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The map label for this gene is ycgM [C]

Identifier: 154248027

GI number: 154248027

Start: 4542733

End: 4543581

Strand: Reverse

Name: ycgM [C]

Synonym: Xaut_4106

Alternate gene names: 154248027

Gene position: 4543581-4542733 (Counterclockwise)

Preceding gene: 154248033

Following gene: 154248023

Centisome position: 85.58

GC content: 65.49

Gene sequence:

>849_bases
ATGAAGCTGGTCCGCTTCGGGGAAAAAGGGCAGGAAAAGCCGGGTCTAATCGATTCAACCGGTAAGGTGCGCGACCTGTC
CTCGGTCATCCCCGACCTCGCCGGCGAGGCGCTCTCGCCCGCCAGCCTCACCAAGATCGCGGCGGTCGATCCGACCTCCC
TGCCGCTCGCTCCCGAGGGCGTACGCCTCGGCTCCTGCGTGGCACGACCGGGTAATTTTGTCGCCGTGGGCCTCAATTTC
GCGGACCATGCCGCCGAGACCAACAATCCCATCCCGGACGAGCCGGTGCTGTTCAACAAGGCGCCGAACTGCGTTGTCGG
TCCGGATGACGACGTGATGATCCCCAAGGGCTCGCTGAAGCTCGACTGGGAAGTGGAGCTGGCCTTCGTCATCGGCACCC
GCGCCCGCTATGTGGAGGAGAAGGACGCCCTCGACCACGTGGCCGGCTATTTCATCTGCAACGACGTGTCCGAGCGCCAT
TTCCAGATCGAGCGCGGCGGCCAGTGGGCCAAGGGCAAGGGCAGCGAGACCTTCGGACCGCTCGGCCCCTGGCTGGTGAC
CAAGGACGAGATCCCCGACACCTCGGATCTCGCCATGTGGCTCGAGGTCAACGGCGAGAAGGTGCAGAACGGCTCGACGA
AGACCATGATCTTCCGCATCCCGTTCCTGGTGCACTACATCAGCCAGTTCATGGTGCTGGAGCCCGGCGACGTGATCACC
ACCGGAACCCCGCCCGGCGTCGGCCTCGGCTTCAAGCCGCCGCGTTTCCTGAAGGCAGGCGACGTGATGCGCGTCGGCAT
CGCCGGCCTCGGCGTGCAGCAGCAGACCGTGGTCCCGTTCCAGCTGTGA

Upstream 100 bases:

>100_bases
CATTGACCAATGCCCCCGTCCGCGCCAGCGTGCGCGCCCGGCGAGCGACCGCGCGCCGCACGCGCTTGACATCCAATGAT
ACCACTAGGGAGTTCCACCG

Downstream 100 bases:

>100_bases
GGTTTCGGGCCGGGGATGATCGTTCCCGGCCCCCCTCACTGCAGCGTGGCGTTGGCCAGCCAGGTCTTCACCGCGTCGAG
GGCCTCGCCGCGCTTGCCAG

Product: 5-carboxymethyl-2-hydroxymuconate delta-isomerase

Products: NA

Alternate protein names: UGL; Ureidoglycolase; Ureidoglycolatase; Ureidoglycolate hydrolase [H]

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKLVRFGEKGQEKPGLIDSTGKVRDLSSVIPDLAGEALSPASLTKIAAVDPTSLPLAPEGVRLGSCVARPGNFVAVGLNF
ADHAAETNNPIPDEPVLFNKAPNCVVGPDDDVMIPKGSLKLDWEVELAFVIGTRARYVEEKDALDHVAGYFICNDVSERH
FQIERGGQWAKGKGSETFGPLGPWLVTKDEIPDTSDLAMWLEVNGEKVQNGSTKTMIFRIPFLVHYISQFMVLEPGDVIT
TGTPPGVGLGFKPPRFLKAGDVMRVGIAGLGVQQQTVVPFQL

Sequences:

>Translated_282_residues
MKLVRFGEKGQEKPGLIDSTGKVRDLSSVIPDLAGEALSPASLTKIAAVDPTSLPLAPEGVRLGSCVARPGNFVAVGLNF
ADHAAETNNPIPDEPVLFNKAPNCVVGPDDDVMIPKGSLKLDWEVELAFVIGTRARYVEEKDALDHVAGYFICNDVSERH
FQIERGGQWAKGKGSETFGPLGPWLVTKDEIPDTSDLAMWLEVNGEKVQNGSTKTMIFRIPFLVHYISQFMVLEPGDVIT
TGTPPGVGLGFKPPRFLKAGDVMRVGIAGLGVQQQTVVPFQL
>Mature_282_residues
MKLVRFGEKGQEKPGLIDSTGKVRDLSSVIPDLAGEALSPASLTKIAAVDPTSLPLAPEGVRLGSCVARPGNFVAVGLNF
ADHAAETNNPIPDEPVLFNKAPNCVVGPDDDVMIPKGSLKLDWEVELAFVIGTRARYVEEKDALDHVAGYFICNDVSERH
FQIERGGQWAKGKGSETFGPLGPWLVTKDEIPDTSDLAMWLEVNGEKVQNGSTKTMIFRIPFLVHYISQFMVLEPGDVIT
TGTPPGVGLGFKPPRFLKAGDVMRVGIAGLGVQQQTVVPFQL

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI156231349, Length=292, Percent_Identity=43.1506849315069, Blast_Score=217, Evalue=1e-56,
Organism=Homo sapiens, GI40786394, Length=292, Percent_Identity=42.1232876712329, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI215422413, Length=215, Percent_Identity=39.0697674418605, Blast_Score=146, Evalue=2e-35,
Organism=Homo sapiens, GI66348062, Length=203, Percent_Identity=40.3940886699507, Blast_Score=144, Evalue=8e-35,
Organism=Homo sapiens, GI13654274, Length=203, Percent_Identity=40.3940886699507, Blast_Score=143, Evalue=2e-34,
Organism=Escherichia coli, GI1787428, Length=199, Percent_Identity=35.1758793969849, Blast_Score=110, Evalue=8e-26,
Organism=Caenorhabditis elegans, GI17557057, Length=198, Percent_Identity=37.3737373737374, Blast_Score=130, Evalue=6e-31,
Organism=Saccharomyces cerevisiae, GI6324161, Length=211, Percent_Identity=28.436018957346, Blast_Score=86, Evalue=7e-18,
Organism=Drosophila melanogaster, GI28572127, Length=283, Percent_Identity=39.9293286219081, Blast_Score=196, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24663695, Length=241, Percent_Identity=34.8547717842324, Blast_Score=151, Evalue=6e-37,
Organism=Drosophila melanogaster, GI28571789, Length=221, Percent_Identity=33.4841628959276, Blast_Score=126, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: =4.3.2.3 [H]

Molecular weight: Translated: 30376; Mature: 30376

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVRFGEKGQEKPGLIDSTGKVRDLSSVIPDLAGEALSPASLTKIAAVDPTSLPLAPEG
CCEEECCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCHHEEEEEECCCCCCCCCCC
VRLGSCVARPGNFVAVGLNFADHAAETNNPIPDEPVLFNKAPNCVVGPDDDVMIPKGSLK
CEECCEECCCCCEEEEECCCHHHHHHCCCCCCCCCEEECCCCCEEECCCCCEEECCCCEE
LDWEVELAFVIGTRARYVEEKDALDHVAGYFICNDVSERHFQIERGGQWAKGKGSETFGP
EEEEEEEEEEECCHHHHHHHHHHHHHHHHEEEECCCCCCEEEEECCCCCCCCCCCCCCCC
LGPWLVTKDEIPDTSDLAMWLEVNGEKVQNGSTKTMIFRIPFLVHYISQFMVLEPGDVIT
CCCEEEECCCCCCCCCEEEEEEECCEEECCCCCEEEEEEHHHHHHHHHHHEEECCCCEEE
TGTPPGVGLGFKPPRFLKAGDVMRVGIAGLGVQQQTVVPFQL
CCCCCCCCCCCCCCCCCCCCCEEEEEHCCCCCCCCEECCCCC
>Mature Secondary Structure
MKLVRFGEKGQEKPGLIDSTGKVRDLSSVIPDLAGEALSPASLTKIAAVDPTSLPLAPEG
CCEEECCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCHHEEEEEECCCCCCCCCCC
VRLGSCVARPGNFVAVGLNFADHAAETNNPIPDEPVLFNKAPNCVVGPDDDVMIPKGSLK
CEECCEECCCCCEEEEECCCHHHHHHCCCCCCCCCEEECCCCCEEECCCCCEEECCCCEE
LDWEVELAFVIGTRARYVEEKDALDHVAGYFICNDVSERHFQIERGGQWAKGKGSETFGP
EEEEEEEEEEECCHHHHHHHHHHHHHHHHEEEECCCCCCEEEEECCCCCCCCCCCCCCCC
LGPWLVTKDEIPDTSDLAMWLEVNGEKVQNGSTKTMIFRIPFLVHYISQFMVLEPGDVIT
CCCEEEECCCCCCCCCEEEEEEECCEEECCCCCEEEEEEHHHHHHHHHHHEEECCCCEEE
TGTPPGVGLGFKPPRFLKAGDVMRVGIAGLGVQQQTVVPFQL
CCCCCCCCCCCCCCCCCCCCCEEEEEHCCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA