Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is ymfQ [C]

Identifier: 154248401

GI number: 154248401

Start: 4974456

End: 4975061

Strand: Reverse

Name: ymfQ [C]

Synonym: Xaut_4481

Alternate gene names: 154248401

Gene position: 4975061-4974456 (Counterclockwise)

Preceding gene: 154248402

Following gene: 154248400

Centisome position: 93.71

GC content: 69.64

Gene sequence:

>606_bases
ATGAGCCGCTCGGCCGAGACCATCCAGCGCGAGGGGTTGTCCCTGTACTGGCCGAGCGACGTGATCGCTCCGGTGCCGGG
CGGCGTGATCGCCGCCGTGGTGGAGGCGTTCGCGGGCCTGCTGGCAGACGTCGAGGCGACCGCCGAGGCGATGGTCGACG
AGTTCGATCCGCGCACGGCGGTGCTCTGCCTGCCGGACTTCGAGCGCGTGCTGGGGGCGGACCCGTGCGGGCGCGACGTC
TCCACCATGAACCTGCCGGCACGCCAGCAGTTCGCCCACCAGCGCTGGACGGCCCGCGGCGGCCAGTCGATCCCCTATTT
CGTCGGGCTCGCGGCCAAGCGCGGCGTCGCCATCACCATCGAGGAGGTCCACCTCAGCGAGGTGGATGCGGTCGAGGTGG
ACTTCGAGCTGGTGGAGCCACCCGAGCAATTCATCTGGACCGTCCAGATCCCGCTCGGCTCCTGGACCGACTTCATCGTC
GACGAGTCCGGTGCAGACGAGCTGCTCTACGACTTCACCCTGGCCGACATCGAGTGCGACATCATGCGGGCCGCCCCCGC
GCACACCCGTGTCGTCTTCACGTACCTGCCCGGCGAGGAGGGCTGA

Upstream 100 bases:

>100_bases
CGGGCGAGTACCGCCATGAGCTGTCGGTGCCGGCCGCCGACGTAGTGCCCACCGACATCCAGCTGCCGGTGCCCGGCGCG
CTCACCTGGGCGGCGCTGCC

Downstream 100 bases:

>100_bases
TCCATGGACCGCATTACCGGCACCAACACGGCCGATCTCGGCGGCGGCAAGCGGGGCTTCCGGGGCCGCGATACCAATGC
CGGGTTGCCCGGCACCCGGC

Product: tail protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MSRSAETIQREGLSLYWPSDVIAPVPGGVIAAVVEAFAGLLADVEATAEAMVDEFDPRTAVLCLPDFERVLGADPCGRDV
STMNLPARQQFAHQRWTARGGQSIPYFVGLAAKRGVAITIEEVHLSEVDAVEVDFELVEPPEQFIWTVQIPLGSWTDFIV
DESGADELLYDFTLADIECDIMRAAPAHTRVVFTYLPGEEG

Sequences:

>Translated_201_residues
MSRSAETIQREGLSLYWPSDVIAPVPGGVIAAVVEAFAGLLADVEATAEAMVDEFDPRTAVLCLPDFERVLGADPCGRDV
STMNLPARQQFAHQRWTARGGQSIPYFVGLAAKRGVAITIEEVHLSEVDAVEVDFELVEPPEQFIWTVQIPLGSWTDFIV
DESGADELLYDFTLADIECDIMRAAPAHTRVVFTYLPGEEG
>Mature_200_residues
SRSAETIQREGLSLYWPSDVIAPVPGGVIAAVVEAFAGLLADVEATAEAMVDEFDPRTAVLCLPDFERVLGADPCGRDVS
TMNLPARQQFAHQRWTARGGQSIPYFVGLAAKRGVAITIEEVHLSEVDAVEVDFELVEPPEQFIWTVQIPLGSWTDFIVD
ESGADELLYDFTLADIECDIMRAAPAHTRVVFTYLPGEEG

Specific function: Unknown

COG id: COG3778

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21970; Mature: 21839

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSAETIQREGLSLYWPSDVIAPVPGGVIAAVVEAFAGLLADVEATAEAMVDEFDPRTA
CCCCHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VLCLPDFERVLGADPCGRDVSTMNLPARQQFAHQRWTARGGQSIPYFVGLAAKRGVAITI
EEECCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEE
EEVHLSEVDAVEVDFELVEPPEQFIWTVQIPLGSWTDFIVDESGADELLYDFTLADIECD
EEEECCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCCCEEEEEEEECCEEE
IMRAAPAHTRVVFTYLPGEEG
EEECCCCCEEEEEEECCCCCC
>Mature Secondary Structure 
SRSAETIQREGLSLYWPSDVIAPVPGGVIAAVVEAFAGLLADVEATAEAMVDEFDPRTA
CCCHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VLCLPDFERVLGADPCGRDVSTMNLPARQQFAHQRWTARGGQSIPYFVGLAAKRGVAITI
EEECCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEE
EEVHLSEVDAVEVDFELVEPPEQFIWTVQIPLGSWTDFIVDESGADELLYDFTLADIECD
EEEECCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCCCEEEEEEEECCEEE
IMRAAPAHTRVVFTYLPGEEG
EEECCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA