| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is bztC [H]
Identifier: 154248468
GI number: 154248468
Start: 5026204
End: 5027625
Strand: Direct
Name: bztC [H]
Synonym: Xaut_4548
Alternate gene names: 154248468
Gene position: 5026204-5027625 (Clockwise)
Preceding gene: 154248467
Following gene: 154248469
Centisome position: 94.67
GC content: 67.23
Gene sequence:
>1422_bases ATGAGCGACACCACCGTGCCCCTCTCCGCCCCCCGGGTCTCCCCCGCGCAGGCCTATGTGTCGACAACCCTGCGCGAGCA GGAGCCGGCCCCCGTCGCCACCCGCGGCCCCGTGCTGTGGGTGCGCAAGCACCTGGTCGGCTCGGTGCCGCAGGTGCTCC TGACCCTGTTCGGCATCTGGCTGGTCTATGTGACCGTCCCGCCGATGATCAAATTCTTCCTGATCGACGCGGTGTGGACC GGCGCCAACCGCGAGGCCTGCCTGCCCGAGAAGGTGGGCCGCGCCGTCGGCGCCTGCTGGCCCTTCGTGTGGGCGAAGCT CGACCAGCTCATCTACGGCTTCTATCCCGCCAGCGAGCGCTGGCGCGTGAACGTGGTCTATGCGCTGGGCGTGATCCTGC TGCTGCCGCTGCTGATCCAGAAGCTGCCGGGCAAGCGCCTCAACGCGATCCTGTTCTTCGGCATCTACCCGGTGGTGGCC TTCGTGCTGCTCACCGGCGGCAATCTGGAGATGCAGCGCTTCCTGATCGGCTATTTCGGCCCCACCGACCTGTTCGCCGG TGCCGGCATCGTGCAGGGGATGCGCATCAGCTTCTGGATCGACTTCCTGCTGTCGACCGCCATCGTCACCGGCATCGCCT ATCTGGTGTCGCGCATCGTCGCCGGGCCGGAGGCGGCGCCGGGAGCGGCGAAGACCACGCTTTCGGTCTTCGTCCTGCTC GGCCTCGTCATCTTCGCCATGGACATCGACGTGGGCCTGCCGCAGGTGGAAACCCGGCTGTGGGGCGGCCTGCTGGTCAC CCTCGTCATCGCGGTCACCGGCATCACGGTGTCGCTGCCATTCGGCATCCTGCTGGCACTCGGCCGGCGCTCGAAGCTGC CGCTGGTGAAGGCGCTGTCCATCATCTTCATCGAGTTCTGGCGCGGCGTGCCGCTCATCACGGTGCTGTTCTTCGCCACC TACATGCTGCCCCTGTTCCTGCCCGGGCGCCTGACCATCGACGGGTTGCTGCGGGCCCTGGTGGGCGTCGCCCTGTTCGC CTCGGCCTATATGGCGGAGGTGGTGCGCGGCGGCCTGCAGGCCATCCCCAAGGGCCAGTATGAAGGCGCCATGGCGGTGG GCCTGCCGTCCTCGCTCATGCTGCGGCTCGTGGTGCTGCCGCAGGCGCTGAAGCTGGTGATCCCCGGCATCGTCAACAAC TTCATCGGCCTGTTCAAGGACACGACGCTGGTGCTGATCGTCTCGATCTTCGACCTGCTCGGCTCCATGCGCGCGGCCTT CACCGACCCCAACTGGGCCTCGCCCACCACCCTGTTCACCGGTTTCGGCTTCGCCGGCATCATCTACTTCGTCTTCTGCT TCGGCATGTCCCGGTATTCGATGGCGCTGGAAAAGCGCCTCGACCGGGCTCAGCGGCACTGA
Upstream 100 bases:
>100_bases ATCATCGCGGTGACCATGGCGGTCTACCTCACCATCTCGATCCTCACGTCGGCGATCATGGGCTGGTACAACAAGCGCGT CGCGCTGGTGGAGCGGTGAG
Downstream 100 bases:
>100_bases TTGAAAGGGCGACCCATGAGCGCAGATCCCATCATCGCGGCCAGCGAGGCCGCCGCCCCGAAGATCGCCGTCGAGATGAC CGGCGTGAACAAGTGGTACG
Product: polar amino acid ABC transporter inner membrane subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MSDTTVPLSAPRVSPAQAYVSTTLREQEPAPVATRGPVLWVRKHLVGSVPQVLLTLFGIWLVYVTVPPMIKFFLIDAVWT GANREACLPEKVGRAVGACWPFVWAKLDQLIYGFYPASERWRVNVVYALGVILLLPLLIQKLPGKRLNAILFFGIYPVVA FVLLTGGNLEMQRFLIGYFGPTDLFAGAGIVQGMRISFWIDFLLSTAIVTGIAYLVSRIVAGPEAAPGAAKTTLSVFVLL GLVIFAMDIDVGLPQVETRLWGGLLVTLVIAVTGITVSLPFGILLALGRRSKLPLVKALSIIFIEFWRGVPLITVLFFAT YMLPLFLPGRLTIDGLLRALVGVALFASAYMAEVVRGGLQAIPKGQYEGAMAVGLPSSLMLRLVVLPQALKLVIPGIVNN FIGLFKDTTLVLIVSIFDLLGSMRAAFTDPNWASPTTLFTGFGFAGIIYFVFCFGMSRYSMALEKRLDRAQRH
Sequences:
>Translated_473_residues MSDTTVPLSAPRVSPAQAYVSTTLREQEPAPVATRGPVLWVRKHLVGSVPQVLLTLFGIWLVYVTVPPMIKFFLIDAVWT GANREACLPEKVGRAVGACWPFVWAKLDQLIYGFYPASERWRVNVVYALGVILLLPLLIQKLPGKRLNAILFFGIYPVVA FVLLTGGNLEMQRFLIGYFGPTDLFAGAGIVQGMRISFWIDFLLSTAIVTGIAYLVSRIVAGPEAAPGAAKTTLSVFVLL GLVIFAMDIDVGLPQVETRLWGGLLVTLVIAVTGITVSLPFGILLALGRRSKLPLVKALSIIFIEFWRGVPLITVLFFAT YMLPLFLPGRLTIDGLLRALVGVALFASAYMAEVVRGGLQAIPKGQYEGAMAVGLPSSLMLRLVVLPQALKLVIPGIVNN FIGLFKDTTLVLIVSIFDLLGSMRAAFTDPNWASPTTLFTGFGFAGIIYFVFCFGMSRYSMALEKRLDRAQRH >Mature_472_residues SDTTVPLSAPRVSPAQAYVSTTLREQEPAPVATRGPVLWVRKHLVGSVPQVLLTLFGIWLVYVTVPPMIKFFLIDAVWTG ANREACLPEKVGRAVGACWPFVWAKLDQLIYGFYPASERWRVNVVYALGVILLLPLLIQKLPGKRLNAILFFGIYPVVAF VLLTGGNLEMQRFLIGYFGPTDLFAGAGIVQGMRISFWIDFLLSTAIVTGIAYLVSRIVAGPEAAPGAAKTTLSVFVLLG LVIFAMDIDVGLPQVETRLWGGLLVTLVIAVTGITVSLPFGILLALGRRSKLPLVKALSIIFIEFWRGVPLITVLFFATY MLPLFLPGRLTIDGLLRALVGVALFASAYMAEVVRGGLQAIPKGQYEGAMAVGLPSSLMLRLVVLPQALKLVIPGIVNNF IGLFKDTTLVLIVSIFDLLGSMRAAFTDPNWASPTTLFTGFGFAGIIYFVFCFGMSRYSMALEKRLDRAQRH
Specific function: Part of a binding-protein-dependent transport system for glutamate, glutamine, aspartate and asparagine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082239, Length=220, Percent_Identity=60.9090909090909, Blast_Score=260, Evalue=1e-70, Organism=Escherichia coli, GI1788226, Length=209, Percent_Identity=32.5358851674641, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI1786873, Length=212, Percent_Identity=31.6037735849057, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1787030, Length=157, Percent_Identity=32.484076433121, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1786874, Length=171, Percent_Identity=26.3157894736842, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1788645, Length=211, Percent_Identity=27.0142180094787, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1787087, Length=229, Percent_Identity=28.82096069869, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1788646, Length=225, Percent_Identity=28, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI48994930, Length=96, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 51585; Mature: 51453
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTTVPLSAPRVSPAQAYVSTTLREQEPAPVATRGPVLWVRKHLVGSVPQVLLTLFGIW CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH LVYVTVPPMIKFFLIDAVWTGANREACLPEKVGRAVGACWPFVWAKLDQLIYGFYPASER HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC WRVNVVYALGVILLLPLLIQKLPGKRLNAILFFGIYPVVAFVLLTGGNLEMQRFLIGYFG EEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC PTDLFAGAGIVQGMRISFWIDFLLSTAIVTGIAYLVSRIVAGPEAAPGAAKTTLSVFVLL HHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH GLVIFAMDIDVGLPQVETRLWGGLLVTLVIAVTGITVSLPFGILLALGRRSKLPLVKALS HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH IIFIEFWRGVPLITVLFFATYMLPLFLPGRLTIDGLLRALVGVALFASAYMAEVVRGGLQ HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIPKGQYEGAMAVGLPSSLMLRLVVLPQALKLVIPGIVNNFIGLFKDTTLVLIVSIFDLL HCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSMRAAFTDPNWASPTTLFTGFGFAGIIYFVFCFGMSRYSMALEKRLDRAQRH HHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDTTVPLSAPRVSPAQAYVSTTLREQEPAPVATRGPVLWVRKHLVGSVPQVLLTLFGIW CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH LVYVTVPPMIKFFLIDAVWTGANREACLPEKVGRAVGACWPFVWAKLDQLIYGFYPASER HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC WRVNVVYALGVILLLPLLIQKLPGKRLNAILFFGIYPVVAFVLLTGGNLEMQRFLIGYFG EEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC PTDLFAGAGIVQGMRISFWIDFLLSTAIVTGIAYLVSRIVAGPEAAPGAAKTTLSVFVLL HHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH GLVIFAMDIDVGLPQVETRLWGGLLVTLVIAVTGITVSLPFGILLALGRRSKLPLVKALS HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH IIFIEFWRGVPLITVLFFATYMLPLFLPGRLTIDGLLRALVGVALFASAYMAEVVRGGLQ HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIPKGQYEGAMAVGLPSSLMLRLVVLPQALKLVIPGIVNNFIGLFKDTTLVLIVSIFDLL HCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSMRAAFTDPNWASPTTLFTGFGFAGIIYFVFCFGMSRYSMALEKRLDRAQRH HHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8809753 [H]