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The map label for this gene is stfE [C]

Identifier: 154248400

GI number: 154248400

Start: 4972974

End: 4974452

Strand: Reverse

Name: stfE [C]

Synonym: Xaut_4480

Alternate gene names: 154248400

Gene position: 4974452-4972974 (Counterclockwise)

Preceding gene: 154248401

Following gene: 154248398

Centisome position: 93.7

GC content: 70.66

Gene sequence:

>1479_bases
ATGGACCGCATTACCGGCACCAACACGGCCGATCTCGGCGGCGGCAAGCGGGGCTTCCGGGGCCGCGATACCAATGCCGG
GTTGCCCGGCACCCGGCTGACGGCAGGCTGGGCGAATGCCGTCCAGGAGGAGTTGCTCGCGGTCATCGAAGAAGGCGGGC
TCGTGCCCTCGGATGCCGATCGCGCCCAGATCGCGGAGGTGCTGCGCAGGTTGGTGCAGCAGGGCATCTGGACCTATGCG
GCCGCCGGCGGCACCGCCAACGCCCTGACGCTGGCGGTCACGCCGGCGCCGACGCTGGCCACCGGCCTCAGCCTGCTGAT
CAAGGTGGCTACCAGCAACACTGGCGCCGCCACGCTCAACATCAATGGCGGCGGAGCGCTTGCGATCGTGCGGCGCGACG
GCTCCGCCCTGCAGGCGGGCGACCTGCCCGCCGGGGGCATGGTGCAGATCAGCTACGATGGCGCGGCGTGGCAGCTGGTC
CACACGCCGCAGAGCGGCGCGACGGGCCTGCCGATCCTGCCCTACGTGGCGGCCACCGGCAGCGCCAATGCGCTGGTGGC
CACCTTCGCCCCGGCACTGCCCCAGCTCGGCAACGGCCTGGCGATCGAGGTCAAGATCGCCGCCACCAACACCGGCGCGG
CCACCATCAACGTCAACGCCCTTGGCGCCAAGTCTGTGCTGCGCTCGGACGGCTCGGCCCTGCGCGCCGGCGACATGGTG
GCCGGCCAGGTCGCCCTGATGATCTATGACGGCGCCGCGTTCCGGTGCGCCGGCGTGAGCCCGCCGCGCGGCGAGATCAT
CTATGTGGCAGCCGCCGGCACCGGCGACATCATCACCGCCGCGCCGACGCCCGCCCTGGTGAGCTATTTCGAGGGGCTGA
TGCTGTCCCTCAAGGTGCTGGCCGACAACACGGGCGGCGCCACCATCAACGTCAGCACCCTCGGCGCGAAGTCCATCCTG
CGTCGGGACGGCACCGCCGTCATCGCCGGCGACCTGGTGGCGGGCGAGATGGTGGTCCTCGTCTATGACGGGGCTTCCTT
CCGCCTCCTCCAGTCCGGCCGACCCCGGCCCGGCACCATTGCCATGTGGCCGGCCAGCACCCCGCCTTCCGGCGCCCTGG
TGCGCAATGGCGCGACGCTTTCGCGCACCGTCTATGCATCGCTGTTCGCGGTCATCGGCACGACCTTCGGCGCAGGGGAC
GGAGCCACGACGTTCGGCGTCCCCAATGATCTCGGCATCTTCGTGCGCGGCTGGGACAACGGCCGCGGGTACGACACAGG
CCGCGTCTTCGGCTCTGAGCAGGCCGACGACAACAAGAGCCACGACCATGCCCGGCAGACGGTCAGCGGCGTCTTCACCG
CCGGCGGCGCGGGCTTCGCCCTGCAGGACAGCGGCAGCACCACGCAAAGGGTGGCGTCATCGGGCGGAGCTGAGGCGCGC
CCAAAAAACCGGGCGTATTTGCCCATCATCTACTTCTGA

Upstream 100 bases:

>100_bases
CGACTTCACCCTGGCCGACATCGAGTGCGACATCATGCGGGCCGCCCCCGCGCACACCCGTGTCGTCTTCACGTACCTGC
CCGGCGAGGAGGGCTGATCC

Downstream 100 bases:

>100_bases
GGGGGTGTTCGTGCAGTATCGCATCGTTCACCAGTATGACCTGACCGGCTTTTATGTCGGTGAGGGTCAGGCCTGGGAAT
CGCCGCTTGAACCCGGCGTC

Product: tail collar domain-containing protein

Products: NA

Alternate protein names: Phage Related Protein; Tail Collar Domain-Containing Protein; Phage Tail Fiber Protein; Tail Fiber-Related Protein; Side Tail Fiber Protein Fragment; Tail Fiber Protein GpH

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MDRITGTNTADLGGGKRGFRGRDTNAGLPGTRLTAGWANAVQEELLAVIEEGGLVPSDADRAQIAEVLRRLVQQGIWTYA
AAGGTANALTLAVTPAPTLATGLSLLIKVATSNTGAATLNINGGGALAIVRRDGSALQAGDLPAGGMVQISYDGAAWQLV
HTPQSGATGLPILPYVAATGSANALVATFAPALPQLGNGLAIEVKIAATNTGAATINVNALGAKSVLRSDGSALRAGDMV
AGQVALMIYDGAAFRCAGVSPPRGEIIYVAAAGTGDIITAAPTPALVSYFEGLMLSLKVLADNTGGATINVSTLGAKSIL
RRDGTAVIAGDLVAGEMVVLVYDGASFRLLQSGRPRPGTIAMWPASTPPSGALVRNGATLSRTVYASLFAVIGTTFGAGD
GATTFGVPNDLGIFVRGWDNGRGYDTGRVFGSEQADDNKSHDHARQTVSGVFTAGGAGFALQDSGSTTQRVASSGGAEAR
PKNRAYLPIIYF

Sequences:

>Translated_492_residues
MDRITGTNTADLGGGKRGFRGRDTNAGLPGTRLTAGWANAVQEELLAVIEEGGLVPSDADRAQIAEVLRRLVQQGIWTYA
AAGGTANALTLAVTPAPTLATGLSLLIKVATSNTGAATLNINGGGALAIVRRDGSALQAGDLPAGGMVQISYDGAAWQLV
HTPQSGATGLPILPYVAATGSANALVATFAPALPQLGNGLAIEVKIAATNTGAATINVNALGAKSVLRSDGSALRAGDMV
AGQVALMIYDGAAFRCAGVSPPRGEIIYVAAAGTGDIITAAPTPALVSYFEGLMLSLKVLADNTGGATINVSTLGAKSIL
RRDGTAVIAGDLVAGEMVVLVYDGASFRLLQSGRPRPGTIAMWPASTPPSGALVRNGATLSRTVYASLFAVIGTTFGAGD
GATTFGVPNDLGIFVRGWDNGRGYDTGRVFGSEQADDNKSHDHARQTVSGVFTAGGAGFALQDSGSTTQRVASSGGAEAR
PKNRAYLPIIYF
>Mature_492_residues
MDRITGTNTADLGGGKRGFRGRDTNAGLPGTRLTAGWANAVQEELLAVIEEGGLVPSDADRAQIAEVLRRLVQQGIWTYA
AAGGTANALTLAVTPAPTLATGLSLLIKVATSNTGAATLNINGGGALAIVRRDGSALQAGDLPAGGMVQISYDGAAWQLV
HTPQSGATGLPILPYVAATGSANALVATFAPALPQLGNGLAIEVKIAATNTGAATINVNALGAKSVLRSDGSALRAGDMV
AGQVALMIYDGAAFRCAGVSPPRGEIIYVAAAGTGDIITAAPTPALVSYFEGLMLSLKVLADNTGGATINVSTLGAKSIL
RRDGTAVIAGDLVAGEMVVLVYDGASFRLLQSGRPRPGTIAMWPASTPPSGALVRNGATLSRTVYASLFAVIGTTFGAGD
GATTFGVPNDLGIFVRGWDNGRGYDTGRVFGSEQADDNKSHDHARQTVSGVFTAGGAGFALQDSGSTTQRVASSGGAEAR
PKNRAYLPIIYF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49738; Mature: 49738

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRITGTNTADLGGGKRGFRGRDTNAGLPGTRLTAGWANAVQEELLAVIEEGGLVPSDAD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCC
RAQIAEVLRRLVQQGIWTYAAAGGTANALTLAVTPAPTLATGLSLLIKVATSNTGAATLN
HHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCHHHHHHEEEEEEEECCCCEEEEE
INGGGALAIVRRDGSALQAGDLPAGGMVQISYDGAAWQLVHTPQSGATGLPILPYVAATG
ECCCCEEEEEEECCCEEECCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHEEECCC
SANALVATFAPALPQLGNGLAIEVKIAATNTGAATINVNALGAKSVLRSDGSALRAGDMV
CCCEEEEHHHHHHHHHCCCEEEEEEEEEECCCEEEEEEECCCHHHHHHCCCCEEECCCEE
AGQVALMIYDGAAFRCAGVSPPRGEIIYVAAAGTGDIITAAPTPALVSYFEGLMLSLKVL
ECEEEEEEECCCEEEEECCCCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHEEEEEE
ADNTGGATINVSTLGAKSILRRDGTAVIAGDLVAGEMVVLVYDGASFRLLQSGRPRPGTI
ECCCCCCEEEEECCCHHHHHHCCCCEEEEECEEECEEEEEEECCCCEEEEECCCCCCCEE
AMWPASTPPSGALVRNGATLSRTVYASLFAVIGTTFGAGDGATTFGVPNDLGIFVRGWDN
EECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEEEEECC
GRGYDTGRVFGSEQADDNKSHDHARQTVSGVFTAGGAGFALQDSGSTTQRVASSGGAEAR
CCCCCCCEECCCCCCCCCCCHHHHHHHHHHEEECCCCCEEEECCCCHHHHHHHCCCCCCC
PKNRAYLPIIYF
CCCCEEEEEEEC
>Mature Secondary Structure
MDRITGTNTADLGGGKRGFRGRDTNAGLPGTRLTAGWANAVQEELLAVIEEGGLVPSDAD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCC
RAQIAEVLRRLVQQGIWTYAAAGGTANALTLAVTPAPTLATGLSLLIKVATSNTGAATLN
HHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCHHHHHHEEEEEEEECCCCEEEEE
INGGGALAIVRRDGSALQAGDLPAGGMVQISYDGAAWQLVHTPQSGATGLPILPYVAATG
ECCCCEEEEEEECCCEEECCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHEEECCC
SANALVATFAPALPQLGNGLAIEVKIAATNTGAATINVNALGAKSVLRSDGSALRAGDMV
CCCEEEEHHHHHHHHHCCCEEEEEEEEEECCCEEEEEEECCCHHHHHHCCCCEEECCCEE
AGQVALMIYDGAAFRCAGVSPPRGEIIYVAAAGTGDIITAAPTPALVSYFEGLMLSLKVL
ECEEEEEEECCCEEEEECCCCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHEEEEEE
ADNTGGATINVSTLGAKSILRRDGTAVIAGDLVAGEMVVLVYDGASFRLLQSGRPRPGTI
ECCCCCCEEEEECCCHHHHHHCCCCEEEEECEEECEEEEEEECCCCEEEEECCCCCCCEE
AMWPASTPPSGALVRNGATLSRTVYASLFAVIGTTFGAGDGATTFGVPNDLGIFVRGWDN
EECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEEEEECC
GRGYDTGRVFGSEQADDNKSHDHARQTVSGVFTAGGAGFALQDSGSTTQRVASSGGAEAR
CCCCCCCEECCCCCCCCCCCHHHHHHHHHHEEECCCCCEEEECCCCHHHHHHHCCCCCCC
PKNRAYLPIIYF
CCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA