| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247993
Identifier: 154247993
GI number: 154247993
Start: 4505873
End: 4506847
Strand: Reverse
Name: 154247993
Synonym: Xaut_4072
Alternate gene names: NA
Gene position: 4506847-4505873 (Counterclockwise)
Preceding gene: 154247994
Following gene: 154247992
Centisome position: 84.89
GC content: 70.56
Gene sequence:
>975_bases ATGGCCCTGCCCGCCGCGTTCCGCGATCTTGCCATCCCGGCCATCGCCTCGCCCATGTTCCTCGCCTCCGGCCCCGATCT GGTGGTGGAGGTGTGCCGCAGCGGGCTGGTGGGCACCTTCCCGGCCCTCAATGCGCGCACCAGCGATGCCTATGCGGCCT GGCTCGGCGAGATTGAGGACCGGCTTGCCGCGGCGGCGCAGGCCGGCCCGCGCCCGGCGCCCTATGGGGTGAACCTCATC GTCCACAAGTCCAACCCGCGCCTGGCCGCCGACATCGAGCTGACGGTGAAGCACAAGGTGCCCCTCGTCATCACCTCCCT CGGCGCGGTGCGCGAGGTGGTGGATGCGGTGCACAGCTATGGCGGCGCCATCTTCCACGACGTGGTCAACATGCGCCATG CCCGCAAGGCGGCGGAAGCCGGCGTGGACGGCATCATCGCCGTGTGCGCGGGGGCCGGCGGACATGCAGGCACATTGAGC CCGTTCGCCCTCATCCCCGAGATCGCCAGCTTCTTCACCGGCACCATCGTTTTGTCCGGGGCCATGAGCACCGGCCGCCA CATCGCCGCTGCCCGCATGCTCGGCGCCGACATGGCGTATCTCGGCACCCGCTTCCTCGCCACGCGGGAATGCATGGTGC CCGACGCGCAGAAGGAGATGGTGGTGGCGGCGAATGCCGACGACATCGTCTACACTCCCAAGGTCAGCGGCGTGCCGGCG AATTTCCTGCGCCAGAGCCTTGCCGCCGCGGGCATCGACCTTGACCAGCCGAAGCACGAGGGCGGGCTGGACATGGCCAG CGAGGCCAAGGCCTGGAAGACCGTGTGGTCGGCCGGACAGGGCGTCGGCTCGGTGCGCGAGGTGCTGCCCGCGGCCGAGC TGTGCCGCCAGCTCATCGCCGAATATCACGCCGCCCGCCGCGAGACCGCGCAGGAGGAGGCCGCCTCCTCCACCGCCTTC ACGCCCGCCGCCTGA
Upstream 100 bases:
>100_bases CCCGGCAGACCGCCGATTTTCTCATCCAGGGCCTTGCGCCCCGCACCTCAGAACGACGCCAGCCCAAGCGCTGAGCCTCG CCCCCAACGGAGGACACCCC
Downstream 100 bases:
>100_bases CAGGGCTCGAAGCCCCCTCTTCCACCTGCGGGTGCGGGGCAGCGCATTCAACCCCCACGCACCGTCGCCGTCCGGCTTGA CCGGACGGCCCATGGCCCGG
Product: 2-nitropropane dioxygenase NPD
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MALPAAFRDLAIPAIASPMFLASGPDLVVEVCRSGLVGTFPALNARTSDAYAAWLGEIEDRLAAAAQAGPRPAPYGVNLI VHKSNPRLAADIELTVKHKVPLVITSLGAVREVVDAVHSYGGAIFHDVVNMRHARKAAEAGVDGIIAVCAGAGGHAGTLS PFALIPEIASFFTGTIVLSGAMSTGRHIAAARMLGADMAYLGTRFLATRECMVPDAQKEMVVAANADDIVYTPKVSGVPA NFLRQSLAAAGIDLDQPKHEGGLDMASEAKAWKTVWSAGQGVGSVREVLPAAELCRQLIAEYHAARRETAQEEAASSTAF TPAA
Sequences:
>Translated_324_residues MALPAAFRDLAIPAIASPMFLASGPDLVVEVCRSGLVGTFPALNARTSDAYAAWLGEIEDRLAAAAQAGPRPAPYGVNLI VHKSNPRLAADIELTVKHKVPLVITSLGAVREVVDAVHSYGGAIFHDVVNMRHARKAAEAGVDGIIAVCAGAGGHAGTLS PFALIPEIASFFTGTIVLSGAMSTGRHIAAARMLGADMAYLGTRFLATRECMVPDAQKEMVVAANADDIVYTPKVSGVPA NFLRQSLAAAGIDLDQPKHEGGLDMASEAKAWKTVWSAGQGVGSVREVLPAAELCRQLIAEYHAARRETAQEEAASSTAF TPAA >Mature_323_residues ALPAAFRDLAIPAIASPMFLASGPDLVVEVCRSGLVGTFPALNARTSDAYAAWLGEIEDRLAAAAQAGPRPAPYGVNLIV HKSNPRLAADIELTVKHKVPLVITSLGAVREVVDAVHSYGGAIFHDVVNMRHARKAAEAGVDGIIAVCAGAGGHAGTLSP FALIPEIASFFTGTIVLSGAMSTGRHIAAARMLGADMAYLGTRFLATRECMVPDAQKEMVVAANADDIVYTPKVSGVPAN FLRQSLAAAGIDLDQPKHEGGLDMASEAKAWKTVWSAGQGVGSVREVLPAAELCRQLIAEYHAARRETAQEEAASSTAFT PAA
Specific function: Catalyzes the oxidative denitrification of nitronates to their corresponding aldehydes and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 33702; Mature: 33571
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPAAFRDLAIPAIASPMFLASGPDLVVEVCRSGLVGTFPALNARTSDAYAAWLGEIED CCCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH RLAAAAQAGPRPAPYGVNLIVHKSNPRLAADIELTVKHKVPLVITSLGAVREVVDAVHSY HHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH GGAIFHDVVNMRHARKAAEAGVDGIIAVCAGAGGHAGTLSPFALIPEIASFFTGTIVLSG CCHHHHHHHHHHHHHHHHHHCCCCEEHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEEC AMSTGRHIAAARMLGADMAYLGTRFLATRECMVPDAQKEMVVAANADDIVYTPKVSGVPA CHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCCCCCCH NFLRQSLAAAGIDLDQPKHEGGLDMASEAKAWKTVWSAGQGVGSVREVLPAAELCRQLIA HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH EYHAARRETAQEEAASSTAFTPAA HHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ALPAAFRDLAIPAIASPMFLASGPDLVVEVCRSGLVGTFPALNARTSDAYAAWLGEIED CCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH RLAAAAQAGPRPAPYGVNLIVHKSNPRLAADIELTVKHKVPLVITSLGAVREVVDAVHSY HHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH GGAIFHDVVNMRHARKAAEAGVDGIIAVCAGAGGHAGTLSPFALIPEIASFFTGTIVLSG CCHHHHHHHHHHHHHHHHHHCCCCEEHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEEC AMSTGRHIAAARMLGADMAYLGTRFLATRECMVPDAQKEMVVAANADDIVYTPKVSGVPA CHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCCCCCCH NFLRQSLAAAGIDLDQPKHEGGLDMASEAKAWKTVWSAGQGVGSVREVLPAAELCRQLIA HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH EYHAARRETAQEEAASSTAFTPAA HHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]