| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154248485
Identifier: 154248485
GI number: 154248485
Start: 5045546
End: 5046691
Strand: Direct
Name: 154248485
Synonym: Xaut_4565
Alternate gene names: NA
Gene position: 5045546-5046691 (Clockwise)
Preceding gene: 154248480
Following gene: 154248486
Centisome position: 95.04
GC content: 73.47
Gene sequence:
>1146_bases ATGACCCAAGCGACTCGTCCGCCGGAGTCCTTCCAGCAGACTGCGCGCTGGCCCGACCGCCGCATCCTCGACCTGTTCGG CATCGCGCACCCGATCCTGCTGGGACCCATGGCGGGCGCGGGCACACCGAAGCTTGCCATCGCGGTGGGTGAGGGGGGCG GCCTCGCTTCCCTGCCCGGTGCCATGTACCAGCCGAATGAACTGCGCGCGGCCATCGAAGAGGTGCGCGCCGGGCTTCCC GGCCGGCCGCTCAACGTCAATTTCTTCTGCCACACTCCGCCCACGCCCGATCCGGTGCGCATGATGGGCTGGCGGACGCG GCTCGCGCCTTATTATGTGGAGCACGGCCTCGACCCGCAGGCGACGCCGCCGGCCGGCGGGCGCGCGCCGTTCGACGCCA CCTTGTGCGCCTTGGTGGAGGAGACGCGGCCGGAGGTGGTGAGCTTCCATTTCGGCCTGCCCGATCCGGCGCTGCTGGCG CGGGTGAAGGCGACGGGGGCCAAGGTGATCTCGTCAGCCTCCACCGTGGCCGAAGCCAGATGGCTGGAAGCGCGCGGCTG CGACGCCATCATCGCCATGGGGCTGGAAGCGGGCGGCCATCGCGCCACCTTCCTCGGTAACGATGTGGCGGGCGACATGG CCGGCGACATGAGCCGGCAGGTGGGCACCTTCGCCCTGGTGCCGCAGGTGGCGGATGCGGTGGGCGTGCCGGTGATCGCC GCCGGCGGCATCGCCGACGCGCGGGGCATCGTCGCGGCGCTGGCGTTGGGCGCTTCCGCGGTGCAGGTGGGCACCGCCTT CCTGCTGTGCCCGGAAGCGAGGATCCCGGCCGTGCATCGCGCCGCGCTGGAGGCGGCGGGGGACGACAGCACCGCCCTCA CCAACCTGTTCACCGGCCGCCCGGCGCGCGGCATCATGAACCGGGTGATGCGGGAGGTGGGCCCCCTCTCCGCCGACGCT CCCGCCTTCCCGCTGGCCGGCGGCGCCCTCGCCCCGCTGCGGGCGGCGGCCGAAGCCGAGGGCCGGGATGACTTCACCAA CCTGTGGGCCGGGCAGGCCGCGCGCCTCGCCCCCCGCCTGCCCGCCGCCGACCTGACCCGCAAGCTCGCCATCGACGCCC TCGCCCAGCTAAATCCCTCGGCCTGA
Upstream 100 bases:
>100_bases CGGATATCCATCATCAGAAGTGAACAGTAATATCAGAATGTTTCAATTTCAATGAAACTCGCATGGGCCATAATGGGCGA AAGAGCGAAGGAGGCCCGCC
Downstream 100 bases:
>100_bases ACTGAAGCAGGCACGGTCCTTCGCTCGGCTCTCCTGTGCCCGGTGCGTGATCTTGGCGCTTGGCGCGGCCCGTTCCGCGT GGTCATCTCCCGCGACCATC
Product: 2-nitropropane dioxygenase NPD
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MTQATRPPESFQQTARWPDRRILDLFGIAHPILLGPMAGAGTPKLAIAVGEGGGLASLPGAMYQPNELRAAIEEVRAGLP GRPLNVNFFCHTPPTPDPVRMMGWRTRLAPYYVEHGLDPQATPPAGGRAPFDATLCALVEETRPEVVSFHFGLPDPALLA RVKATGAKVISSASTVAEARWLEARGCDAIIAMGLEAGGHRATFLGNDVAGDMAGDMSRQVGTFALVPQVADAVGVPVIA AGGIADARGIVAALALGASAVQVGTAFLLCPEARIPAVHRAALEAAGDDSTALTNLFTGRPARGIMNRVMREVGPLSADA PAFPLAGGALAPLRAAAEAEGRDDFTNLWAGQAARLAPRLPAADLTRKLAIDALAQLNPSA
Sequences:
>Translated_381_residues MTQATRPPESFQQTARWPDRRILDLFGIAHPILLGPMAGAGTPKLAIAVGEGGGLASLPGAMYQPNELRAAIEEVRAGLP GRPLNVNFFCHTPPTPDPVRMMGWRTRLAPYYVEHGLDPQATPPAGGRAPFDATLCALVEETRPEVVSFHFGLPDPALLA RVKATGAKVISSASTVAEARWLEARGCDAIIAMGLEAGGHRATFLGNDVAGDMAGDMSRQVGTFALVPQVADAVGVPVIA AGGIADARGIVAALALGASAVQVGTAFLLCPEARIPAVHRAALEAAGDDSTALTNLFTGRPARGIMNRVMREVGPLSADA PAFPLAGGALAPLRAAAEAEGRDDFTNLWAGQAARLAPRLPAADLTRKLAIDALAQLNPSA >Mature_380_residues TQATRPPESFQQTARWPDRRILDLFGIAHPILLGPMAGAGTPKLAIAVGEGGGLASLPGAMYQPNELRAAIEEVRAGLPG RPLNVNFFCHTPPTPDPVRMMGWRTRLAPYYVEHGLDPQATPPAGGRAPFDATLCALVEETRPEVVSFHFGLPDPALLAR VKATGAKVISSASTVAEARWLEARGCDAIIAMGLEAGGHRATFLGNDVAGDMAGDMSRQVGTFALVPQVADAVGVPVIAA GGIADARGIVAALALGASAVQVGTAFLLCPEARIPAVHRAALEAAGDDSTALTNLFTGRPARGIMNRVMREVGPLSADAP AFPLAGGALAPLRAAAEAEGRDDFTNLWAGQAARLAPRLPAADLTRKLAIDALAQLNPSA
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=318, Percent_Identity=30.188679245283, Blast_Score=128, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 39404; Mature: 39272
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQATRPPESFQQTARWPDRRILDLFGIAHPILLGPMAGAGTPKLAIAVGEGGGLASLPG CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCC AMYQPNELRAAIEEVRAGLPGRPLNVNFFCHTPPTPDPVRMMGWRTRLAPYYVEHGLDPQ CCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCHHHHHCCCCCC ATPPAGGRAPFDATLCALVEETRPEVVSFHFGLPDPALLARVKATGAKVISSASTVAEAR CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH WLEARGCDAIIAMGLEAGGHRATFLGNDVAGDMAGDMSRQVGTFALVPQVADAVGVPVIA HHHHCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCEEE AGGIADARGIVAALALGASAVQVGTAFLLCPEARIPAVHRAALEAAGDDSTALTNLFTGR ECCCHHHHHHHHHHHHCHHHHHHCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHCCC PARGIMNRVMREVGPLSADAPAFPLAGGALAPLRAAAEAEGRDDFTNLWAGQAARLAPRL CHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCHHHHCCCC PAADLTRKLAIDALAQLNPSA CHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TQATRPPESFQQTARWPDRRILDLFGIAHPILLGPMAGAGTPKLAIAVGEGGGLASLPG CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCC AMYQPNELRAAIEEVRAGLPGRPLNVNFFCHTPPTPDPVRMMGWRTRLAPYYVEHGLDPQ CCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCHHHHHCCCCCC ATPPAGGRAPFDATLCALVEETRPEVVSFHFGLPDPALLARVKATGAKVISSASTVAEAR CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH WLEARGCDAIIAMGLEAGGHRATFLGNDVAGDMAGDMSRQVGTFALVPQVADAVGVPVIA HHHHCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCEEE AGGIADARGIVAALALGASAVQVGTAFLLCPEARIPAVHRAALEAAGDDSTALTNLFTGR ECCCHHHHHHHHHHHHCHHHHHHCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHCCC PARGIMNRVMREVGPLSADAPAFPLAGGALAPLRAAAEAEGRDDFTNLWAGQAARLAPRL CHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCHHHHCCCC PAADLTRKLAIDALAQLNPSA CHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA