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The map label for this gene is ctb [H]

Identifier: 154248152

GI number: 154248152

Start: 4694017

End: 4694565

Strand: Reverse

Name: ctb [H]

Synonym: Xaut_4232

Alternate gene names: 154248152

Gene position: 4694565-4694017 (Counterclockwise)

Preceding gene: 154248159

Following gene: 154248151

Centisome position: 88.43

GC content: 66.85

Gene sequence:

>549_bases
ATGAACGCTTCGCTCCCCCCGGCCGCCGCCGGTCCCACCCCATCAACCCTCGACGAGGACGCGGTGCGCCGGCTCGTCCA
TCTGTTCTATGAGCGGGTGAACAAGGATGCGGTGCTCGGCCCGATTTTCTCCGGCCGCATCAAGGACGATGCCTGGCCAG
TCCACCTCGCCAAGATGTGCGATTTCTGGTCCTCCGTGCTGCTGAAGTCCGGACGCTACGAAGGCCGCCCCCTGCCACCG
CACCTGGCGCTGGGATCGGACGCCGGCGACGCGCAGTTCGCCCGCTGGCTCGCCCTGTTCCGCCCCACGGCGCTGGAGGT
GCTGCCGCCGGATGCGGCGCAGGCAGCCATCGCCCATGCCGAACGCATGGCCCATTCGTTCCGCCTCGCCATCGGCTTCC
CAATGGCGAGGACATCACGCGGATGCCGCTGGTCCGGTAGGATTCGGACCGGATCTCCCTTTGACATAGAGCACCGTCTA
CCACCCACCCGGACCTTCCCGCCGGTCGGCGCCGCAGACTTTAAAACCGCGACAGAATCCGGAATTTGA

Upstream 100 bases:

>100_bases
CACCCCCGGCGCGTTGCCGGTGGCTGCAGCCACGATACGGTAGCCACGAGATGGCAACCAGTTGATGGCGGCGTAGAGGA
CGCAGGAAGAGACCCGCACG

Downstream 100 bases:

>100_bases
GCCCTCTTGCACGTTCGCTCGGCGTCGCGCGCACCCTTTGGCGCGCCCGCACACCGGGGCAAGACAGGTGAGCCCCTCGA
CCCGCCGGATGCCGCAGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Cj-trHbP; Truncated Hb [H]

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MNASLPPAAAGPTPSTLDEDAVRRLVHLFYERVNKDAVLGPIFSGRIKDDAWPVHLAKMCDFWSSVLLKSGRYEGRPLPP
HLALGSDAGDAQFARWLALFRPTALEVLPPDAAQAAIAHAERMAHSFRLAIGFPMARTSRGCRWSGRIRTGSPFDIEHRL
PPTRTFPPVGAADFKTATESGI

Sequences:

>Translated_182_residues
MNASLPPAAAGPTPSTLDEDAVRRLVHLFYERVNKDAVLGPIFSGRIKDDAWPVHLAKMCDFWSSVLLKSGRYEGRPLPP
HLALGSDAGDAQFARWLALFRPTALEVLPPDAAQAAIAHAERMAHSFRLAIGFPMARTSRGCRWSGRIRTGSPFDIEHRL
PPTRTFPPVGAADFKTATESGI
>Mature_182_residues
MNASLPPAAAGPTPSTLDEDAVRRLVHLFYERVNKDAVLGPIFSGRIKDDAWPVHLAKMCDFWSSVLLKSGRYEGRPLPP
HLALGSDAGDAQFARWLALFRPTALEVLPPDAAQAAIAHAERMAHSFRLAIGFPMARTSRGCRWSGRIRTGSPFDIEHRL
PPTRTFPPVGAADFKTATESGI

Specific function: Has been suggested to be involved in cytochrome c peroxidase or P450-like oxygen chemistry or cyanide detoxification. The high oxygen affinity of this protein suggests that it probably does not function as an oxygen transporter [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group III subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 19867; Mature: 19867

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASLPPAAAGPTPSTLDEDAVRRLVHLFYERVNKDAVLGPIFSGRIKDDAWPVHLAKMC
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHH
DFWSSVLLKSGRYEGRPLPPHLALGSDAGDAQFARWLALFRPTALEVLPPDAAQAAIAHA
HHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCHHEECCCHHHHHHHHHH
ERMAHSFRLAIGFPMARTSRGCRWSGRIRTGSPFDIEHRLPPTRTFPPVGAADFKTATES
HHHHHHHHHHHCCCHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHCC
GI
CC
>Mature Secondary Structure
MNASLPPAAAGPTPSTLDEDAVRRLVHLFYERVNKDAVLGPIFSGRIKDDAWPVHLAKMC
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHH
DFWSSVLLKSGRYEGRPLPPHLALGSDAGDAQFARWLALFRPTALEVLPPDAAQAAIAHA
HHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCHHEECCCHHHHHHHHHH
ERMAHSFRLAIGFPMARTSRGCRWSGRIRTGSPFDIEHRLPPTRTFPPVGAADFKTATES
HHHHHHHHHHHCCCHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHCC
GI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]