPKNMVFKDYDNAMIMAWNWSFFPLDIFISITGLYSLFLYKRKHALWRPFALI
SLVLTFCSGLQAIAFWVFIGDFDLMWWAFNLYLLLYPLYFIRKLLVSRKNSCHSF
>Mature_135_residues
MMKGLKVLFLITDIGFIVYWIVTFFEWIPKNMVFKDYDNAMIMAWNWSFFPLDIFISITGLYSLFLYKRKHALWRPFALI
SLVLTFCSGLQAIAFWVFIGDFDLMWWAFNLYLLLYPLYFIRKLLVSRKNSCHSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020348
- ProDom:   PD082409 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16289; Mature: 16289

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKGLKVLFLITDIGFIVYWIVTFFEWIPKNMVFKDYDNAMIMAWNWSFFPLDIFISITG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEEECCCCHHHHHHHHHHH
LYSLFLYKRKHALWRPFALISLVLTFCSGLQAIAFWVFIGDFDLMWWAFNLYLLLYPLYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IRKLLVSRKNSCHSF
HHHHHHHCCCCCCCC
>Mature Secondary Structure
MMKGLKVLFLITDIGFIVYWIVTFFEWIPKNMVFKDYDNAMIMAWNWSFFPLDIFISITG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEEECCCCHHHHHHHHHHH
LYSLFLYKRKHALWRPFALISLVLTFCSGLQAIAFWVFIGDFDLMWWAFNLYLLLYPLYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IRKLLVSRKNSCHSF
HHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]