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The map label for this gene is atoS [C]

Identifier: 154248554

GI number: 154248554

Start: 5122917

End: 5125490

Strand: Reverse

Name: atoS [C]

Synonym: Xaut_4635

Alternate gene names: 154248554

Gene position: 5125490-5122917 (Counterclockwise)

Preceding gene: 154248556

Following gene: 154248553

Centisome position: 96.54

GC content: 72.42

Gene sequence:

>2574_bases
ATGAGCGGTGAGCGAGCGACGGAAAGTGGCGCTGGCAGGCGGGCGGTGCGCAACCGCGCGGGCGCCAAGCCGTCCGGCCG
GGTTGCGCGCGGGGTGCTGGTCCTCGCTGCCGCCCTGGCCGGCGGCTTCGCGGCGGGCGTGGTGCTCGGCGAGGGCACGA
ATGCGCTGCTCTCGGCCCTCGTGGCCGCGCTCGCCGTGGTGGGCGCCTTCGAGCTGGTGCTCGCCGTGCGGCGCACGCTG
ACCGGTGGCGAACCGGAAGATCCGCTGGCGGACGCCGCGCTTGCCGCCTCCGGCGACGCCATGGCGGTGGTGGAGGATGG
CGAGCGGGTGGTGCAATCCAACGCCGCCTATCTGCGCATGTGCCGCAGCGGGGTGGATGCACCGCCCGTGCCCGAGCGTT
TCCTGGCGCGCATCCCCGGCAGCCAGCCCATGGTGGGCGAACTGCTGAACGCCGTTGCCGCCGCGACCATGGCCACGAGC
GCCGTCGCCTTCGCCACCGGCCCCGGCGGCCGCAGGCTGGAGGTGTCGGTGCATCCGCTCGGCTCGCCGCGACGGGTGCT
GTGGACGCTGCGCATGGCGGAGGACATGCAGGACATGGCCGCCGCGCCTGCTGCCGCTGTCGCGCCGGCGAGCGGGGCGG
CGGACGTGCCGCACACCCCCGAGGTGGTGCCGGGGGCGGACCTCGTCTCCGTATGGGAACGGGCGCCTGCGGGCTTGCTG
CATCTGTCCGGCGGACGCGTGCTGGCGCCCAACCTGACCCTGTGCCGCATGCTCGGCTATGCCCTCGCCGACTGGGGGCC
GGACGGCCGCGACGTGCGCGAGGTGGTGGCACCCGACGATCTCGGCGGTCTCGAACAGGTGCTGGCCGTGGGGGCGGAAG
CCGCCCTCAAGGTCGCGCTGACCCGCAAGGACGGCACGCACTTTCCCGCCATCCTGCGCCTCGCGCCGACCCAGCCCCCG
GCCGACGGCATGGTGGCGGCCGCCGTGCCGCTCGACGCGCTCGTCGACCTCCTGCCCGCGCGGGAGGGCGTAGCCCGGTC
CGTAGCGGCGCAAGCTCCTGCTGACGGGGCTCCTGCAACCAGTGCTCCTGCGGCTTCATCGGACCTGTTCTTCCTCAACG
CGCCGCTGGCTTTGGCGCTGGTGGACCCGGCCGGGCGCATCCGCGCCGCCAACGCCGCCTTCGCCCGCCTGTTCGGCCGC
GATGCCGCCGGCCGGCCCCTCGCGGCCCTGTTGGCCGACGCCGCCGGTGCCGAAGGCCTTCTGGCCGGCGCGGTGCACGC
GGGCGAGCCGCCCGCGCCCTGCGAGGTGACCCTCGCCGGCCCGGCCGGCCGCTCCGCCCGGCTCTACGCCGCCGCGCTCG
GTCCGGATGGGGGCGGCGACATCGCCTTGTGCGCCATCGATACCAGCGAGCAGAAGCAACTGGAGGCGCAGTTCGCCGAA
TCGCAGAAGCTGCAGGCGGTGGGCCACCTGGCGGGCGGGGTGGCGCACGACTTCAACAACATCCTCACGGCGATTCTCGG
CTATTGCGACCTGCTGCTGGTGAAGCATCGCCAGAGCGACCCGTCCTTCCCGGACATCATGCAGATCAAGCAGAATGCCA
ACCGCGCCGCCGGCCTGGTGGGGCAGTTGCTCGCCTTCTCCCGCCGTCAGACCCTGCTGCCTCAGGTGATCGAACTCACC
GACGTGATCTCGGATGCTGCCGCCCTTTTGCGCCGCCTCATCGGCGAGCGCATCACGCTGGAGGTGCAGCACGCCCGCGA
CCTGTGGCCGGTGAAGGTGGACAAGAACCAGTTCGAGCAGGTGATCATCAACCTCGTGGTGAACGCCCGCGACGCCATGC
CCGACGGCGGCACGCTGACGGTGCGCACCGCCAATGTCCCGGCGGCCGCCTCCACCGCCTACGGGCAGCGGCTGCCGGAA
GGCGATTATGTGCTGGTGGAGGTGGCCGACACCGGCACCGGCATTCCGCCCGAGGTCATGGGCAAGATCTTCGAGCCCTT
CTTCTCCACCAAGGAGGTGGGCAAGGGCACCGGGCTCGGCCTCTCCACCGTCTACGGCATCGTGGAGCAGACCGGCGGCA
CCATCCTCGCCGAGAGCACGCTCGGGGAGGGCACCACCTTCCGCGTGTTCCTGCCGCGCCACACGGGCGCGCTGGAGGAG
GAGCCGCCGCGCCCCGCCGAGCCGGAGCCCAAGGTCGCCGACCTCACCGGGCAAGGGCGGGTGCTGCTGGTGGAGGACGA
GGACGCGGTGCGCGCCTTCGCCAGCCGCGCGCTGGCCAATCGCGGCTACGAGGTTCTGGCGGCGGCGAGCGGCGTCGAGG
CGCTCGAGCTGTTCGAGACCGCCGGCAAGGTGGATATCGTGATTTCCGACGTGGTCATGCCGGAGATGGACGGGCCCACC
CTGCTGCGGGAATTGCGGGCGCGCGACCCCGCGCTCAAGGTCATCTTCATCTCGGGCTATGCCGAGGAGGCGTTCGCCCG
CAACCTGCCGCCCAGCGAGCGCTTTTCCTTCCTGCCCAAGCCGTTTTCCCTCAAGCAGCTGGTGGCGGCGGTGAGCGAGA
CGCTCCGCGCTTAA

Upstream 100 bases:

>100_bases
AACGCATTCTTTTATCTTGGGTTTAGGGGCAGATTTACCAATTGGGCCGATTCACCCTCGTGGGATCGGATTTTCGGTGT
GGCGGAGCAGGGCGACTGCA

Downstream 100 bases:

>100_bases
CCCGAGTAGACGGGGCCTTTGGAATTTCGCATTGTCTGCCTCGTGCGGGCCTTGGCGGCGGCCGATCGGGCCGCGCCCCG
GCTTCCGTACCAACCTGCCC

Product: multi-sensor hybrid histidine kinase

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 857; Mature: 856

Protein sequence:

>857_residues
MSGERATESGAGRRAVRNRAGAKPSGRVARGVLVLAAALAGGFAAGVVLGEGTNALLSALVAALAVVGAFELVLAVRRTL
TGGEPEDPLADAALAASGDAMAVVEDGERVVQSNAAYLRMCRSGVDAPPVPERFLARIPGSQPMVGELLNAVAAATMATS
AVAFATGPGGRRLEVSVHPLGSPRRVLWTLRMAEDMQDMAAAPAAAVAPASGAADVPHTPEVVPGADLVSVWERAPAGLL
HLSGGRVLAPNLTLCRMLGYALADWGPDGRDVREVVAPDDLGGLEQVLAVGAEAALKVALTRKDGTHFPAILRLAPTQPP
ADGMVAAAVPLDALVDLLPAREGVARSVAAQAPADGAPATSAPAASSDLFFLNAPLALALVDPAGRIRAANAAFARLFGR
DAAGRPLAALLADAAGAEGLLAGAVHAGEPPAPCEVTLAGPAGRSARLYAAALGPDGGGDIALCAIDTSEQKQLEAQFAE
SQKLQAVGHLAGGVAHDFNNILTAILGYCDLLLVKHRQSDPSFPDIMQIKQNANRAAGLVGQLLAFSRRQTLLPQVIELT
DVISDAAALLRRLIGERITLEVQHARDLWPVKVDKNQFEQVIINLVVNARDAMPDGGTLTVRTANVPAAASTAYGQRLPE
GDYVLVEVADTGTGIPPEVMGKIFEPFFSTKEVGKGTGLGLSTVYGIVEQTGGTILAESTLGEGTTFRVFLPRHTGALEE
EPPRPAEPEPKVADLTGQGRVLLVEDEDAVRAFASRALANRGYEVLAAASGVEALELFETAGKVDIVISDVVMPEMDGPT
LLRELRARDPALKVIFISGYAEEAFARNLPPSERFSFLPKPFSLKQLVAAVSETLRA

Sequences:

>Translated_857_residues
MSGERATESGAGRRAVRNRAGAKPSGRVARGVLVLAAALAGGFAAGVVLGEGTNALLSALVAALAVVGAFELVLAVRRTL
TGGEPEDPLADAALAASGDAMAVVEDGERVVQSNAAYLRMCRSGVDAPPVPERFLARIPGSQPMVGELLNAVAAATMATS
AVAFATGPGGRRLEVSVHPLGSPRRVLWTLRMAEDMQDMAAAPAAAVAPASGAADVPHTPEVVPGADLVSVWERAPAGLL
HLSGGRVLAPNLTLCRMLGYALADWGPDGRDVREVVAPDDLGGLEQVLAVGAEAALKVALTRKDGTHFPAILRLAPTQPP
ADGMVAAAVPLDALVDLLPAREGVARSVAAQAPADGAPATSAPAASSDLFFLNAPLALALVDPAGRIRAANAAFARLFGR
DAAGRPLAALLADAAGAEGLLAGAVHAGEPPAPCEVTLAGPAGRSARLYAAALGPDGGGDIALCAIDTSEQKQLEAQFAE
SQKLQAVGHLAGGVAHDFNNILTAILGYCDLLLVKHRQSDPSFPDIMQIKQNANRAAGLVGQLLAFSRRQTLLPQVIELT
DVISDAAALLRRLIGERITLEVQHARDLWPVKVDKNQFEQVIINLVVNARDAMPDGGTLTVRTANVPAAASTAYGQRLPE
GDYVLVEVADTGTGIPPEVMGKIFEPFFSTKEVGKGTGLGLSTVYGIVEQTGGTILAESTLGEGTTFRVFLPRHTGALEE
EPPRPAEPEPKVADLTGQGRVLLVEDEDAVRAFASRALANRGYEVLAAASGVEALELFETAGKVDIVISDVVMPEMDGPT
LLRELRARDPALKVIFISGYAEEAFARNLPPSERFSFLPKPFSLKQLVAAVSETLRA
>Mature_856_residues
SGERATESGAGRRAVRNRAGAKPSGRVARGVLVLAAALAGGFAAGVVLGEGTNALLSALVAALAVVGAFELVLAVRRTLT
GGEPEDPLADAALAASGDAMAVVEDGERVVQSNAAYLRMCRSGVDAPPVPERFLARIPGSQPMVGELLNAVAAATMATSA
VAFATGPGGRRLEVSVHPLGSPRRVLWTLRMAEDMQDMAAAPAAAVAPASGAADVPHTPEVVPGADLVSVWERAPAGLLH
LSGGRVLAPNLTLCRMLGYALADWGPDGRDVREVVAPDDLGGLEQVLAVGAEAALKVALTRKDGTHFPAILRLAPTQPPA
DGMVAAAVPLDALVDLLPAREGVARSVAAQAPADGAPATSAPAASSDLFFLNAPLALALVDPAGRIRAANAAFARLFGRD
AAGRPLAALLADAAGAEGLLAGAVHAGEPPAPCEVTLAGPAGRSARLYAAALGPDGGGDIALCAIDTSEQKQLEAQFAES
QKLQAVGHLAGGVAHDFNNILTAILGYCDLLLVKHRQSDPSFPDIMQIKQNANRAAGLVGQLLAFSRRQTLLPQVIELTD
VISDAAALLRRLIGERITLEVQHARDLWPVKVDKNQFEQVIINLVVNARDAMPDGGTLTVRTANVPAAASTAYGQRLPEG
DYVLVEVADTGTGIPPEVMGKIFEPFFSTKEVGKGTGLGLSTVYGIVEQTGGTILAESTLGEGTTFRVFLPRHTGALEEE
PPRPAEPEPKVADLTGQGRVLLVEDEDAVRAFASRALANRGYEVLAAASGVEALELFETAGKVDIVISDVVMPEMDGPTL
LRELRARDPALKVIFISGYAEEAFARNLPPSERFSFLPKPFSLKQLVAAVSETLRA

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=372, Percent_Identity=25.8064516129032, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1790436, Length=247, Percent_Identity=32.7935222672065, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1790300, Length=351, Percent_Identity=31.3390313390313, Blast_Score=100, Evalue=7e-22,
Organism=Escherichia coli, GI87081816, Length=252, Percent_Identity=28.968253968254, Blast_Score=90, Evalue=7e-19,
Organism=Escherichia coli, GI48994928, Length=229, Percent_Identity=32.3144104803493, Blast_Score=85, Evalue=2e-17,
Organism=Escherichia coli, GI1788713, Length=375, Percent_Identity=23.4666666666667, Blast_Score=84, Evalue=4e-17,
Organism=Escherichia coli, GI1788550, Length=122, Percent_Identity=37.7049180327869, Blast_Score=78, Evalue=3e-15,
Organism=Escherichia coli, GI1786600, Length=271, Percent_Identity=25.830258302583, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1786912, Length=248, Percent_Identity=29.0322580645161, Blast_Score=71, Evalue=3e-13,
Organism=Escherichia coli, GI1790299, Length=119, Percent_Identity=34.453781512605, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI145693157, Length=278, Percent_Identity=24.4604316546763, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 88682; Mature: 88551

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGERATESGAGRRAVRNRAGAKPSGRVARGVLVLAAALAGGFAAGVVLGEGTNALLSAL
CCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHEEEEEECCHHHHHHHH
VAALAVVGAFELVLAVRRTLTGGEPEDPLADAALAASGDAMAVVEDGERVVQSNAAYLRM
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEEECCHHHHHCCHHHHHH
CRSGVDAPPVPERFLARIPGSQPMVGELLNAVAAATMATSAVAFATGPGGRRLEVSVHPL
HHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCC
GSPRRVLWTLRMAEDMQDMAAAPAAAVAPASGAADVPHTPEVVPGADLVSVWERAPAGLL
CCCHHHEEHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEE
HLSGGRVLAPNLTLCRMLGYALADWGPDGRDVREVVAPDDLGGLEQVLAVGAEAALKVAL
EECCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHCCHHHEEEEE
TRKDGTHFPAILRLAPTQPPADGMVAAAVPLDALVDLLPAREGVARSVAAQAPADGAPAT
ECCCCCCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCC
SAPAASSDLFFLNAPLALALVDPAGRIRAANAAFARLFGRDAAGRPLAALLADAAGAEGL
CCCCCCCCEEEEECCEEEEEECCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
LAGAVHAGEPPAPCEVTLAGPAGRSARLYAAALGPDGGGDIALCAIDTSEQKQLEAQFAE
EECCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHH
SQKLQAVGHLAGGVAHDFNNILTAILGYCDLLLVKHRQSDPSFPDIMQIKQNANRAAGLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHH
GQLLAFSRRQTLLPQVIELTDVISDAAALLRRLIGERITLEVQHARDLWPVKVDKNQFEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECHHHHHH
VIINLVVNARDAMPDGGTLTVRTANVPAAASTAYGQRLPEGDYVLVEVADTGTGIPPEVM
HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHH
GKIFEPFFSTKEVGKGTGLGLSTVYGIVEQTGGTILAESTLGEGTTFRVFLPRHTGALEE
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCCCCC
EPPRPAEPEPKVADLTGQGRVLLVEDEDAVRAFASRALANRGYEVLAAASGVEALELFET
CCCCCCCCCCCEECCCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHH
AGKVDIVISDVVMPEMDGPTLLRELRARDPALKVIFISGYAEEAFARNLPPSERFSFLPK
CCCEEEEEECEECCCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHCCCCCHHHHCCCCC
PFSLKQLVAAVSETLRA
CCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SGERATESGAGRRAVRNRAGAKPSGRVARGVLVLAAALAGGFAAGVVLGEGTNALLSAL
CCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHEEEEEECCHHHHHHHH
VAALAVVGAFELVLAVRRTLTGGEPEDPLADAALAASGDAMAVVEDGERVVQSNAAYLRM
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEEECCHHHHHCCHHHHHH
CRSGVDAPPVPERFLARIPGSQPMVGELLNAVAAATMATSAVAFATGPGGRRLEVSVHPL
HHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCC
GSPRRVLWTLRMAEDMQDMAAAPAAAVAPASGAADVPHTPEVVPGADLVSVWERAPAGLL
CCCHHHEEHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEE
HLSGGRVLAPNLTLCRMLGYALADWGPDGRDVREVVAPDDLGGLEQVLAVGAEAALKVAL
EECCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHCCHHHEEEEE
TRKDGTHFPAILRLAPTQPPADGMVAAAVPLDALVDLLPAREGVARSVAAQAPADGAPAT
ECCCCCCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCC
SAPAASSDLFFLNAPLALALVDPAGRIRAANAAFARLFGRDAAGRPLAALLADAAGAEGL
CCCCCCCCEEEEECCEEEEEECCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
LAGAVHAGEPPAPCEVTLAGPAGRSARLYAAALGPDGGGDIALCAIDTSEQKQLEAQFAE
EECCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHH
SQKLQAVGHLAGGVAHDFNNILTAILGYCDLLLVKHRQSDPSFPDIMQIKQNANRAAGLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHH
GQLLAFSRRQTLLPQVIELTDVISDAAALLRRLIGERITLEVQHARDLWPVKVDKNQFEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECHHHHHH
VIINLVVNARDAMPDGGTLTVRTANVPAAASTAYGQRLPEGDYVLVEVADTGTGIPPEVM
HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHH
GKIFEPFFSTKEVGKGTGLGLSTVYGIVEQTGGTILAESTLGEGTTFRVFLPRHTGALEE
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCCCCC
EPPRPAEPEPKVADLTGQGRVLLVEDEDAVRAFASRALANRGYEVLAAASGVEALELFET
CCCCCCCCCCCEECCCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHH
AGKVDIVISDVVMPEMDGPTLLRELRARDPALKVIFISGYAEEAFARNLPPSERFSFLPK
CCCEEEEEECEECCCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHCCCCCHHHHCCCCC
PFSLKQLVAAVSETLRA
CCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA