| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154248391
Identifier: 154248391
GI number: 154248391
Start: 4963133
End: 4963804
Strand: Direct
Name: 154248391
Synonym: Xaut_4471
Alternate gene names: NA
Gene position: 4963133-4963804 (Clockwise)
Preceding gene: 154248379
Following gene: 154248394
Centisome position: 93.49
GC content: 65.03
Gene sequence:
>672_bases ATGCCAGAAGTGATCTTCCCCGGCGAAAAGGGGCGCCTTGAAGGCCGCTACCAGCCCGCCAAGACCCGCAATGCGCCCAT CGCCATCATTCTTCATCCGCACCCGCAGTTCGGCGGGACGATGAACAATCCTGTCGTGTACAATTTGTACTACCAGTTCG CGAACCGCGGCTTCTCGGTGCTGCGTTTCAATTTCCGGGGCGTCGGCCGCTCCCAGGGGTCGTTCGACCACGGCACGGGC GAACTGTCCGACGCCGCCGCGGCGCTCGACTGGGCCCAGTCCATCAACCCGGATGCGCGGGCGTGCTGGATCGCCGGCTT CTCCTTCGGCGCGTGGATCGGCATGCAGCTGCTCATGCGTCGTCCGGAGGTGGAGGGCTTCATCTCCATCGCCGCGCCGG CGAACCTCTACGATTTCTCCTTCCTCGCCCCCTGCCCGTCCTCCGGCCTGTTCGTCCATGGCGACAAGGATGCGGTGGTG CCCACCTCCGCAGTGCAGACGCTGGTGGAAAAGCTGAAGACGCAGAAGGGCATCGTCATCGAGCAGCAGGTGGTGCCCGG CGCCAACCACTTCTTCGACGGCAAGACCGAAGACCTGATGGGCGTGGTGGGCACCTATCTCGACAAGCGCCTGCCCGGCA CCCGCAAGGACAGCAAGGACAGCGCCGCCTGA
Upstream 100 bases:
>100_bases TTAGGGTGATGCTGGCAGGTTCGTCCCCGAGAGTCGCGCTTTCCGGGCGGGATCCGCTTCATCCTGTGCGTCATTGCCAC CCAGAGGTTGTAAAACTTCC
Downstream 100 bases:
>100_bases GGGCAATCCTTCCGCCGTCCCAGCTTTCCTGAACGGCCGGCCCTGTGGGTCGGCCGTTTTTGCGAGAAGATCCGACTAGA CCCGGACCTCCGGCTCTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MPEVIFPGEKGRLEGRYQPAKTRNAPIAIILHPHPQFGGTMNNPVVYNLYYQFANRGFSVLRFNFRGVGRSQGSFDHGTG ELSDAAAALDWAQSINPDARACWIAGFSFGAWIGMQLLMRRPEVEGFISIAAPANLYDFSFLAPCPSSGLFVHGDKDAVV PTSAVQTLVEKLKTQKGIVIEQQVVPGANHFFDGKTEDLMGVVGTYLDKRLPGTRKDSKDSAA
Sequences:
>Translated_223_residues MPEVIFPGEKGRLEGRYQPAKTRNAPIAIILHPHPQFGGTMNNPVVYNLYYQFANRGFSVLRFNFRGVGRSQGSFDHGTG ELSDAAAALDWAQSINPDARACWIAGFSFGAWIGMQLLMRRPEVEGFISIAAPANLYDFSFLAPCPSSGLFVHGDKDAVV PTSAVQTLVEKLKTQKGIVIEQQVVPGANHFFDGKTEDLMGVVGTYLDKRLPGTRKDSKDSAA >Mature_222_residues PEVIFPGEKGRLEGRYQPAKTRNAPIAIILHPHPQFGGTMNNPVVYNLYYQFANRGFSVLRFNFRGVGRSQGSFDHGTGE LSDAAAALDWAQSINPDARACWIAGFSFGAWIGMQLLMRRPEVEGFISIAAPANLYDFSFLAPCPSSGLFVHGDKDAVVP TSAVQTLVEKLKTQKGIVIEQQVVPGANHFFDGKTEDLMGVVGTYLDKRLPGTRKDSKDSAA
Specific function: Unknown
COG id: COG2945
COG function: function code R; Predicted hydrolase of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15 [H]
EC number: NA
Molecular weight: Translated: 24335; Mature: 24204
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEVIFPGEKGRLEGRYQPAKTRNAPIAIILHPHPQFGGTMNNPVVYNLYYQFANRGFSV CCCEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEHHHHHCCEEE LRFNFRGVGRSQGSFDHGTGELSDAAAALDWAQSINPDARACWIAGFSFGAWIGMQLLMR EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHH RPEVEGFISIAAPANLYDFSFLAPCPSSGLFVHGDKDAVVPTSAVQTLVEKLKTQKGIVI CCCCCEEEEEECCCCCCCCEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCEEE EQQVVPGANHFFDGKTEDLMGVVGTYLDKRLPGTRKDSKDSAA EEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PEVIFPGEKGRLEGRYQPAKTRNAPIAIILHPHPQFGGTMNNPVVYNLYYQFANRGFSV CCEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEHHHHHCCEEE LRFNFRGVGRSQGSFDHGTGELSDAAAALDWAQSINPDARACWIAGFSFGAWIGMQLLMR EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHH RPEVEGFISIAAPANLYDFSFLAPCPSSGLFVHGDKDAVVPTSAVQTLVEKLKTQKGIVI CCCCCEEEEEECCCCCCCCEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCEEE EQQVVPGANHFFDGKTEDLMGVVGTYLDKRLPGTRKDSKDSAA EEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]