| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is ymfQ [C]
Identifier: 154248401
GI number: 154248401
Start: 4974456
End: 4975061
Strand: Reverse
Name: ymfQ [C]
Synonym: Xaut_4481
Alternate gene names: 154248401
Gene position: 4975061-4974456 (Counterclockwise)
Preceding gene: 154248402
Following gene: 154248400
Centisome position: 93.71
GC content: 69.64
Gene sequence:
>606_bases ATGAGCCGCTCGGCCGAGACCATCCAGCGCGAGGGGTTGTCCCTGTACTGGCCGAGCGACGTGATCGCTCCGGTGCCGGG CGGCGTGATCGCCGCCGTGGTGGAGGCGTTCGCGGGCCTGCTGGCAGACGTCGAGGCGACCGCCGAGGCGATGGTCGACG AGTTCGATCCGCGCACGGCGGTGCTCTGCCTGCCGGACTTCGAGCGCGTGCTGGGGGCGGACCCGTGCGGGCGCGACGTC TCCACCATGAACCTGCCGGCACGCCAGCAGTTCGCCCACCAGCGCTGGACGGCCCGCGGCGGCCAGTCGATCCCCTATTT CGTCGGGCTCGCGGCCAAGCGCGGCGTCGCCATCACCATCGAGGAGGTCCACCTCAGCGAGGTGGATGCGGTCGAGGTGG ACTTCGAGCTGGTGGAGCCACCCGAGCAATTCATCTGGACCGTCCAGATCCCGCTCGGCTCCTGGACCGACTTCATCGTC GACGAGTCCGGTGCAGACGAGCTGCTCTACGACTTCACCCTGGCCGACATCGAGTGCGACATCATGCGGGCCGCCCCCGC GCACACCCGTGTCGTCTTCACGTACCTGCCCGGCGAGGAGGGCTGA
Upstream 100 bases:
>100_bases CGGGCGAGTACCGCCATGAGCTGTCGGTGCCGGCCGCCGACGTAGTGCCCACCGACATCCAGCTGCCGGTGCCCGGCGCG CTCACCTGGGCGGCGCTGCC
Downstream 100 bases:
>100_bases TCCATGGACCGCATTACCGGCACCAACACGGCCGATCTCGGCGGCGGCAAGCGGGGCTTCCGGGGCCGCGATACCAATGC CGGGTTGCCCGGCACCCGGC
Product: tail protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MSRSAETIQREGLSLYWPSDVIAPVPGGVIAAVVEAFAGLLADVEATAEAMVDEFDPRTAVLCLPDFERVLGADPCGRDV STMNLPARQQFAHQRWTARGGQSIPYFVGLAAKRGVAITIEEVHLSEVDAVEVDFELVEPPEQFIWTVQIPLGSWTDFIV DESGADELLYDFTLADIECDIMRAAPAHTRVVFTYLPGEEG
Sequences:
>Translated_201_residues MSRSAETIQREGLSLYWPSDVIAPVPGGVIAAVVEAFAGLLADVEATAEAMVDEFDPRTAVLCLPDFERVLGADPCGRDV STMNLPARQQFAHQRWTARGGQSIPYFVGLAAKRGVAITIEEVHLSEVDAVEVDFELVEPPEQFIWTVQIPLGSWTDFIV DESGADELLYDFTLADIECDIMRAAPAHTRVVFTYLPGEEG >Mature_200_residues SRSAETIQREGLSLYWPSDVIAPVPGGVIAAVVEAFAGLLADVEATAEAMVDEFDPRTAVLCLPDFERVLGADPCGRDVS TMNLPARQQFAHQRWTARGGQSIPYFVGLAAKRGVAITIEEVHLSEVDAVEVDFELVEPPEQFIWTVQIPLGSWTDFIVD ESGADELLYDFTLADIECDIMRAAPAHTRVVFTYLPGEEG
Specific function: Unknown
COG id: COG3778
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21970; Mature: 21839
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSAETIQREGLSLYWPSDVIAPVPGGVIAAVVEAFAGLLADVEATAEAMVDEFDPRTA CCCCHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE VLCLPDFERVLGADPCGRDVSTMNLPARQQFAHQRWTARGGQSIPYFVGLAAKRGVAITI EEECCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEE EEVHLSEVDAVEVDFELVEPPEQFIWTVQIPLGSWTDFIVDESGADELLYDFTLADIECD EEEECCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCCCEEEEEEEECCEEE IMRAAPAHTRVVFTYLPGEEG EEECCCCCEEEEEEECCCCCC >Mature Secondary Structure SRSAETIQREGLSLYWPSDVIAPVPGGVIAAVVEAFAGLLADVEATAEAMVDEFDPRTA CCCHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE VLCLPDFERVLGADPCGRDVSTMNLPARQQFAHQRWTARGGQSIPYFVGLAAKRGVAITI EEECCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEE EEVHLSEVDAVEVDFELVEPPEQFIWTVQIPLGSWTDFIVDESGADELLYDFTLADIECD EEEECCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCCCEEEEEEEECCEEE IMRAAPAHTRVVFTYLPGEEG EEECCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA