| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is fabH [H]
Identifier: 154248305
GI number: 154248305
Start: 4860877
End: 4861851
Strand: Direct
Name: fabH [H]
Synonym: Xaut_4385
Alternate gene names: 154248305
Gene position: 4860877-4861851 (Clockwise)
Preceding gene: 154248304
Following gene: 154248306
Centisome position: 91.56
GC content: 69.13
Gene sequence:
>975_bases GTGAGCGGAATCAGGTCCGTCGCCCGGGGATCCGGGTCCTATCTCCCCGAGAGGGTGCTCTCGAACGACGATCTCGCGCG GCGCATCGACACGACCGACGACTGGATCGTGCAGCGCACCGGCATCCGCCAGCGCCATATCGCCGCCGAGGGCGAGTTCA CCTCGCATCTCGCGCTGAAGGCGGCCGAGCGGGCGCTCGCCGACGCAGGCTTTGCCGCGCGCGACATTGACCTCATCATC CTCGCCACCGCCACGCCGGACCAGACTTTCCCCGCCACCTCGGTGACGGTGCAGGCGGAGCTGGGCATCACCCGCGGCGC CGCCTTCGACGTGCAGGCGGTGTGCTCCGGCTTCGTGTTCGCCCTTGCCACCGCCGATGCCTATCTGAAGACCGGCGCCT TCGACCGGGCGCTGGTGATCGGGGCGGAGACCTTTTCCCGCATCCTCGACTGGGAGGATCGCGGCACCTGCGTGCTGTTC GGCGACGGGGCAGGGGCCATGGTGCTGGAAGCGGTGCGGGAGGACGACGCCCACGGCGCCGGCCTTCTCACCTCGCACCT GCGCTCGGACGGGCGGCACCGCACCAAGCTGTTCGTGGACGGCGGCCCCTCCACCACGGGAACCGTGGGCCACCTGCGCA TGGAGGGCCGCGAGGTGTTCAAGCATGCGGTGGGCATGATCACCGACGTGATCGAGGACGCCTTCGCCGCCACCGGCGAA AGCGCCGCGAGCATCGACTGGTTCGTGCCCCATCAGGCCAATCGCCGCATTATCGACGCCAGCGCGCTGAAGCTGGGCAT CGCCCCCGAAAAGGTGGTGACCACGGTGGACCAGCACGGAAATACCTCAGCCGCCTCCATTCCGCTGGCCTTCGACCTTG CGGTCAGGGACGGGCGCATCAAGCGGGGCGATCTGGTGCTGCTGGAGGCCATGGGCGGAGGTTTCACCTGGGGATCGGCC CTCCTGCGCTGGTAA
Upstream 100 bases:
>100_bases GCAACGAGCTTCTCGCGCGTATTGAAAAGAGCCTCGTCGGCCGCCAGCCGCCGGACGTAGCAGCATGCCGGCCGCAGGCC GCAGGGGTGGAAGGCCAATC
Downstream 100 bases:
>100_bases TTGATTTAAGTCGTTGACCGACCTTGGCAAGCGCGGCTAGTTTGCGTCGCACATCCTTCGCCAGTACTGGGTCGCTTTAC GGCGTGCGGCGATCTTTCCG
Product: 3-oxoacyl-(acyl-carrier-protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSGIRSVARGSGSYLPERVLSNDDLARRIDTTDDWIVQRTGIRQRHIAAEGEFTSHLALKAAERALADAGFAARDIDLII LATATPDQTFPATSVTVQAELGITRGAAFDVQAVCSGFVFALATADAYLKTGAFDRALVIGAETFSRILDWEDRGTCVLF GDGAGAMVLEAVREDDAHGAGLLTSHLRSDGRHRTKLFVDGGPSTTGTVGHLRMEGREVFKHAVGMITDVIEDAFAATGE SAASIDWFVPHQANRRIIDASALKLGIAPEKVVTTVDQHGNTSAASIPLAFDLAVRDGRIKRGDLVLLEAMGGGFTWGSA LLRW
Sequences:
>Translated_324_residues MSGIRSVARGSGSYLPERVLSNDDLARRIDTTDDWIVQRTGIRQRHIAAEGEFTSHLALKAAERALADAGFAARDIDLII LATATPDQTFPATSVTVQAELGITRGAAFDVQAVCSGFVFALATADAYLKTGAFDRALVIGAETFSRILDWEDRGTCVLF GDGAGAMVLEAVREDDAHGAGLLTSHLRSDGRHRTKLFVDGGPSTTGTVGHLRMEGREVFKHAVGMITDVIEDAFAATGE SAASIDWFVPHQANRRIIDASALKLGIAPEKVVTTVDQHGNTSAASIPLAFDLAVRDGRIKRGDLVLLEAMGGGFTWGSA LLRW >Mature_323_residues SGIRSVARGSGSYLPERVLSNDDLARRIDTTDDWIVQRTGIRQRHIAAEGEFTSHLALKAAERALADAGFAARDIDLIIL ATATPDQTFPATSVTVQAELGITRGAAFDVQAVCSGFVFALATADAYLKTGAFDRALVIGAETFSRILDWEDRGTCVLFG DGAGAMVLEAVREDDAHGAGLLTSHLRSDGRHRTKLFVDGGPSTTGTVGHLRMEGREVFKHAVGMITDVIEDAFAATGES AASIDWFVPHQANRRIIDASALKLGIAPEKVVTTVDQHGNTSAASIPLAFDLAVRDGRIKRGDLVLLEAMGGGFTWGSAL LRW
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=316, Percent_Identity=50, Blast_Score=309, Evalue=1e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 34531; Mature: 34400
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGIRSVARGSGSYLPERVLSNDDLARRIDTTDDWIVQRTGIRQRHIAAEGEFTSHLALK CCCHHHHHCCCCCCCHHHHCCCCHHHHHCCCCCHHHEECCCCCHHHEECCCCHHHHHHHH AAERALADAGFAARDIDLIILATATPDQTFPATSVTVQAELGITRGAAFDVQAVCSGFVF HHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH ALATADAYLKTGAFDRALVIGAETFSRILDWEDRGTCVLFGDGAGAMVLEAVREDDAHGA HHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCCCC GLLTSHLRSDGRHRTKLFVDGGPSTTGTVGHLRMEGREVFKHAVGMITDVIEDAFAATGE HHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCC SAASIDWFVPHQANRRIIDASALKLGIAPEKVVTTVDQHGNTSAASIPLAFDLAVRDGRI CCCEEEEECCCCCCCEEEEHHHEEECCCCHHHHHHHHCCCCCCCEECCEEEEEEECCCCC KRGDLVLLEAMGGGFTWGSALLRW CCCCEEEEEECCCCEEHHHHHHCC >Mature Secondary Structure SGIRSVARGSGSYLPERVLSNDDLARRIDTTDDWIVQRTGIRQRHIAAEGEFTSHLALK CCHHHHHCCCCCCCHHHHCCCCHHHHHCCCCCHHHEECCCCCHHHEECCCCHHHHHHHH AAERALADAGFAARDIDLIILATATPDQTFPATSVTVQAELGITRGAAFDVQAVCSGFVF HHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH ALATADAYLKTGAFDRALVIGAETFSRILDWEDRGTCVLFGDGAGAMVLEAVREDDAHGA HHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCCCC GLLTSHLRSDGRHRTKLFVDGGPSTTGTVGHLRMEGREVFKHAVGMITDVIEDAFAATGE HHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCC SAASIDWFVPHQANRRIIDASALKLGIAPEKVVTTVDQHGNTSAASIPLAFDLAVRDGRI CCCEEEEECCCCCCCEEEEHHHEEECCCCHHHHHHHHCCCCCCCEECCEEEEEEECCCCC KRGDLVLLEAMGGGFTWGSALLRW CCCCEEEEEECCCCEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]