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The map label for this gene is nin [H]

Identifier: 154684829

GI number: 154684829

Start: 339028

End: 339426

Strand: Reverse

Name: nin [H]

Synonym: RBAM_003600

Alternate gene names: 154684829

Gene position: 339426-339028 (Counterclockwise)

Preceding gene: 154684830

Following gene: 154684822

Centisome position: 8.66

GC content: 42.36

Gene sequence:

>399_bases
TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGGGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTTCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTCATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCCGATACGTATATTATTGATGCAGCCGCAATGTAA

Upstream 100 bases:

>100_bases
ACCGCGGAGCCGGCTCTTGGGTCGGACACCAGCTTACCAATGATCCCGACGGAACGAGAGTATTATTTAAAATCAAGTAA
AAAACAGGAGGAACAGCGCA

Downstream 100 bases:

>100_bases
AAGAAATCCCTGAGAGAATCATATTTCTCTCAGGGAACTTTTATAAACTTTTACCGTTTGTTTCAATTACATTCTGGTAC
CAATAAAAACTTTTTTTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Competence protein J [H]

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLFFHIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Sequences:

>Translated_132_residues
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLFFHIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM
>Mature_132_residues
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLFFHIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Specific function: Plays a role in the competence of cells to be transformed. It inhibits the activity of the DNA-entry nuclease [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020354
- ProDom:   PD081734 [H]

Pfam domain/function: PF11033 ComJ [H]

EC number: NA

Molecular weight: Translated: 14977; Mature: 14977

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIV
CCCCCCCHHEEEEEEEEEEEECCCCCCEEECCHHHHHCCCCCCCCEEEEEECCCCEEEEE
LRLNTSEPVPSYEKKATVPFEAVKDGIEIESVMSKRLFFHIPKGRYSLTCYSVPAEISDL
EEECCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCEEEEECCCCEEEEEEECCCCHHHC
HADTYIIDAAAM
CCCEEEEEEECC
>Mature Secondary Structure
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIV
CCCCCCCHHEEEEEEEEEEEECCCCCCEEECCHHHHHCCCCCCCCEEEEEECCCCEEEEE
LRLNTSEPVPSYEKKATVPFEAVKDGIEIESVMSKRLFFHIPKGRYSLTCYSVPAEISDL
EEECCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCEEEEECCCCEEEEEEECCCCHHHC
HADTYIIDAAAM
CCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2841296; 7704255; 8969502; 9384377; 7746143 [H]