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The map label for this gene is yceB [H]

Identifier: 154684783

GI number: 154684783

Start: 286028

End: 287023

Strand: Reverse

Name: yceB [H]

Synonym: RBAM_003140

Alternate gene names: 154684783

Gene position: 287023-286028 (Counterclockwise)

Preceding gene: 154684794

Following gene: 154684776

Centisome position: 7.32

GC content: 55.02

Gene sequence:

>996_bases
GTGATTGATTTAAGCATACTTGATCAGGCGCCAGTATCCAAAGGAAACGGGCCGCACGAGACGCTCCGCCGTTCCGCGGA
GCTCGCCCGCCTCAGCGAAGGTTGGGGCTATAAGCGGTACTGGTTTGCCGAGCATCACGGCACAAGAGGGCTCGCAAGCG
TTTCGCCGGAAATTATGATCGCTCATACCGCCGCAGCCACAACGTCCATCCGTGTCGGATCAGGCGGCGTGCTGCTGCCG
CAGTACAGCCCTTATAAAGTCGCGGAAACTTTCCGTCAGCTTGAGGCGCTGCATCCGAACCGGATTGACCTCGGGGTCGG
ACGCTCACCGGGCGGTACAACGAAAATCCGGCTCGCCCTCACAGACGGGGTAAAGAAAAGCATGACCGAGTTCAACAGGC
AGCTTCAGGATTTATCATCCTTTCTGACAGATTCGGTTCCCTCGGACCATGCTTATGCAGGAATAAAAACAGCGCCTTTG
ATTGAAACAGCCCCGCAGCTTTGGGTGCTCGGCCTCGGGGAAAACAGCGCCAGACGCGCCGCTCTTCAAGGTGCGGGCTA
TGTCTTCGGCCATTTCATTAATCCGGAACGCGGGGAAAAAGCTTTTCAGATCTATCGGGACCATTTCCGGGCCTCCGCCC
ATTTTTCCGCTCCCGCCTCGCTCTGTGCCATTTTCGTCATATGCGCGGCTACGGATGAGAAAGCGGAAGAACTCGCCTTA
AGCCAGGATTTATGGCTTCTTCGTGTCGGAAAAGGCGCCGACAGCCGCGTGCCGAGTGTGGAGGAAGCGAAGGCTTATCC
GTATTCGCCGGAGGACCGTAAACAGATAGAAGAAAACAGGAAGCGGATGGTGATCGGCTCTCCTGCCGCAGTGAAACGCC
GTCTGCTTGAACTTTCCGAGCGGTATCAGACAAAAGAGATGATGGTGCTGTGCAACGTCTTTGATTTCGAAGCAAAAAAA
GAGTCATATGAGCGTCTTGCTGATATATTTCTGTAA

Upstream 100 bases:

>100_bases
CTCCTTCGTTCCGGAGAGAATAGAGAAAACAAAGAAATTGACGGGGACTGAACATTTTTCCTATCCTTGTATCAATACAT
GTCAGGAAAGGGGCAGACGA

Downstream 100 bases:

>100_bases
AAAAAAGCCGTCAAACGGAGCAGCAGATGAGACTGCTGCACCGCTTAACGGCGGTTTTTTCGTTCTTTTCCTTTTTTAAA
CGCATTCCAAATCCCCTGCA

Product: YceB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MIDLSILDQAPVSKGNGPHETLRRSAELARLSEGWGYKRYWFAEHHGTRGLASVSPEIMIAHTAAATTSIRVGSGGVLLP
QYSPYKVAETFRQLEALHPNRIDLGVGRSPGGTTKIRLALTDGVKKSMTEFNRQLQDLSSFLTDSVPSDHAYAGIKTAPL
IETAPQLWVLGLGENSARRAALQGAGYVFGHFINPERGEKAFQIYRDHFRASAHFSAPASLCAIFVICAATDEKAEELAL
SQDLWLLRVGKGADSRVPSVEEAKAYPYSPEDRKQIEENRKRMVIGSPAAVKRRLLELSERYQTKEMMVLCNVFDFEAKK
ESYERLADIFL

Sequences:

>Translated_331_residues
MIDLSILDQAPVSKGNGPHETLRRSAELARLSEGWGYKRYWFAEHHGTRGLASVSPEIMIAHTAAATTSIRVGSGGVLLP
QYSPYKVAETFRQLEALHPNRIDLGVGRSPGGTTKIRLALTDGVKKSMTEFNRQLQDLSSFLTDSVPSDHAYAGIKTAPL
IETAPQLWVLGLGENSARRAALQGAGYVFGHFINPERGEKAFQIYRDHFRASAHFSAPASLCAIFVICAATDEKAEELAL
SQDLWLLRVGKGADSRVPSVEEAKAYPYSPEDRKQIEENRKRMVIGSPAAVKRRLLELSERYQTKEMMVLCNVFDFEAKK
ESYERLADIFL
>Mature_331_residues
MIDLSILDQAPVSKGNGPHETLRRSAELARLSEGWGYKRYWFAEHHGTRGLASVSPEIMIAHTAAATTSIRVGSGGVLLP
QYSPYKVAETFRQLEALHPNRIDLGVGRSPGGTTKIRLALTDGVKKSMTEFNRQLQDLSSFLTDSVPSDHAYAGIKTAPL
IETAPQLWVLGLGENSARRAALQGAGYVFGHFINPERGEKAFQIYRDHFRASAHFSAPASLCAIFVICAATDEKAEELAL
SQDLWLLRVGKGADSRVPSVEEAKAYPYSPEDRKQIEENRKRMVIGSPAAVKRRLLELSERYQTKEMMVLCNVFDFEAKK
ESYERLADIFL

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

Organism=Escherichia coli, GI1789551, Length=328, Percent_Identity=31.7073170731707, Blast_Score=190, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 36725; Mature: 36725

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLSILDQAPVSKGNGPHETLRRSAELARLSEGWGYKRYWFAEHHGTRGLASVSPEIMI
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEE
AHTAAATTSIRVGSGGVLLPQYSPYKVAETFRQLEALHPNRIDLGVGRSPGGTTKIRLAL
EEECCCEEEEEECCCCEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEEE
TDGVKKSMTEFNRQLQDLSSFLTDSVPSDHAYAGIKTAPLIETAPQLWVLGLGENSARRA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCEEEEECCCCHHHHH
ALQGAGYVFGHFINPERGEKAFQIYRDHFRASAHFSAPASLCAIFVICAATDEKAEELAL
HHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
SQDLWLLRVGKGADSRVPSVEEAKAYPYSPEDRKQIEENRKRMVIGSPAAVKRRLLELSE
HCCEEEEEECCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHH
RYQTKEMMVLCNVFDFEAKKESYERLADIFL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDLSILDQAPVSKGNGPHETLRRSAELARLSEGWGYKRYWFAEHHGTRGLASVSPEIMI
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEE
AHTAAATTSIRVGSGGVLLPQYSPYKVAETFRQLEALHPNRIDLGVGRSPGGTTKIRLAL
EEECCCEEEEEECCCCEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEEE
TDGVKKSMTEFNRQLQDLSSFLTDSVPSDHAYAGIKTAPLIETAPQLWVLGLGENSARRA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCEEEEECCCCHHHHH
ALQGAGYVFGHFINPERGEKAFQIYRDHFRASAHFSAPASLCAIFVICAATDEKAEELAL
HHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
SQDLWLLRVGKGADSRVPSVEEAKAYPYSPEDRKQIEENRKRMVIGSPAAVKRRLLELSE
HCCEEEEEECCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHH
RYQTKEMMVLCNVFDFEAKKESYERLADIFL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274031; 9384377 [H]