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The map label for this gene is dksA [H]

Identifier: 154248556

GI number: 154248556

Start: 5127671

End: 5128147

Strand: Reverse

Name: dksA [H]

Synonym: Xaut_4637

Alternate gene names: 154248556

Gene position: 5128147-5127671 (Counterclockwise)

Preceding gene: 154248559

Following gene: 154248554

Centisome position: 96.59

GC content: 63.94

Gene sequence:

>477_bases
ATGCAAGGGTCCAAAGCGACACGGCGCCAGGGTCAGCGACGCATATTGAGGACCTTGCTGATGTCGATCCAAATCGACGA
GGACTATCGGCCCCGCGAGGACGAGCCTTTCATGAATGACAGGCAGCGCGAGTATTTTCGCGTCAAGCTGTTGCGCTGGA
AGGAAGATATCCTGAAGGAGGCCCGCGAGACCCTGCAGCACCTTCAGGACGAGAATCAGAACCATCCCGATCTCGCCGAC
CGGGCCTCGTCCGAGACCGACCGGTCCATCGAGCTGCGCGCCCGCGACCGCCAGCGCAAGCTCATCGCCAAGATCGATGC
CGCGCTCCTGCGGATCGAGGACGGAACCTACGGCTATTGCGAGGATACGGGCGAGCCCATCTCGCTGAAGCGCCTGGAGG
CCCGTCCCATCGCCACCCTCTCGGTGGAGGCGCAGGAGCGGCACGAGCGGCGCGAGCGGGTCTATCGCGACGACTGA

Upstream 100 bases:

>100_bases
CATTCCTGTCCGGGAGGGTCCGGCTCCGCCGGCCAGATCGCCAGGAGGCTGCTTCAGGTCGTTGACGCGGCAAGGTTCGC
CCGGACCCTGCATCCTTGGG

Downstream 100 bases:

>100_bases
CGCCCCGACGGGCGCCGTCTTCGGTTTCATCGCCGCCAATCAAAAGGCCGGCGACGCATGGCGTCGCCGGCCTTTTTTAT
GCGTGGCGTTCGGTTCAGTG

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MQGSKATRRQGQRRILRTLLMSIQIDEDYRPREDEPFMNDRQREYFRVKLLRWKEDILKEARETLQHLQDENQNHPDLAD
RASSETDRSIELRARDRQRKLIAKIDAALLRIEDGTYGYCEDTGEPISLKRLEARPIATLSVEAQERHERRERVYRDD

Sequences:

>Translated_158_residues
MQGSKATRRQGQRRILRTLLMSIQIDEDYRPREDEPFMNDRQREYFRVKLLRWKEDILKEARETLQHLQDENQNHPDLAD
RASSETDRSIELRARDRQRKLIAKIDAALLRIEDGTYGYCEDTGEPISLKRLEARPIATLSVEAQERHERRERVYRDD
>Mature_158_residues
MQGSKATRRQGQRRILRTLLMSIQIDEDYRPREDEPFMNDRQREYFRVKLLRWKEDILKEARETLQHLQDENQNHPDLAD
RASSETDRSIELRARDRQRKLIAKIDAALLRIEDGTYGYCEDTGEPISLKRLEARPIATLSVEAQERHERRERVYRDD

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=146, Percent_Identity=41.7808219178082, Blast_Score=112, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 18965; Mature: 18965

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGSKATRRQGQRRILRTLLMSIQIDEDYRPREDEPFMNDRQREYFRVKLLRWKEDILKE
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ARETLQHLQDENQNHPDLADRASSETDRSIELRARDRQRKLIAKIDAALLRIEDGTYGYC
HHHHHHHHHHCCCCCCCHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
EDTGEPISLKRLEARPIATLSVEAQERHERRERVYRDD
CCCCCCCCCEECCCCCCEEEECCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQGSKATRRQGQRRILRTLLMSIQIDEDYRPREDEPFMNDRQREYFRVKLLRWKEDILKE
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ARETLQHLQDENQNHPDLADRASSETDRSIELRARDRQRKLIAKIDAALLRIEDGTYGYC
HHHHHHHHHHCCCCCCCHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
EDTGEPISLKRLEARPIATLSVEAQERHERRERVYRDD
CCCCCCCCCEECCCCCCEEEECCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9555902 [H]