| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is tgt [H]
Identifier: 154248191
GI number: 154248191
Start: 4737590
End: 4738744
Strand: Direct
Name: tgt [H]
Synonym: Xaut_4271
Alternate gene names: 154248191
Gene position: 4737590-4738744 (Clockwise)
Preceding gene: 154248190
Following gene: 154248192
Centisome position: 89.24
GC content: 68.57
Gene sequence:
>1155_bases ATGACCGCCCACACTCCTGTCGACACCTTCTCCTTCACCCTGTCCGCCACCGACGGCGCCGCCCGCACCGGCTTCGTCTC GACCCCGCGCGGGGCCATCCGCACACCGGCCTTCATGCCGGTGGGCACGGCGGCCACCGTGAAGGGGCTCTATTTCGACC AGGTGAAGCAGACGGGCGCCGACATCGTCCTCGCCAACACCTACCACCTCATGCTGCGCCCTGGCGCCGAGCGGATCGCA AAGCTCGGCGGGCTGCACAGCTTCATGCGCTGGGACGGGCCGATCCTTACCGATTCCGGCGGCTTCCAGGTGATGAGCCT GTCGAGCCTGCGCAAGATGAGCGAGCAGGGCGTCACCTTCCGCTCCCATGTGGACGGCGCCTACTTCGAGATGAGCCCGG AGCGCTCGGTGGAGATCCAGGGACTGCTCGGCGCCGATATCCAGATGCAGCTGGACGAATGCGTGCGCCTGCCCTGCACC GATGAAGAGGCCGCGCGCGCCATGCGCCTGTCACTGCGCTGGGCCGAGCGCTCGAAGCGCGCGTTCGAGGCGCAGCCGAA GGGCCGGGCGCTGTTCGGCATCGTGCAGGGCGGGGCGGTGCCGGCGCTGCGGGTGGAATCGGCCCGCGCGCTGGCGGACA TGGACTTCCCCGGCTATTCCATCGGCGGCCTTGCGGTGGGCGAGCCGCAGGAGGTCATGCTCGCCATGATCGAGACGGTG GAGCCGCATCTGCCGGTCAACAAGCCGCGCTACCTGATGGGTGTGGGCACGCCGGACGACCTTCTGGAATCGGTGGCGCG CGGCATCGACATGTTCGACTGCGTGATGCCCACCCGCTCCGGCCGCCACGCTTTGGCCTTCACCCGCTTCGGCCGCATCA ACCTGAAGAACGCCCGCCACGCCGACGACCCCCGTCCGCTGGACGAGGAAAGCGACTGCCCGGCCCTGCGCGACTATTCC CGCGCCTACCTCCACCACCTCGTGCGCTGCGAGGAGATGCTAGGCTCCATGCTGCTCACCTGGGCCAATGTCCATTATTA CGAGCAGCTCATGGCCGGTGCCCGCGCCGCCATCGCCGAGGGGCGGTACGCCGATTATATGGCGCAGGTGAAGGACGGCT GGGCGCGGGGAGATATTCCCGTGTGGGCAGGGTAG
Upstream 100 bases:
>100_bases GGCACGAGGCTCAGAAGCGCGCCTATGCCCATGCCATCGCGGCCGGCTATCGCTTCTATTCCTATGGCGATGCGTGCCTG CTTCTGCCAGAAGGCGGGCC
Downstream 100 bases:
>100_bases GGATGTGCCCCGGACAAGCGACGGTGCAGCCGGAGCGCTGATCCGGGGAACCAAAGACTCCCGCCCAACCCCATTGAATA AACGGACAACCGTTTTATTC
Product: queuine tRNA-ribosyltransferase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MTAHTPVDTFSFTLSATDGAARTGFVSTPRGAIRTPAFMPVGTAATVKGLYFDQVKQTGADIVLANTYHLMLRPGAERIA KLGGLHSFMRWDGPILTDSGGFQVMSLSSLRKMSEQGVTFRSHVDGAYFEMSPERSVEIQGLLGADIQMQLDECVRLPCT DEEAARAMRLSLRWAERSKRAFEAQPKGRALFGIVQGGAVPALRVESARALADMDFPGYSIGGLAVGEPQEVMLAMIETV EPHLPVNKPRYLMGVGTPDDLLESVARGIDMFDCVMPTRSGRHALAFTRFGRINLKNARHADDPRPLDEESDCPALRDYS RAYLHHLVRCEEMLGSMLLTWANVHYYEQLMAGARAAIAEGRYADYMAQVKDGWARGDIPVWAG
Sequences:
>Translated_384_residues MTAHTPVDTFSFTLSATDGAARTGFVSTPRGAIRTPAFMPVGTAATVKGLYFDQVKQTGADIVLANTYHLMLRPGAERIA KLGGLHSFMRWDGPILTDSGGFQVMSLSSLRKMSEQGVTFRSHVDGAYFEMSPERSVEIQGLLGADIQMQLDECVRLPCT DEEAARAMRLSLRWAERSKRAFEAQPKGRALFGIVQGGAVPALRVESARALADMDFPGYSIGGLAVGEPQEVMLAMIETV EPHLPVNKPRYLMGVGTPDDLLESVARGIDMFDCVMPTRSGRHALAFTRFGRINLKNARHADDPRPLDEESDCPALRDYS RAYLHHLVRCEEMLGSMLLTWANVHYYEQLMAGARAAIAEGRYADYMAQVKDGWARGDIPVWAG >Mature_383_residues TAHTPVDTFSFTLSATDGAARTGFVSTPRGAIRTPAFMPVGTAATVKGLYFDQVKQTGADIVLANTYHLMLRPGAERIAK LGGLHSFMRWDGPILTDSGGFQVMSLSSLRKMSEQGVTFRSHVDGAYFEMSPERSVEIQGLLGADIQMQLDECVRLPCTD EEAARAMRLSLRWAERSKRAFEAQPKGRALFGIVQGGAVPALRVESARALADMDFPGYSIGGLAVGEPQEVMLAMIETVE PHLPVNKPRYLMGVGTPDDLLESVARGIDMFDCVMPTRSGRHALAFTRFGRINLKNARHADDPRPLDEESDCPALRDYSR AYLHHLVRCEEMLGSMLLTWANVHYYEQLMAGARAAIAEGRYADYMAQVKDGWARGDIPVWAG
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=368, Percent_Identity=44.2934782608696, Blast_Score=295, Evalue=6e-80, Organism=Escherichia coli, GI1786607, Length=358, Percent_Identity=52.5139664804469, Blast_Score=385, Evalue=1e-108, Organism=Caenorhabditis elegans, GI17544680, Length=359, Percent_Identity=40.3899721448468, Blast_Score=262, Evalue=3e-70, Organism=Drosophila melanogaster, GI19920510, Length=384, Percent_Identity=41.6666666666667, Blast_Score=298, Evalue=5e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 42190; Mature: 42059
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAHTPVDTFSFTLSATDGAARTGFVSTPRGAIRTPAFMPVGTAATVKGLYFDQVKQTGA CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC DIVLANTYHLMLRPGAERIAKLGGLHSFMRWDGPILTDSGGFQVMSLSSLRKMSEQGVTF CEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEHHHHHHHHHCCCEE RSHVDGAYFEMSPERSVEIQGLLGADIQMQLDECVRLPCTDEEAARAMRLSLRWAERSKR ECCCCCEEEEECCCCCEEEEEEECCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH AFEAQPKGRALFGIVQGGAVPALRVESARALADMDFPGYSIGGLAVGEPQEVMLAMIETV HHCCCCCCCEEEEEECCCCCCEEEEHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHC EPHLPVNKPRYLMGVGTPDDLLESVARGIDMFDCVMPTRSGRHALAFTRFGRINLKNARH CCCCCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEEEECCEEECCCCC ADDPRPLDEESDCPALRDYSRAYLHHLVRCEEMLGSMLLTWANVHYYEQLMAGARAAIAE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRYADYMAQVKDGWARGDIPVWAG CHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TAHTPVDTFSFTLSATDGAARTGFVSTPRGAIRTPAFMPVGTAATVKGLYFDQVKQTGA CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC DIVLANTYHLMLRPGAERIAKLGGLHSFMRWDGPILTDSGGFQVMSLSSLRKMSEQGVTF CEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEHHHHHHHHHCCCEE RSHVDGAYFEMSPERSVEIQGLLGADIQMQLDECVRLPCTDEEAARAMRLSLRWAERSKR ECCCCCEEEEECCCCCEEEEEEECCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH AFEAQPKGRALFGIVQGGAVPALRVESARALADMDFPGYSIGGLAVGEPQEVMLAMIETV HHCCCCCCCEEEEEECCCCCCEEEEHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHC EPHLPVNKPRYLMGVGTPDDLLESVARGIDMFDCVMPTRSGRHALAFTRFGRINLKNARH CCCCCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEEEECCEEECCCCC ADDPRPLDEESDCPALRDYSRAYLHHLVRCEEMLGSMLLTWANVHYYEQLMAGARAAIAE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRYADYMAQVKDGWARGDIPVWAG CHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]