Click here to switch to the map view.

The map label for this gene is nuoJ [H]

Identifier: 154248543

GI number: 154248543

Start: 5110903

End: 5111517

Strand: Reverse

Name: nuoJ [H]

Synonym: Xaut_4624

Alternate gene names: 154248543

Gene position: 5111517-5110903 (Counterclockwise)

Preceding gene: 154248544

Following gene: 154248542

Centisome position: 96.28

GC content: 64.72

Gene sequence:

>615_bases
ATGAACGTCGCGGCAGCGTTTTTCTATCTCTTCGCCTTCGTGCTGGTGGCGTCCGCCTTCATGGTGATCTCCTCCCGCAA
CCCGGTGCAGTCCGTCCTGTTCCTCATCCTCGCCTTCGTGAACGCGGCGGGGCTCTTCATCCTGATCGGTGCGGAGTTCC
TCGCGCTGATCCTGGTGGTGGTCTATGTGGGCGCGGTGGCGGTGCTCTTCCTCTTCGTCGTGATGATGCTCGACGTGGAC
TTCGTGGAACTGCGCCAGGGCTTCCTGCAATACCTGCCGGTGGGCCTCGTGATCGGGCTCATCTTCCTCGCCGAGCTGGT
GCTTGTCGCCGGGGCTTGGGTGATGGGGCCGGGCGTCGCTTCGGCGGTGAAGTCGGCGCCGCCGTCCGCAGGTGACGTGG
GCAACGTCCAGGCCATCGGGCAGGTGCTCTACACGGACTACATCTACTTCTTCCAGGCGGCGGGCTTCGTGCTTCTCGTC
GCCATGATCGGCGCCATCGTGCTCACCCTGCGCCACAAGGTGAACGTGAAGCGCCAGAATATCTCGGCGCAGGTCGCGCG
CACCGCCAAGACCGCCATGGACGTGGTCAAGGTGCGCCCCGGCCAGGGCCTTTGA

Upstream 100 bases:

>100_bases
AGTGGACTTTTGGGATGCGTCAAGGCAATCGACAGGCCGGCCGCCATAAGGGGCCGGACATGACCGGCGCGGGCGCGCCG
CGGGGAGGGGGGCTTCGCGC

Downstream 100 bases:

>100_bases
GGGGGATGGGCATGGACATCGGTCTCTCCCACTATCTGACCGTCGCGGCGATCCTGTTCACGCTGGGAACGCTCGGCATC
TTCCTCAACCGGAAGAATGT

Product: NADH-ubiquinone/plastoquinone oxidoreductase chain 6

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J [H]

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MNVAAAFFYLFAFVLVASAFMVISSRNPVQSVLFLILAFVNAAGLFILIGAEFLALILVVVYVGAVAVLFLFVVMMLDVD
FVELRQGFLQYLPVGLVIGLIFLAELVLVAGAWVMGPGVASAVKSAPPSAGDVGNVQAIGQVLYTDYIYFFQAAGFVLLV
AMIGAIVLTLRHKVNVKRQNISAQVARTAKTAMDVVKVRPGQGL

Sequences:

>Translated_204_residues
MNVAAAFFYLFAFVLVASAFMVISSRNPVQSVLFLILAFVNAAGLFILIGAEFLALILVVVYVGAVAVLFLFVVMMLDVD
FVELRQGFLQYLPVGLVIGLIFLAELVLVAGAWVMGPGVASAVKSAPPSAGDVGNVQAIGQVLYTDYIYFFQAAGFVLLV
AMIGAIVLTLRHKVNVKRQNISAQVARTAKTAMDVVKVRPGQGL
>Mature_204_residues
MNVAAAFFYLFAFVLVASAFMVISSRNPVQSVLFLILAFVNAAGLFILIGAEFLALILVVVYVGAVAVLFLFVVMMLDVD
FVELRQGFLQYLPVGLVIGLIFLAELVLVAGAWVMGPGVASAVKSAPPSAGDVGNVQAIGQVLYTDYIYFFQAAGFVLLV
AMIGAIVLTLRHKVNVKRQNISAQVARTAKTAMDVVKVRPGQGL

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

Organism=Escherichia coli, GI1788616, Length=183, Percent_Identity=28.9617486338798, Blast_Score=67, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 21760; Mature: 21760

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVAAAFFYLFAFVLVASAFMVISSRNPVQSVLFLILAFVNAAGLFILIGAEFLALILVV
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYVGAVAVLFLFVVMMLDVDFVELRQGFLQYLPVGLVIGLIFLAELVLVAGAWVMGPGVA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
SAVKSAPPSAGDVGNVQAIGQVLYTDYIYFFQAAGFVLLVAMIGAIVLTLRHKVNVKRQN
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISAQVARTAKTAMDVVKVRPGQGL
HHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNVAAAFFYLFAFVLVASAFMVISSRNPVQSVLFLILAFVNAAGLFILIGAEFLALILVV
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYVGAVAVLFLFVVMMLDVDFVELRQGFLQYLPVGLVIGLIFLAELVLVAGAWVMGPGVA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
SAVKSAPPSAGDVGNVQAIGQVLYTDYIYFFQAAGFVLLVAMIGAIVLTLRHKVNVKRQN
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISAQVARTAKTAMDVVKVRPGQGL
HHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8566820 [H]