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The map label for this gene is ctaA

Identifier: 154248258

GI number: 154248258

Start: 4809968

End: 4811059

Strand: Reverse

Name: ctaA

Synonym: Xaut_4338

Alternate gene names: 154248258

Gene position: 4811059-4809968 (Counterclockwise)

Preceding gene: 154248260

Following gene: 154248255

Centisome position: 90.62

GC content: 68.32

Gene sequence:

>1092_bases
ATGCCGCACGTCGAGGCCATCACACTCACCCGCGACCGACGCGGCCCCGGTCTTGGCGCCGTGCGCCTGTGGCTTTATGC
CGTCGCGGCGCTGATCATCGCCATGGTGGTGGTGGGGGGCGCGACGCGCCTGACCGAATCGGGACTTTCCATCACCGAGT
GGAAACCGGTCACCGGCGCCCTGCCCCCACTCTCGCAGGCCGACTGGCAGGCCGAGTTCGACAAGTACCAGGCTATTCCC
CAGTACGAGATCCTCAACAAGGGCATGGGGCTGGAGGCTTTCAAGCGGATCTACTGGTGGGAATGGGGCCATCGCCTGCT
CGGCCGCCTCATCGGCTTTGCCTTCCTGTTGCCCTTCCTCTGGTTCGCCTGGCGTGGCGTGCTGCGCGGGCGCCTTCTGG
CAAAGTGCCTGGTGCTGTTCCTGCTGGGCGGCCTTCAGGGCGCAGTAGGATGGTGGATGGTGGCGTCGGGCCTCACGGCG
CGGGTCTCAGTGAGCCAGTACCGCCTCGCCATCCACCTGACGCTGGCCTGCATCATCCTGTCCGCCATCGTGGCGGTCGC
CCGCTCCCTGTCACCGGAGCCGCGTCAGGTGGTGGGTGGGCGTCTGCGGGCCACGGCTTGGGCGCTGGTGGCGCTGGTGC
TGGTGCAGATCTTCGCCGGCGGGCTGGTGGCCGGGCTCGATGCCGGTATGGCCTTCAATACGTGGCCGCTCATGGACGGC
CACCTCATTCCCCCGGCAGCCCAGCTGGCGGCGGCGGACCCGTTCTGGCGCAACCTGTTCGAGAATGCGCTGACGGTGCA
GTTCAACCACCGCATGATCGCCTATGCCCTATGGACCCTCACGCTGCTCCATGCGCTGGATGCCCGGCGGGCGGGTGGCG
CTGTGGCACAGCGGGCGTGGGTGCTGTTCGCGCTCGTCACCGCGCAGGCGTCGCTCGGCATCCTGACGCTGATCCACCAG
GTGCCCATCGATCTGGCGCTGGCCCACCAGTTCGGTGCTACCCTGGTGCTGGTGGTGGCGACGCTGCATCTGGGCGGGCT
TTCCGGGCAGGTGGAACCGGCCACGCCCAAGCTGCGGCTGGTGAAGGGGTGA

Upstream 100 bases:

>100_bases
AACATGCGATCATTCGTCTTGCGCGCATCGCGGGAGAGGACGCGGATCGGCCTCACCGATCCTGATCCAGCCCCGGGATC
GCAGGGAAACTGAGGGACAC

Downstream 100 bases:

>100_bases
GGCCTGGAAAATCCTGTTTTCCCCGAATGCTGTAGCCGGGTCCTCTCAGATTGATTCAATCTGTGAGGATCCGGCGCCAA
CCCTCAGGCCATCAAGGCGG

Product: cytochrome oxidase assembly

Products: NA

Alternate protein names: HAS; Cytochrome aa3-controlling protein

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MPHVEAITLTRDRRGPGLGAVRLWLYAVAALIIAMVVVGGATRLTESGLSITEWKPVTGALPPLSQADWQAEFDKYQAIP
QYEILNKGMGLEAFKRIYWWEWGHRLLGRLIGFAFLLPFLWFAWRGVLRGRLLAKCLVLFLLGGLQGAVGWWMVASGLTA
RVSVSQYRLAIHLTLACIILSAIVAVARSLSPEPRQVVGGRLRATAWALVALVLVQIFAGGLVAGLDAGMAFNTWPLMDG
HLIPPAAQLAAADPFWRNLFENALTVQFNHRMIAYALWTLTLLHALDARRAGGAVAQRAWVLFALVTAQASLGILTLIHQ
VPIDLALAHQFGATLVLVVATLHLGGLSGQVEPATPKLRLVKG

Sequences:

>Translated_363_residues
MPHVEAITLTRDRRGPGLGAVRLWLYAVAALIIAMVVVGGATRLTESGLSITEWKPVTGALPPLSQADWQAEFDKYQAIP
QYEILNKGMGLEAFKRIYWWEWGHRLLGRLIGFAFLLPFLWFAWRGVLRGRLLAKCLVLFLLGGLQGAVGWWMVASGLTA
RVSVSQYRLAIHLTLACIILSAIVAVARSLSPEPRQVVGGRLRATAWALVALVLVQIFAGGLVAGLDAGMAFNTWPLMDG
HLIPPAAQLAAADPFWRNLFENALTVQFNHRMIAYALWTLTLLHALDARRAGGAVAQRAWVLFALVTAQASLGILTLIHQ
VPIDLALAHQFGATLVLVVATLHLGGLSGQVEPATPKLRLVKG
>Mature_362_residues
PHVEAITLTRDRRGPGLGAVRLWLYAVAALIIAMVVVGGATRLTESGLSITEWKPVTGALPPLSQADWQAEFDKYQAIPQ
YEILNKGMGLEAFKRIYWWEWGHRLLGRLIGFAFLLPFLWFAWRGVLRGRLLAKCLVLFLLGGLQGAVGWWMVASGLTAR
VSVSQYRLAIHLTLACIILSAIVAVARSLSPEPRQVVGGRLRATAWALVALVLVQIFAGGLVAGLDAGMAFNTWPLMDGH
LIPPAAQLAAADPFWRNLFENALTVQFNHRMIAYALWTLTLLHALDARRAGGAVAQRAWVLFALVTAQASLGILTLIHQV
PIDLALAHQFGATLVLVVATLHLGGLSGQVEPATPKLRLVKG

Specific function: Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group

COG id: COG1612

COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX15/CtaA family. Type 2 subfamily

Homologues:

Organism=Homo sapiens, GI17921985, Length=336, Percent_Identity=39.8809523809524, Blast_Score=200, Evalue=1e-51,
Organism=Homo sapiens, GI17921987, Length=284, Percent_Identity=40.1408450704225, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17536069, Length=331, Percent_Identity=37.7643504531722, Blast_Score=194, Evalue=5e-50,
Organism=Saccharomyces cerevisiae, GI6320989, Length=378, Percent_Identity=39.4179894179894, Blast_Score=232, Evalue=9e-62,
Organism=Drosophila melanogaster, GI19922860, Length=356, Percent_Identity=37.9213483146067, Blast_Score=200, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CTAA_XANP2 (A7ING5)

Other databases:

- EMBL:   CP000781
- RefSeq:   YP_001419216.1
- STRING:   A7ING5
- GeneID:   5424370
- GenomeReviews:   CP000781_GR
- KEGG:   xau:Xaut_4338
- eggNOG:   COG1612
- HOGENOM:   HBG628966
- OMA:   GLSIVEW
- ProtClustDB:   CLSK2793705
- BioCyc:   XAUT78245:XAUT_4338-MONOMER
- HAMAP:   MF_01665
- InterPro:   IPR003780

Pfam domain/function: PF02628 COX15-CtaA

EC number: NA

Molecular weight: Translated: 39455; Mature: 39324

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: BINDING 329-329

Signals:

None

Transmembrane regions:

HASH(0x13b97ccc)-; HASH(0x153d3c78)-; HASH(0x153d869c)-; HASH(0x152d49a8)-; HASH(0x14e812d8)-; HASH(0x15126d50)-; HASH(0x150171c8)-; HASH(0x153d8684)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHVEAITLTRDRRGPGLGAVRLWLYAVAALIIAMVVVGGATRLTESGLSITEWKPVTGA
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEECCCCCCCC
LPPLSQADWQAEFDKYQAIPQYEILNKGMGLEAFKRIYWWEWGHRLLGRLIGFAFLLPFL
CCCCCCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFAWRGVLRGRLLAKCLVLFLLGGLQGAVGWWMVASGLTARVSVSQYRLAIHLTLACIIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHH
SAIVAVARSLSPEPRQVVGGRLRATAWALVALVLVQIFAGGLVAGLDAGMAFNTWPLMDG
HHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCC
HLIPPAAQLAAADPFWRNLFENALTVQFNHRMIAYALWTLTLLHALDARRAGGAVAQRAW
CCCCCHHHHHCCCHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VLFALVTAQASLGILTLIHQVPIDLALAHQFGATLVLVVATLHLGGLSGQVEPATPKLRL
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE
VKG
ECH
>Mature Secondary Structure 
PHVEAITLTRDRRGPGLGAVRLWLYAVAALIIAMVVVGGATRLTESGLSITEWKPVTGA
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEECCCCCCCC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ECH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA