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The map label for this gene is oruR [H]

Identifier: 154248611

GI number: 154248611

Start: 5203640

End: 5204692

Strand: Direct

Name: oruR [H]

Synonym: Xaut_4693

Alternate gene names: 154248611

Gene position: 5203640-5204692 (Clockwise)

Preceding gene: 154248610

Following gene: 154248612

Centisome position: 98.02

GC content: 70.85

Gene sequence:

>1053_bases
ATGTGGGATCGCAACCCGGTGCGCACCTCACTCGTGCACATGCTGCCCACGGTCGCGGACCGGCATGGCTTGCCGCTGCC
GCCGCTCCTGACCAAGGCGGGGCTTCCACCGGAGGAGGCGTTCACGGGCGATGTGGTCGCCCGCGCCCAGATCTGCACCC
TGCTCGCCCATCTGGCGCAGCAGGCTGGCGACCCGACGATCGGCCTGGATCTGGGAGCCATGGGCGATCCGGCCCTGCTG
GGCATGACGGGGCGCGCGCTTTTCGCCGGCCGCACCCTGCGTGAATGCCTGGCAGCTCTGGCCCGGCAGATGCCAAGCCT
GCAAGGCGGCGTGGCCCTTTGGGTGGACGAGCGAGACGGCGTCGCCCGCTGGGGCCAATGCATGGCGGACAGCGATCGCG
GGCACGCAAGGGTGCTCAATGAGGGGGTCGCGGCCTTCATGGCAAAAGCAGTCAGGGCCATTGCCGGGATGGAGCCCGAG
CATCTGGGCGTCAGCCTTCCCCATCGCGCGCAGGCGCCAATCCGGGTGTATGAAGACAAGCTCGCTTCCCGCCTGAGTTT
CGGAACGGGCGACGGTGTCGCGCTGACCTTCGACGCGGCATGGCTGGATCGGCCGAACCTTCTGATGGCCGTTGCGCCGC
CGGAGACCGACGCCGGCCGGCCTGACCTTGCCCACCGTGTCGCAGGCGATGCCGTGTGGCGGGACGATGGGGCCCTGCTC
GGCGCCGTCTTGCGCCTCGTCGAGGGGGCCGCGCTCAGCGGCGCGCTGGGCCTTGCCGACACGGCCCGCAGCCTCGGCAT
TTCGCCGCGCAGCCTCCAGCGTCGCCTCGCCGGCCTCGGCACTTCCTTCGAGACTTGCGTCGATGAATGGCGCCACCGGC
AGGCGCGTCGCTATCTTATGGATGCGGAGCTGCCGGTCGGGTCCATTGGCCGGGCGCTCGGCTACAGCCATCCGGCGCAT
TTCGTGAGGGCCTTCCGGCGCTGGGAAGGCCACACCCCGCTCTCCTTCCGGCGGGCCGCCAGAGCCGGAGGGGGCGCGGG
CTCCCAACGGTAG

Upstream 100 bases:

>100_bases
TGCCTGCACCCGGTGGTTTCATAAGCGCGATCAGGACGAAGATGGCGGACCGGCGGCCGGATCGTCGTCGCACCATCGCG
ACCACGGAGTCCGCCAGCCC

Downstream 100 bases:

>100_bases
GGTGCCATGGGCAACCCCGGGGCCGGCCGATAACCATAGGTAAAGCCCGCCGATTCGAGCGCGGCGTCAGGCCAATCGGC
GCGGCTGTTTCGCACTTGGT

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MWDRNPVRTSLVHMLPTVADRHGLPLPPLLTKAGLPPEEAFTGDVVARAQICTLLAHLAQQAGDPTIGLDLGAMGDPALL
GMTGRALFAGRTLRECLAALARQMPSLQGGVALWVDERDGVARWGQCMADSDRGHARVLNEGVAAFMAKAVRAIAGMEPE
HLGVSLPHRAQAPIRVYEDKLASRLSFGTGDGVALTFDAAWLDRPNLLMAVAPPETDAGRPDLAHRVAGDAVWRDDGALL
GAVLRLVEGAALSGALGLADTARSLGISPRSLQRRLAGLGTSFETCVDEWRHRQARRYLMDAELPVGSIGRALGYSHPAH
FVRAFRRWEGHTPLSFRRAARAGGGAGSQR

Sequences:

>Translated_350_residues
MWDRNPVRTSLVHMLPTVADRHGLPLPPLLTKAGLPPEEAFTGDVVARAQICTLLAHLAQQAGDPTIGLDLGAMGDPALL
GMTGRALFAGRTLRECLAALARQMPSLQGGVALWVDERDGVARWGQCMADSDRGHARVLNEGVAAFMAKAVRAIAGMEPE
HLGVSLPHRAQAPIRVYEDKLASRLSFGTGDGVALTFDAAWLDRPNLLMAVAPPETDAGRPDLAHRVAGDAVWRDDGALL
GAVLRLVEGAALSGALGLADTARSLGISPRSLQRRLAGLGTSFETCVDEWRHRQARRYLMDAELPVGSIGRALGYSHPAH
FVRAFRRWEGHTPLSFRRAARAGGGAGSQR
>Mature_350_residues
MWDRNPVRTSLVHMLPTVADRHGLPLPPLLTKAGLPPEEAFTGDVVARAQICTLLAHLAQQAGDPTIGLDLGAMGDPALL
GMTGRALFAGRTLRECLAALARQMPSLQGGVALWVDERDGVARWGQCMADSDRGHARVLNEGVAAFMAKAVRAIAGMEPE
HLGVSLPHRAQAPIRVYEDKLASRLSFGTGDGVALTFDAAWLDRPNLLMAVAPPETDAGRPDLAHRVAGDAVWRDDGALL
GAVLRLVEGAALSGALGLADTARSLGISPRSLQRRLAGLGTSFETCVDEWRHRQARRYLMDAELPVGSIGRALGYSHPAH
FVRAFRRWEGHTPLSFRRAARAGGGAGSQR

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37373; Mature: 37373

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWDRNPVRTSLVHMLPTVADRHGLPLPPLLTKAGLPPEEAFTGDVVARAQICTLLAHLAQ
CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHH
QAGDPTIGLDLGAMGDPALLGMTGRALFAGRTLRECLAALARQMPSLQGGVALWVDERDG
HCCCCCEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
VARWGQCMADSDRGHARVLNEGVAAFMAKAVRAIAGMEPEHLGVSLPHRAQAPIRVYEDK
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHH
LASRLSFGTGDGVALTFDAAWLDRPNLLMAVAPPETDAGRPDLAHRVAGDAVWRDDGALL
HHHHHCCCCCCCEEEEEEHHHCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCHHHH
GAVLRLVEGAALSGALGLADTARSLGISPRSLQRRLAGLGTSFETCVDEWRHRQARRYLM
HHHHHHHHCCHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
DAELPVGSIGRALGYSHPAHFVRAFRRWEGHTPLSFRRAARAGGGAGSQR
HCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MWDRNPVRTSLVHMLPTVADRHGLPLPPLLTKAGLPPEEAFTGDVVARAQICTLLAHLAQ
CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHH
QAGDPTIGLDLGAMGDPALLGMTGRALFAGRTLRECLAALARQMPSLQGGVALWVDERDG
HCCCCCEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
VARWGQCMADSDRGHARVLNEGVAAFMAKAVRAIAGMEPEHLGVSLPHRAQAPIRVYEDK
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHH
LASRLSFGTGDGVALTFDAAWLDRPNLLMAVAPPETDAGRPDLAHRVAGDAVWRDDGALL
HHHHHCCCCCCCEEEEEEHHHCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCHHHH
GAVLRLVEGAALSGALGLADTARSLGISPRSLQRRLAGLGTSFETCVDEWRHRQARRYLM
HHHHHHHHCCHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
DAELPVGSIGRALGYSHPAHFVRAFRRWEGHTPLSFRRAARAGGGAGSQR
HCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]