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The map label for this gene is xoxF [H]

Identifier: 154248605

GI number: 154248605

Start: 5192391

End: 5194214

Strand: Direct

Name: xoxF [H]

Synonym: Xaut_4686

Alternate gene names: 154248605

Gene position: 5192391-5194214 (Clockwise)

Preceding gene: 154248603

Following gene: 154248609

Centisome position: 97.8

GC content: 67.65

Gene sequence:

>1824_bases
ATGCGCGCAATGCTGACAGCGAAATCCCTTGCCGTAGCGACCGCCGCCGCGCTCCTCGGATTGGCCCCGGCCCATGCCAA
CGACGACGTGCTGAAACGCATCGCAGATCCGGCGGGCCAGGTGCTCCAGACAATCGACTACGCCAACACGCGCTATTCCC
GCCTCGACCAGATCAACGCCGCCAACGTGGGCAAGCTTGCGGTGGCCTGGACCTTCTCCACCGGCGTGCTGCGCGGCCAT
GAGGGCAGCCCGCTGGTCGTGGACGGGGTGATGTATGTCCACACCCCCTTCCCCAACATCGTCTATGCGCTGGATCTCGA
TCACGACGGCCGCATCCTGTGGAAGTACGAGCCCAAGCAGGGCCGCGCCGTCACCGCCATCATGTGCTGCGACCTGATCA
ACCGCGGCCTCGCCTATGCCGAGGGCATGGTGTTCTTGCACCAGGCCGACACCACCATCGTCGCGCTCGACGCCAAAACC
GGCGCGGTGCGCTGGAAGGTCGCCAACGGCGATCCGAAAAAGGGGGAATCCAGCACCGCCACCGTCATGCCGGTGAAGGA
CAAGCTGATCGTCGGCATCGCCGGCGCGGAGTTCGGCGCGCGCGGGCACATCAGCGCCTACAACCTGAAGGACGGCACCC
TCGCCTGGCGGGCCTACAGCACCGGCCCCGACGCCGAGATGCTGCTGGATCCGCGCAAGACCACCGAGCTGGGCAAGCCG
GTGGGCGCAGATTCCTCGCTGAAGAGCTGGCAGGGCGACCAATGGAAGATCGGCGGTGGCGCCCCGTGGGGCTGGTTCGC
CTACGACCCGAAGCTCAACCTCGTCTATTACGGCAGCGCCAATCCCTCCACCTGGAACCCGTCTCAGCGCCCCGGCGACA
ACAAATGGTCCGACACCATCTTCGCCCGCGATGCCGACACCGGCGTCGCCCGCTGGGTCTACCAGATGACGCCCCACGAC
CAGTGGGACTTCGACGGCGTCAACGAGATGATCCTCACCGACCAGATGGTGGACGGCCAAGCGCGCGCGCTGCTCACCCA
TTTCGACCGTAACGGCTTCGCCTACACAATCGACCGCGCCACCGGCGCACTGCTTGGGGCGGAAAAGTTCGACCCGACCG
TCAACTGGGCCGCCGGCATCGACATGGACCCGGCGAGCCCCACCTACGGCCGACCCCTCCTCGATCCGGCCCACGGCACC
GAGGCGAAAGGCGAGGACGAGACCTACACCGGCATCTGCCCCGCCGCCCTCGGCGCCAAGAACCAGCAGCCGGCAGCCTA
TTCCCCGAAAACCGGCCTGTTCTACGTGCCCACCAACCACCTGTGCATGGACTACGAGCCGTTCCACGTGGACTACACCC
CCGGCCAGCCCTATGTGGGGGCGACGCTCACCATGTATCCGGCCCGTGGCGGCGACGGGCGGACGGGCAATTTCATCGCC
TGGGACAATGTGAAGGGCCGCATCGCCTGGTCCGTGCCGGAGCTTTTCTCGGTCTGGTCGGGCGCCCTCGCCACCGCCGG
CGGCGTGGTGTTCTACGGCACGCTGGAGGGCTACCTGAAGGCCGTGGACGCGACGACCGGCAAGGAGCTCTACCGCTTCA
AGACGCCGTCCGGCATCGTCGGCAACGTCATGACCTACACCCATCGCGGCCGGCAATGTGTGGCGGTGCTGTCCGGGATC
GGCGGCTGGGCGGGCATCGGCCTCGCCGCTGGCCTCGCCGACCCCGACGCCGGCTCCGGCGCCAAGGACGCCTACGCCGC
ACTCGACCGCTACACGGCGCTCGGCGGCCAGCTCACCGTCTTCGCGCTGCCTGAGGGGTTTTAG

Upstream 100 bases:

>100_bases
GCGACCTCCGTCGCGGTTCACGCCGGCCGGCCGCATGCTATCCCATCCGGCGAGGGGCTGAGCCGGCCGGTCCAGCCCGC
GCGGGCAGCAGGAGAGGAAC

Downstream 100 bases:

>100_bases
GATCGCGGCAGGCGTCCTCCTGTTCGATTGGGCGGCCAGGGCGCAGGGCAAGACGCGTTCGGATTTCATCCTCGAAGCCG
CTCACCGCGCCGCCAAGCCT

Product: Pyrrolo-quinoline quinone

Products: aldehyde; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 607; Mature: 607

Protein sequence:

>607_residues
MRAMLTAKSLAVATAAALLGLAPAHANDDVLKRIADPAGQVLQTIDYANTRYSRLDQINAANVGKLAVAWTFSTGVLRGH
EGSPLVVDGVMYVHTPFPNIVYALDLDHDGRILWKYEPKQGRAVTAIMCCDLINRGLAYAEGMVFLHQADTTIVALDAKT
GAVRWKVANGDPKKGESSTATVMPVKDKLIVGIAGAEFGARGHISAYNLKDGTLAWRAYSTGPDAEMLLDPRKTTELGKP
VGADSSLKSWQGDQWKIGGGAPWGWFAYDPKLNLVYYGSANPSTWNPSQRPGDNKWSDTIFARDADTGVARWVYQMTPHD
QWDFDGVNEMILTDQMVDGQARALLTHFDRNGFAYTIDRATGALLGAEKFDPTVNWAAGIDMDPASPTYGRPLLDPAHGT
EAKGEDETYTGICPAALGAKNQQPAAYSPKTGLFYVPTNHLCMDYEPFHVDYTPGQPYVGATLTMYPARGGDGRTGNFIA
WDNVKGRIAWSVPELFSVWSGALATAGGVVFYGTLEGYLKAVDATTGKELYRFKTPSGIVGNVMTYTHRGRQCVAVLSGI
GGWAGIGLAAGLADPDAGSGAKDAYAALDRYTALGGQLTVFALPEGF

Sequences:

>Translated_607_residues
MRAMLTAKSLAVATAAALLGLAPAHANDDVLKRIADPAGQVLQTIDYANTRYSRLDQINAANVGKLAVAWTFSTGVLRGH
EGSPLVVDGVMYVHTPFPNIVYALDLDHDGRILWKYEPKQGRAVTAIMCCDLINRGLAYAEGMVFLHQADTTIVALDAKT
GAVRWKVANGDPKKGESSTATVMPVKDKLIVGIAGAEFGARGHISAYNLKDGTLAWRAYSTGPDAEMLLDPRKTTELGKP
VGADSSLKSWQGDQWKIGGGAPWGWFAYDPKLNLVYYGSANPSTWNPSQRPGDNKWSDTIFARDADTGVARWVYQMTPHD
QWDFDGVNEMILTDQMVDGQARALLTHFDRNGFAYTIDRATGALLGAEKFDPTVNWAAGIDMDPASPTYGRPLLDPAHGT
EAKGEDETYTGICPAALGAKNQQPAAYSPKTGLFYVPTNHLCMDYEPFHVDYTPGQPYVGATLTMYPARGGDGRTGNFIA
WDNVKGRIAWSVPELFSVWSGALATAGGVVFYGTLEGYLKAVDATTGKELYRFKTPSGIVGNVMTYTHRGRQCVAVLSGI
GGWAGIGLAAGLADPDAGSGAKDAYAALDRYTALGGQLTVFALPEGF
>Mature_607_residues
MRAMLTAKSLAVATAAALLGLAPAHANDDVLKRIADPAGQVLQTIDYANTRYSRLDQINAANVGKLAVAWTFSTGVLRGH
EGSPLVVDGVMYVHTPFPNIVYALDLDHDGRILWKYEPKQGRAVTAIMCCDLINRGLAYAEGMVFLHQADTTIVALDAKT
GAVRWKVANGDPKKGESSTATVMPVKDKLIVGIAGAEFGARGHISAYNLKDGTLAWRAYSTGPDAEMLLDPRKTTELGKP
VGADSSLKSWQGDQWKIGGGAPWGWFAYDPKLNLVYYGSANPSTWNPSQRPGDNKWSDTIFARDADTGVARWVYQMTPHD
QWDFDGVNEMILTDQMVDGQARALLTHFDRNGFAYTIDRATGALLGAEKFDPTVNWAAGIDMDPASPTYGRPLLDPAHGT
EAKGEDETYTGICPAALGAKNQQPAAYSPKTGLFYVPTNHLCMDYEPFHVDYTPGQPYVGATLTMYPARGGDGRTGNFIA
WDNVKGRIAWSVPELFSVWSGALATAGGVVFYGTLEGYLKAVDATTGKELYRFKTPSGIVGNVMTYTHRGRQCVAVLSGI
GGWAGIGLAAGLADPDAGSGAKDAYAALDRYTALGGQLTVFALPEGF

Specific function: Gdh Is Probably Involved In Energy Conservation Rather Than In Sugar Metabolism. [C]

COG id: COG4993

COG function: function code G; Glucose dehydrogenase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial PQQ dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1786316, Length=380, Percent_Identity=27.1052631578947, Blast_Score=97, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019556
- InterPro:   IPR019551
- InterPro:   IPR018391
- InterPro:   IPR017512
- InterPro:   IPR002372
- InterPro:   IPR011047
- InterPro:   IPR001479 [H]

Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]

EC number: 1.1.99.8

Molecular weight: Translated: 65112; Mature: 65112

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAMLTAKSLAVATAAALLGLAPAHANDDVLKRIADPAGQVLQTIDYANTRYSRLDQINA
CCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCHHHHHHCCCC
ANVGKLAVAWTFSTGVLRGHEGSPLVVDGVMYVHTPFPNIVYALDLDHDGRILWKYEPKQ
CCCCEEEEEEEEECCEEECCCCCCEEEEEEEEEECCCCCEEEEEEECCCCEEEEEECCCC
GRAVTAIMCCDLINRGLAYAEGMVFLHQADTTIVALDAKTGAVRWKVANGDPKKGESSTA
CCEEEHHHHHHHHHCCHHHHCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCE
TVMPVKDKLIVGIAGAEFGARGHISAYNLKDGTLAWRAYSTGPDAEMLLDPRKTTELGKP
EEEEECCEEEEEEECCCCCCCCCEEEEECCCCEEEEEEECCCCCHHEEECCCHHHHCCCC
VGADSSLKSWQGDQWKIGGGAPWGWFAYDPKLNLVYYGSANPSTWNPSQRPGDNKWSDTI
CCCCCCHHHCCCCEEEECCCCCCCCEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCEE
FARDADTGVARWVYQMTPHDQWDFDGVNEMILTDQMVDGQARALLTHFDRNGFAYTIDRA
EEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEHHHCCCHHHEEEEEECCCCEEEEEECC
TGALLGAEKFDPTVNWAAGIDMDPASPTYGRPLLDPAHGTEAKGEDETYTGICPAALGAK
CCCEECCHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHCCC
NQQPAAYSPKTGLFYVPTNHLCMDYEPFHVDYTPGQPYVGATLTMYPARGGDGRTGNFIA
CCCCCCCCCCCCEEEECCCCEEECCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEE
WDNVKGRIAWSVPELFSVWSGALATAGGVVFYGTLEGYLKAVDATTGKELYRFKTPSGIV
ECCCCCEEEECHHHHHHHHHCHHHHCCCEEEEEEHHHHHHHHCCCCCCCEEEEECCCCCC
GNVMTYTHRGRQCVAVLSGIGGWAGIGLAAGLADPDAGSGAKDAYAALDRYTALGGQLTV
CCCEEEECCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEE
FALPEGF
EECCCCC
>Mature Secondary Structure
MRAMLTAKSLAVATAAALLGLAPAHANDDVLKRIADPAGQVLQTIDYANTRYSRLDQINA
CCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCHHHHHHCCCC
ANVGKLAVAWTFSTGVLRGHEGSPLVVDGVMYVHTPFPNIVYALDLDHDGRILWKYEPKQ
CCCCEEEEEEEEECCEEECCCCCCEEEEEEEEEECCCCCEEEEEEECCCCEEEEEECCCC
GRAVTAIMCCDLINRGLAYAEGMVFLHQADTTIVALDAKTGAVRWKVANGDPKKGESSTA
CCEEEHHHHHHHHHCCHHHHCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCE
TVMPVKDKLIVGIAGAEFGARGHISAYNLKDGTLAWRAYSTGPDAEMLLDPRKTTELGKP
EEEEECCEEEEEEECCCCCCCCCEEEEECCCCEEEEEEECCCCCHHEEECCCHHHHCCCC
VGADSSLKSWQGDQWKIGGGAPWGWFAYDPKLNLVYYGSANPSTWNPSQRPGDNKWSDTI
CCCCCCHHHCCCCEEEECCCCCCCCEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCEE
FARDADTGVARWVYQMTPHDQWDFDGVNEMILTDQMVDGQARALLTHFDRNGFAYTIDRA
EEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEHHHCCCHHHEEEEEECCCCEEEEEECC
TGALLGAEKFDPTVNWAAGIDMDPASPTYGRPLLDPAHGTEAKGEDETYTGICPAALGAK
CCCEECCHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHCCC
NQQPAAYSPKTGLFYVPTNHLCMDYEPFHVDYTPGQPYVGATLTMYPARGGDGRTGNFIA
CCCCCCCCCCCCEEEECCCCEEECCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEE
WDNVKGRIAWSVPELFSVWSGALATAGGVVFYGTLEGYLKAVDATTGKELYRFKTPSGIV
ECCCCCEEEECHHHHHHHHHCHHHHCCCEEEEEEHHHHHHHHCCCCCCCEEEEECCCCCC
GNVMTYTHRGRQCVAVLSGIGGWAGIGLAAGLADPDAGSGAKDAYAALDRYTALGGQLTV
CCCEEEECCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEE
FALPEGF
EECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: primary alcohol; acceptor

Specific reaction: a primary alcohol + acceptor = an aldehyde + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1657873 [H]