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The map label for this gene is yibD [C]

Identifier: 154248151

GI number: 154248151

Start: 4692697

End: 4693779

Strand: Reverse

Name: yibD [C]

Synonym: Xaut_4231

Alternate gene names: 154248151

Gene position: 4693779-4692697 (Counterclockwise)

Preceding gene: 154248152

Following gene: 154248150

Centisome position: 88.41

GC content: 63.25

Gene sequence:

>1083_bases
TTGCGAAGCGATGCAGTCACCGTTGCGGCGGTCATTCCACTTTTCAACGGCGCATCTTTCATCCGGGAAGCGCTGGACAG
CGTCTTGAGCCAGACCGAGCCGGCGGACGAGATCATCGTGGTGGACGATGGCTCCACCGACGATGGTCCGGCCATCGTCG
CGGAGATGGCGCTTCATCACCCCATCACCCTGCTGCGCAAGCCCAATGGCGGCCAGTCGTCGGCCCGCAACCTCGCCATC
CAGCACACGGCGTGCAGCCACGTGGCCTTCCTCGACCAGGACGATGCCTGGTACGAGGAGCACTTGGAAATACTCAAGCG
GCCGTTCATGCAGGGCCACACGCGCCGGCTCGGCCTGGTCTATGGCAATCTCGATCAGATCGACCGCAAGGGACGGCTGA
TCCAGCAATGCTGCCTGGATGATATCCTGTCGCCCCAGCCCAAGCGGTCGCTGCGCGACTGCCTGCGGCACGACATGTTC
ATCCTCCCCGGTGCAGCGCTGGTATCGAAGCAGGCCATGATCGACGCCAGCCTGTTCGACGAGCGACTGTCGGGCTACGA
GGACGACGACCTGTTCGTGCGCATGTTCGCGCTCGGCTTCTGCATGGTCTATCTCGATGTCGCCGTGACGCGCTGGCGCA
TCTATGATGGCTCCACCTCCTACAGTCCGCGCATGACGCGCTCGTGCATGATCTATTTCCACAAGCTGGTGGAGATGTTC
CCGGACGAGCCGCGCGTCGGCTTCCTTCACGCCCAAAATGCCATTGGCCCGCGCTTCATGGACGTGCTCACCACCGAGTT
CATCGCGGCCTCAAAGACCAGGGACAACGAGCGCCTGCGACAGGCCTGGAGTGATATTCAGGAGGTGATCCCGGTCATGG
CGCCCAAGGTCCGCCGTCGGATGCGGCTGGTTCGCCCGATCATCGCAGCGACAGCCTTCGGTCCCGTCCGTTCGCTTGCC
AGACGGGCGGTGCGCTACGTGGCACGCGACGTGCTGAAAGACACGCGGGAGCTGCGGAAGATGCGTAAATGGTCCGGGGA
CAAGCTCAAGGCTCTGCTTGCGCCCGCCGCGGTAACACCTTAA

Upstream 100 bases:

>100_bases
AAATTCGTCGCGCCCTTTGGCCGCAATCCCCTGATATTACCTAGATACCGCTCATCAGGAAAATGAGTGATGATTTGCAG
GGTGTTGTGAGGGGAGCGAA

Downstream 100 bases:

>100_bases
GAACGCGCCTTCGTGAGGCCACGTGGCGGAGTGGTTACGCAGCGGACTGCAAATCCGTGCACCCCGGTTCGATTCCGGGC
GTGGCCTCCACTCCCCGCGA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MRSDAVTVAAVIPLFNGASFIREALDSVLSQTEPADEIIVVDDGSTDDGPAIVAEMALHHPITLLRKPNGGQSSARNLAI
QHTACSHVAFLDQDDAWYEEHLEILKRPFMQGHTRRLGLVYGNLDQIDRKGRLIQQCCLDDILSPQPKRSLRDCLRHDMF
ILPGAALVSKQAMIDASLFDERLSGYEDDDLFVRMFALGFCMVYLDVAVTRWRIYDGSTSYSPRMTRSCMIYFHKLVEMF
PDEPRVGFLHAQNAIGPRFMDVLTTEFIAASKTRDNERLRQAWSDIQEVIPVMAPKVRRRMRLVRPIIAATAFGPVRSLA
RRAVRYVARDVLKDTRELRKMRKWSGDKLKALLAPAAVTP

Sequences:

>Translated_360_residues
MRSDAVTVAAVIPLFNGASFIREALDSVLSQTEPADEIIVVDDGSTDDGPAIVAEMALHHPITLLRKPNGGQSSARNLAI
QHTACSHVAFLDQDDAWYEEHLEILKRPFMQGHTRRLGLVYGNLDQIDRKGRLIQQCCLDDILSPQPKRSLRDCLRHDMF
ILPGAALVSKQAMIDASLFDERLSGYEDDDLFVRMFALGFCMVYLDVAVTRWRIYDGSTSYSPRMTRSCMIYFHKLVEMF
PDEPRVGFLHAQNAIGPRFMDVLTTEFIAASKTRDNERLRQAWSDIQEVIPVMAPKVRRRMRLVRPIIAATAFGPVRSLA
RRAVRYVARDVLKDTRELRKMRKWSGDKLKALLAPAAVTP
>Mature_360_residues
MRSDAVTVAAVIPLFNGASFIREALDSVLSQTEPADEIIVVDDGSTDDGPAIVAEMALHHPITLLRKPNGGQSSARNLAI
QHTACSHVAFLDQDDAWYEEHLEILKRPFMQGHTRRLGLVYGNLDQIDRKGRLIQQCCLDDILSPQPKRSLRDCLRHDMF
ILPGAALVSKQAMIDASLFDERLSGYEDDDLFVRMFALGFCMVYLDVAVTRWRIYDGSTSYSPRMTRSCMIYFHKLVEMF
PDEPRVGFLHAQNAIGPRFMDVLTTEFIAASKTRDNERLRQAWSDIQEVIPVMAPKVRRRMRLVRPIIAATAFGPVRSLA
RRAVRYVARDVLKDTRELRKMRKWSGDKLKALLAPAAVTP

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=106, Percent_Identity=36.7924528301887, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 40742; Mature: 40742

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSDAVTVAAVIPLFNGASFIREALDSVLSQTEPADEIIVVDDGSTDDGPAIVAEMALHH
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHC
PITLLRKPNGGQSSARNLAIQHTACSHVAFLDQDDAWYEEHLEILKRPFMQGHTRRLGLV
CHHEEECCCCCCCHHHHEEHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEE
YGNLDQIDRKGRLIQQCCLDDILSPQPKRSLRDCLRHDMFILPGAALVSKQAMIDASLFD
ECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHH
ERLSGYEDDDLFVRMFALGFCMVYLDVAVTRWRIYDGSTSYSPRMTRSCMIYFHKLVEMF
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHC
PDEPRVGFLHAQNAIGPRFMDVLTTEFIAASKTRDNERLRQAWSDIQEVIPVMAPKVRRR
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHH
MRLVRPIIAATAFGPVRSLARRAVRYVARDVLKDTRELRKMRKWSGDKLKALLAPAAVTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MRSDAVTVAAVIPLFNGASFIREALDSVLSQTEPADEIIVVDDGSTDDGPAIVAEMALHH
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHC
PITLLRKPNGGQSSARNLAIQHTACSHVAFLDQDDAWYEEHLEILKRPFMQGHTRRLGLV
CHHEEECCCCCCCHHHHEEHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEE
YGNLDQIDRKGRLIQQCCLDDILSPQPKRSLRDCLRHDMFILPGAALVSKQAMIDASLFD
ECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHH
ERLSGYEDDDLFVRMFALGFCMVYLDVAVTRWRIYDGSTSYSPRMTRSCMIYFHKLVEMF
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHC
PDEPRVGFLHAQNAIGPRFMDVLTTEFIAASKTRDNERLRQAWSDIQEVIPVMAPKVRRR
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHH
MRLVRPIIAATAFGPVRSLARRAVRYVARDVLKDTRELRKMRKWSGDKLKALLAPAAVTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA