| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is cbh [H]
Identifier: 154248254
GI number: 154248254
Start: 4806708
End: 4807733
Strand: Direct
Name: cbh [H]
Synonym: Xaut_4334
Alternate gene names: 154248254
Gene position: 4806708-4807733 (Clockwise)
Preceding gene: 154248253
Following gene: 154248256
Centisome position: 90.54
GC content: 60.14
Gene sequence:
>1026_bases ATGTGCACCCGTGTTGTCTATCTCGGGCCCAACGGAAATAACCTGACGGCCAGGTCCATGGACTGGAAAGACGACATCGG CACCAATCTGTGGATCTTCCCGCGGGGCATGGTGCGCGACGGCAAGGCTGGTCCGAACTCCCTGACCTGGACGTCCAGAT ACGGCAGCGTCATTGCGTCGGGCTACGACATCGCCACCACCGATGGCCTGAATGAAGCAGGATTGTCGGCCAACCTGCTG TGGCTGGTGGAATCGGAATATCCAGCCCTCGACAAGGCCAGGCCCGGGCTCTCCATCGCAGCCTGGGCGCAATATGTGCT CGACAGTTTCGCCACCGTGAAGGAGACCGTCGACGCCCTGAAGGATGAGCCGTTCATCCTTGTAACCGACGGCGTTCCGG GCGAAAAACGCCTTGCCACCCTGCATCTGTCCATTTCCGACAAGAGCGGCGACAGCGCGATCATCGAATATATCGGCGGC CGCCAGGTCATTCATCATGATCGCAGCTATCAGGTGATGACCAACTCCCCGGTCTTCGAAAAACAGCTCGCGCTGAACGA GTATTGGCAGCAGATCAGCGGCACCGTGATGTTGCCCGGAACCAACCGCGCGGCGGATCGCTTTGCCCGTGCTTCGTTCT ATGTGAATGCCATTCCGAAGGTGGAAGATCCCAAGGTTTCCCTTGCGGGGGTGTTCAGCGTGATCCGCAACGTGTCGGTG CCATTGGGCATTTCGACACCCAATGAGCCGAATATTTCCTCCACGCGCTGGCGCACCGTGGCCCACCACCACCAGAATCT CTATTTTTTCGAATCGGCGCTGGCGCCGAACATCTTCTGGATCGATCTCGCTCAGGTAGACTTCTCAGCGGAGACTGGAA CGGTCCGCAAGCTTGATCTGGGACCCAACCAGGGCAACATTTTTTCGGGCGAGGTGAGCAGCGCTTTCGCGCCAAGCGCG CCCTTTGCCTTCCTCGGACCCGGCGCCGGGCCGACGCCGCCTCAGCCCGAACCCTCGGGGCCATAG
Upstream 100 bases:
>100_bases TGAGGCTGCAGGAGCATTTTCGCGATACAGTCCGTCGCGAAAATGCTCCATGCTCCAGTTCGTTGCAGACCACGTCATCC CGAAAAACAGGAAAGCCTGG
Downstream 100 bases:
>100_bases ACTTCGCGGGTGAGATCCAGCCACGCGCGGGCGGCGTGGGACAGGTAGCTGCCCTGCCGCCAGACGATGGCCATCTGCCA TTCGGTGCCCGGCTCATCGA
Product: choloylglycine hydrolase
Products: NA
Alternate protein names: Bile salt hydrolase; Conjugated bile acid hydrolase; CBAH [H]
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MCTRVVYLGPNGNNLTARSMDWKDDIGTNLWIFPRGMVRDGKAGPNSLTWTSRYGSVIASGYDIATTDGLNEAGLSANLL WLVESEYPALDKARPGLSIAAWAQYVLDSFATVKETVDALKDEPFILVTDGVPGEKRLATLHLSISDKSGDSAIIEYIGG RQVIHHDRSYQVMTNSPVFEKQLALNEYWQQISGTVMLPGTNRAADRFARASFYVNAIPKVEDPKVSLAGVFSVIRNVSV PLGISTPNEPNISSTRWRTVAHHHQNLYFFESALAPNIFWIDLAQVDFSAETGTVRKLDLGPNQGNIFSGEVSSAFAPSA PFAFLGPGAGPTPPQPEPSGP
Sequences:
>Translated_341_residues MCTRVVYLGPNGNNLTARSMDWKDDIGTNLWIFPRGMVRDGKAGPNSLTWTSRYGSVIASGYDIATTDGLNEAGLSANLL WLVESEYPALDKARPGLSIAAWAQYVLDSFATVKETVDALKDEPFILVTDGVPGEKRLATLHLSISDKSGDSAIIEYIGG RQVIHHDRSYQVMTNSPVFEKQLALNEYWQQISGTVMLPGTNRAADRFARASFYVNAIPKVEDPKVSLAGVFSVIRNVSV PLGISTPNEPNISSTRWRTVAHHHQNLYFFESALAPNIFWIDLAQVDFSAETGTVRKLDLGPNQGNIFSGEVSSAFAPSA PFAFLGPGAGPTPPQPEPSGP >Mature_341_residues MCTRVVYLGPNGNNLTARSMDWKDDIGTNLWIFPRGMVRDGKAGPNSLTWTSRYGSVIASGYDIATTDGLNEAGLSANLL WLVESEYPALDKARPGLSIAAWAQYVLDSFATVKETVDALKDEPFILVTDGVPGEKRLATLHLSISDKSGDSAIIEYIGG RQVIHHDRSYQVMTNSPVFEKQLALNEYWQQISGTVMLPGTNRAADRFARASFYVNAIPKVEDPKVSLAGVFSVIRNVSV PLGISTPNEPNISSTRWRTVAHHHQNLYFFESALAPNIFWIDLAQVDFSAETGTVRKLDLGPNQGNIFSGEVSSAFAPSA PFAFLGPGAGPTPPQPEPSGP
Specific function: The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut [H]
COG id: COG3049
COG function: function code M; Penicillin V acylase and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C59 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003199 [H]
Pfam domain/function: PF02275 CBAH [H]
EC number: =3.5.1.24 [H]
Molecular weight: Translated: 37028; Mature: 37028
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTRVVYLGPNGNNLTARSMDWKDDIGTNLWIFPRGMVRDGKAGPNSLTWTSRYGSVIAS CCEEEEEECCCCCCEEEECCCCCHHCCCEEEEECCCCCCCCCCCCCCEEEEHHCCHHHCC GYDIATTDGLNEAGLSANLLWLVESEYPALDKARPGLSIAAWAQYVLDSFATVKETVDAL CCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KDEPFILVTDGVPGEKRLATLHLSISDKSGDSAIIEYIGGRQVIHHDRSYQVMTNSPVFE CCCCEEEEECCCCCCCEEEEEEEEEECCCCCHHHHHHCCCCEEEECCCCEEEEECCCCHH KQLALNEYWQQISGTVMLPGTNRAADRFARASFYVNAIPKVEDPKVSLAGVFSVIRNVSV HHHHHHHHHHHHCCEEEECCCCHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHCCC PLGISTPNEPNISSTRWRTVAHHHQNLYFFESALAPNIFWIDLAQVDFSAETGTVRKLDL CEECCCCCCCCCCCHHHHHHHHHCCCEEEEHHHCCCCEEEEEEEEEEECCCCCCEEEEEC GPNQGNIFSGEVSSAFAPSAPFAFLGPGAGPTPPQPEPSGP CCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MCTRVVYLGPNGNNLTARSMDWKDDIGTNLWIFPRGMVRDGKAGPNSLTWTSRYGSVIAS CCEEEEEECCCCCCEEEECCCCCHHCCCEEEEECCCCCCCCCCCCCCEEEEHHCCHHHCC GYDIATTDGLNEAGLSANLLWLVESEYPALDKARPGLSIAAWAQYVLDSFATVKETVDAL CCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KDEPFILVTDGVPGEKRLATLHLSISDKSGDSAIIEYIGGRQVIHHDRSYQVMTNSPVFE CCCCEEEEECCCCCCCEEEEEEEEEECCCCCHHHHHHCCCCEEEECCCCEEEEECCCCHH KQLALNEYWQQISGTVMLPGTNRAADRFARASFYVNAIPKVEDPKVSLAGVFSVIRNVSV HHHHHHHHHHHHCCEEEECCCCHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHCCC PLGISTPNEPNISSTRWRTVAHHHQNLYFFESALAPNIFWIDLAQVDFSAETGTVRKLDL CEECCCCCCCCCCCHHHHHHHHHCCCEEEEHHHCCCCEEEEEEEEEEECCCCCCEEEEEC GPNQGNIFSGEVSSAFAPSAPFAFLGPGAGPTPPQPEPSGP CCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7618863; 11792842 [H]