Click here to switch to the map view.

The map label for this gene is ydaT [H]

Identifier: 154684938

GI number: 154684938

Start: 467318

End: 467542

Strand: Reverse

Name: ydaT [H]

Synonym: RBAM_004690

Alternate gene names: 154684938

Gene position: 467542-467318 (Counterclockwise)

Preceding gene: 154684939

Following gene: 154684936

Centisome position: 11.93

GC content: 44.0

Gene sequence:

>225_bases
ATGCCTTGGTCTATGAAGGATTATCCGCAATCATTGAAGAATCTCGAGGAACCTGTGAAGAAAAAAGCGATCGAAATCGC
GAATGCGATGGTAGATGAGGGTTATGAAGAAGGACGGGCCATTCCCATTGCGACAAGTCAGGCGAAAGAGTGGAAAAAAA
ACGCTTCTAAGGAAGAAATCGATCAGCTGATGAAACACGATGATGAAACGAAACGCGGAAATTGA

Upstream 100 bases:

>100_bases
GAAATTGCTGGTCTCTCGTAAAAATAGCTGTCATTCTTTTTGATGAGGCGGTTTTCTTTTTCTTCAGGCGGGAAACACTT
TTCATAAAGGAGTGATAGAC

Downstream 100 bases:

>100_bases
ATCGGAATAAAGGAAAAACCCCGCTCTCAAGAGAACGAGGTTTTTCTGATTATAAACCGTAATAATAAGATAGCGTGGTG
ACTGAAACGTAGCCTGTCGC

Product: YdaT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 73

Protein sequence:

>74_residues
MPWSMKDYPQSLKNLEEPVKKKAIEIANAMVDEGYEEGRAIPIATSQAKEWKKNASKEEIDQLMKHDDETKRGN

Sequences:

>Translated_74_residues
MPWSMKDYPQSLKNLEEPVKKKAIEIANAMVDEGYEEGRAIPIATSQAKEWKKNASKEEIDQLMKHDDETKRGN
>Mature_73_residues
PWSMKDYPQSLKNLEEPVKKKAIEIANAMVDEGYEEGRAIPIATSQAKEWKKNASKEEIDQLMKHDDETKRGN

Specific function: Unknown

COG id: COG4876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018691 [H]

Pfam domain/function: PF09954 DUF2188 [H]

EC number: NA

Molecular weight: Translated: 8520; Mature: 8388

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPWSMKDYPQSLKNLEEPVKKKAIEIANAMVDEGYEEGRAIPIATSQAKEWKKNASKEEI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHH
DQLMKHDDETKRGN
HHHHHCCCCCCCCC
>Mature Secondary Structure 
PWSMKDYPQSLKNLEEPVKKKAIEIANAMVDEGYEEGRAIPIATSQAKEWKKNASKEEI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHH
DQLMKHDDETKRGN
HHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]