Click here to switch to the map view.

The map label for this gene is 154248407

Identifier: 154248407

GI number: 154248407

Start: 4979898

End: 4981898

Strand: Reverse

Name: 154248407

Synonym: Xaut_4487

Alternate gene names: NA

Gene position: 4981898-4979898 (Counterclockwise)

Preceding gene: 154248408

Following gene: 154248406

Centisome position: 93.84

GC content: 65.17

Gene sequence:

>2001_bases
GTGTCCGGCAAAACCCTCGACGTCTCGATCCTCGTGCGCCTGGTGGACCGTGTCACCGGCCCGCTCTCAGTGCTCCAGCG
CAAGTTCGCCGGTCTCGCCCAGCTGAGCCAGCGCATCGGCATCCTCGGCGCCGCCGTCGCCGGTATCTCGTTTGCCGTGC
CGCTGGCGTCGGCTGCAGCCTATGACCAACAGCTGCGCGACATGGCGGTGACCGCCGGCGAGTTCGGCCAGGGCGCGGAG
CGTATGATCCGCAAGGTCGGTCGCGATATGGAGCAGTTGGCGCTCAAGACAGGCATCGCCTCCAAGGCGCTTGCAGATGC
ACGGGGTGTCCTGGTGTCCGGCGGCTTCGACAATGGCCTCGTCACCGATCTCATGCCCACCATCGGCAGGGTGTCCAAGG
CGGCGAGCGCCGACCCCATCGATACCGCCAAGACTGCCGGTGCTCTCGCTGGCCCCCTCAAGATCGCCGCAGCTGACATG
GAGCAATCGCTGGCGATGCTCGTGGTCGCCGGCAAGCTGGGGGCGTTCGAGTTCAAAAATATGGCGAAGGAGCTGCCGGG
GCTGGCGGCTCAGATGAACAATCTCGGCGTGACCGGCAAGGAGGCTGTAGCCTCCCTTGGTGCAGGGCTTCAGATTGCGA
TGAAGGCGACGGATTCGCCGGCAACGGCCGCGAACAACATGAAGAATTTTCTCGCCAAGCTGAACGCGCCTGAGACCGTG
AAAAACTTTGAGGAGGCCGGCGTCAACCTTCCCGCCGTTAAGGCAGACGCCGTGGCCAAGGGGATCAACCCGGTCGAAGC
GGTCATTCAGAAGCTGATGGACCTGACCAAGGTGCCGCAGAAGGAGATCGATGCGATCTACAAGCGGTCGAAGGATGCCG
GGAAAACCGATGTCGAGGCGGCAGAGGATGTGAAGTCGCGGATCGAGCAGGCGCTGGCAGGATCGAAGGTCGGCAAGCTC
TTCGGCGACATGCAGGCGCTGGATTTCATTACACCGATGCGCATCTACACCCAGCTCTACAAACAATATACGGAGGCCAT
CAAGGCGGCCGACGTTGGTGTGATCGGTCGAGATTCGGAAACCCAGCTCGCCGGCCTCGACAGCGCCCTGAAGGAAACAG
CCGAAATCTCTGAACAGGCCGGCCGCCGGATCGGGGACGGCTTCGCTCCCGTCCTGTTGCAGGTCAACAAGGGCCTCAAG
GCCGCACTGGGATGGATGCGGGAGGTGGATGAGGCGTATCCCAGCCTGATCGATTACACCCTCCTGGGTGTCGGCGCGTT
CCTCGCCCTGGTGGTCGCGCTCGCCGCGCTGGGGCCAGCGTTCGCCATCATCTCCGCTGGCTTTGGGGTTCTTCTGCTGC
TCTGGTCGCCCATTGGCGCCGCCATCATGGGCATCGCGGCGCTCGCGGTGCTGGTTTGGGCCAACTGGTCGACGGTGGGG
CCGATGTTCGCCCGCATGTGGGAGGGCATCAAGACGGTGTTCTCCGGCTTCGTCGAGTGGGTCGCCGGCATCTTCACCCT
CGATTCCAAGCGAGCGGCCGATGGCGTGCGCACTATGTTTGAGGGTCTCGCCACCATCGCCGGTGGCCTGTGGGACCTCG
TCAAGGTGTCCTGGACGGGCTTCGTGGCGTGGATCGATGGCTGGACGGCCGGTGCCTTCACCGGCGCGATCAACGGCATC
AAGGCCGCGTGGCAAGGCCTGATCGACTGGTTCAAGTCGCACGTGCCCAGCTTCGACATCCAGATGCCAGATTGGGTCAA
GCGCCTCTATGGCGGGCAGATGGCAACCCTGCCGGCGGTCGACGCACCCGTCAATCCAATGGGCGACGGCACCGGCTGGT
CGGCGCCGGGCTTCGCGGCGCCGACTGCGGCGGCCGGCACCACCAAGGTCGGCGGCGAGATCATCGTGCGCGCCGAGCCC
GGCACCGAGGCGCGGGTGCAGTCGGACAACCCCGCGGTGCCCATGGTGCAGGATCGCGGCCTCGTCCTCGGTCGGCCGTG
A

Upstream 100 bases:

>100_bases
TCTCCATGCGCGATGTCGAGGGCCTCGACGATGTCGGCGCCAAGTGGTGGTGGAACGCCTGCATGGCGTTCCAGAAGGCT
GCATCTGAGGGGAGCAAGTA

Downstream 100 bases:

>100_bases
GGGTTTTATGGATCCTGAATTCGATCCCATCGCCAAGTGCTCGCCTCGGTACGTGTTTCTGCTTGAGCGCGAACTTGATC
GGCGGCGGACAAGGCGCAGA

Product: TP901 family phage tail tape measure protein

Products: NA

Alternate protein names: Bacteriophage Protein; Phage Tail Tape Measure Protein; Pyocin R2_PP Tail Length Determination Protein; Bacteriophage Tail Protein; Prophage; Tail Tape Meausure Protein; Phage Tail Tape Measure Protein Core Region; Phage Minor Tail Protein; Tail Tape Measure Protein; Phage Tail Tape-Measure Protein; Phage Tail Length Determination Protein; Phage Tail Protein; Bacteriophage Protein; Tail Tape Measure Core Region

Number of amino acids: Translated: 666; Mature: 665

Protein sequence:

>666_residues
MSGKTLDVSILVRLVDRVTGPLSVLQRKFAGLAQLSQRIGILGAAVAGISFAVPLASAAAYDQQLRDMAVTAGEFGQGAE
RMIRKVGRDMEQLALKTGIASKALADARGVLVSGGFDNGLVTDLMPTIGRVSKAASADPIDTAKTAGALAGPLKIAAADM
EQSLAMLVVAGKLGAFEFKNMAKELPGLAAQMNNLGVTGKEAVASLGAGLQIAMKATDSPATAANNMKNFLAKLNAPETV
KNFEEAGVNLPAVKADAVAKGINPVEAVIQKLMDLTKVPQKEIDAIYKRSKDAGKTDVEAAEDVKSRIEQALAGSKVGKL
FGDMQALDFITPMRIYTQLYKQYTEAIKAADVGVIGRDSETQLAGLDSALKETAEISEQAGRRIGDGFAPVLLQVNKGLK
AALGWMREVDEAYPSLIDYTLLGVGAFLALVVALAALGPAFAIISAGFGVLLLLWSPIGAAIMGIAALAVLVWANWSTVG
PMFARMWEGIKTVFSGFVEWVAGIFTLDSKRAADGVRTMFEGLATIAGGLWDLVKVSWTGFVAWIDGWTAGAFTGAINGI
KAAWQGLIDWFKSHVPSFDIQMPDWVKRLYGGQMATLPAVDAPVNPMGDGTGWSAPGFAAPTAAAGTTKVGGEIIVRAEP
GTEARVQSDNPAVPMVQDRGLVLGRP

Sequences:

>Translated_666_residues
MSGKTLDVSILVRLVDRVTGPLSVLQRKFAGLAQLSQRIGILGAAVAGISFAVPLASAAAYDQQLRDMAVTAGEFGQGAE
RMIRKVGRDMEQLALKTGIASKALADARGVLVSGGFDNGLVTDLMPTIGRVSKAASADPIDTAKTAGALAGPLKIAAADM
EQSLAMLVVAGKLGAFEFKNMAKELPGLAAQMNNLGVTGKEAVASLGAGLQIAMKATDSPATAANNMKNFLAKLNAPETV
KNFEEAGVNLPAVKADAVAKGINPVEAVIQKLMDLTKVPQKEIDAIYKRSKDAGKTDVEAAEDVKSRIEQALAGSKVGKL
FGDMQALDFITPMRIYTQLYKQYTEAIKAADVGVIGRDSETQLAGLDSALKETAEISEQAGRRIGDGFAPVLLQVNKGLK
AALGWMREVDEAYPSLIDYTLLGVGAFLALVVALAALGPAFAIISAGFGVLLLLWSPIGAAIMGIAALAVLVWANWSTVG
PMFARMWEGIKTVFSGFVEWVAGIFTLDSKRAADGVRTMFEGLATIAGGLWDLVKVSWTGFVAWIDGWTAGAFTGAINGI
KAAWQGLIDWFKSHVPSFDIQMPDWVKRLYGGQMATLPAVDAPVNPMGDGTGWSAPGFAAPTAAAGTTKVGGEIIVRAEP
GTEARVQSDNPAVPMVQDRGLVLGRP
>Mature_665_residues
SGKTLDVSILVRLVDRVTGPLSVLQRKFAGLAQLSQRIGILGAAVAGISFAVPLASAAAYDQQLRDMAVTAGEFGQGAER
MIRKVGRDMEQLALKTGIASKALADARGVLVSGGFDNGLVTDLMPTIGRVSKAASADPIDTAKTAGALAGPLKIAAADME
QSLAMLVVAGKLGAFEFKNMAKELPGLAAQMNNLGVTGKEAVASLGAGLQIAMKATDSPATAANNMKNFLAKLNAPETVK
NFEEAGVNLPAVKADAVAKGINPVEAVIQKLMDLTKVPQKEIDAIYKRSKDAGKTDVEAAEDVKSRIEQALAGSKVGKLF
GDMQALDFITPMRIYTQLYKQYTEAIKAADVGVIGRDSETQLAGLDSALKETAEISEQAGRRIGDGFAPVLLQVNKGLKA
ALGWMREVDEAYPSLIDYTLLGVGAFLALVVALAALGPAFAIISAGFGVLLLLWSPIGAAIMGIAALAVLVWANWSTVGP
MFARMWEGIKTVFSGFVEWVAGIFTLDSKRAADGVRTMFEGLATIAGGLWDLVKVSWTGFVAWIDGWTAGAFTGAINGIK
AAWQGLIDWFKSHVPSFDIQMPDWVKRLYGGQMATLPAVDAPVNPMGDGTGWSAPGFAAPTAAAGTTKVGGEIIVRAEPG
TEARVQSDNPAVPMVQDRGLVLGRP

Specific function: Unknown

COG id: COG5283

COG function: function code S; Phage-related tail protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69688; Mature: 69556

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGKTLDVSILVRLVDRVTGPLSVLQRKFAGLAQLSQRIGILGAAVAGISFAVPLASAAA
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDQQLRDMAVTAGEFGQGAERMIRKVGRDMEQLALKTGIASKALADARGVLVSGGFDNGL
HHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHCHHHHHHHHHCCEEEECCCCCCH
VTDLMPTIGRVSKAASADPIDTAKTAGALAGPLKIAAADMEQSLAMLVVAGKLGAFEFKN
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MAKELPGLAAQMNNLGVTGKEAVASLGAGLQIAMKATDSPATAANNMKNFLAKLNAPETV
HHHHCCCHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHH
KNFEEAGVNLPAVKADAVAKGINPVEAVIQKLMDLTKVPQKEIDAIYKRSKDAGKTDVEA
HHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHH
AEDVKSRIEQALAGSKVGKLFGDMQALDFITPMRIYTQLYKQYTEAIKAADVGVIGRDSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC
TQLAGLDSALKETAEISEQAGRRIGDGFAPVLLQVNKGLKAALGWMREVDEAYPSLIDYT
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LLGVGAFLALVVALAALGPAFAIISAGFGVLLLLWSPIGAAIMGIAALAVLVWANWSTVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
PMFARMWEGIKTVFSGFVEWVAGIFTLDSKRAADGVRTMFEGLATIAGGLWDLVKVSWTG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVAWIDGWTAGAFTGAINGIKAAWQGLIDWFKSHVPSFDIQMPDWVKRLYGGQMATLPAV
HEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEECCCC
DAPVNPMGDGTGWSAPGFAAPTAAAGTTKVGGEIIVRAEPGTEARVQSDNPAVPMVQDRG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEECCCCCCCCEECCCC
LVLGRP
CCCCCC
>Mature Secondary Structure 
SGKTLDVSILVRLVDRVTGPLSVLQRKFAGLAQLSQRIGILGAAVAGISFAVPLASAAA
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDQQLRDMAVTAGEFGQGAERMIRKVGRDMEQLALKTGIASKALADARGVLVSGGFDNGL
HHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHCHHHHHHHHHCCEEEECCCCCCH
VTDLMPTIGRVSKAASADPIDTAKTAGALAGPLKIAAADMEQSLAMLVVAGKLGAFEFKN
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MAKELPGLAAQMNNLGVTGKEAVASLGAGLQIAMKATDSPATAANNMKNFLAKLNAPETV
HHHHCCCHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHH
KNFEEAGVNLPAVKADAVAKGINPVEAVIQKLMDLTKVPQKEIDAIYKRSKDAGKTDVEA
HHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHH
AEDVKSRIEQALAGSKVGKLFGDMQALDFITPMRIYTQLYKQYTEAIKAADVGVIGRDSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC
TQLAGLDSALKETAEISEQAGRRIGDGFAPVLLQVNKGLKAALGWMREVDEAYPSLIDYT
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LLGVGAFLALVVALAALGPAFAIISAGFGVLLLLWSPIGAAIMGIAALAVLVWANWSTVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
PMFARMWEGIKTVFSGFVEWVAGIFTLDSKRAADGVRTMFEGLATIAGGLWDLVKVSWTG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVAWIDGWTAGAFTGAINGIKAAWQGLIDWFKSHVPSFDIQMPDWVKRLYGGQMATLPAV
HEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEECCCC
DAPVNPMGDGTGWSAPGFAAPTAAAGTTKVGGEIIVRAEPGTEARVQSDNPAVPMVQDRG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEECCCCCCCCEECCCC
LVLGRP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA