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The map label for this gene is 154247929

Identifier: 154247929

GI number: 154247929

Start: 4436904

End: 4438643

Strand: Reverse

Name: 154247929

Synonym: Xaut_4008

Alternate gene names: NA

Gene position: 4438643-4436904 (Counterclockwise)

Preceding gene: 154247930

Following gene: 154247928

Centisome position: 83.61

GC content: 69.31

Gene sequence:

>1740_bases
ATGGCCGATGAGCACGAGTTTCGCGTCCGGCCCGGCCGCATCCGCTCGTCCCGTGCCCAGAGGTCCCGTCCCTTCATCGC
CCAGGCCCTCGCCGCGGCCCAGAAGGCTGGCGGGCACGTCTCCCGATCCGGCCGCATCTCGCCCGGCGCGCGCTCGCATT
TCGGCCGTGGCCGGACGGCAAGCATCGTCGCCAACCGACTGCTCACTGGGCTCTCGCGCATCGTGGTGATCAAGACCCGC
GTGGTCCGGCACACGGCGCGGGCTACGCCCCTCTCGGCTCACCTCAGCTATCTGCACCGGGAGGGTGTGACCCGGGATGG
AGAGAAGGCCCGCCTGTTCGGGCCGGGCGCCGAGGAGGGGGATGGCCGCGCCTTCGCGGAGCGATGCGCCGACGATCGGC
ACCACTTCCGCTTCATCGTGTCGCCCGAGGACGCGGCGGACATGGCCGACCTTCGATCCTTCGCCCGCGACCTCGTCGGC
CAGATGGAGACGGACCTCGGCACCAAACTCGACTGGGTCGGCGTCGATCACTGGAACACCGACAATCCCCACCTGCACAT
CCTGGTGCGTGGCCAGACCGACGACGGCCAGGACCTCGTCATCTCCCGCGATTACATCAAGGAGGGCATGCGCGCCCGCG
CACAGGATCTGGTCACCCAGGAGCTGGGGCCGCACACCGACCTCGACATCCGCCGCGCCATCGAGCGGCAAGTGGAGGCG
GAGAGGTGGACGCAGCTCGACCGTCAACTGGTCCGGGACCAGCACGAGACCGGCGTGATCGACGTCGCGCCCCATGCCGA
TCGCCAGCCGGACGGGTTCCATGCCCTGAAGGTCGGGCGACTGCGCAAGCTCGAAACCCTCGGCTTCGCCGATCAGGTCG
GCCCCGGCCAGTGGGTGATCGACGAGAAGGCCGAAGCGACGCTCCGCGCGCTGGGCGAGCGCGGTGACATCATCAAGCGG
ATACACCGGGCCCTGACCGCGCAGGGCATCGAGCGCGGTACAGCAAGCTATGTGCTTTCCGGTGAGCGCCTCGATGCACC
TATCATCGGCCGCCTGGTCGATCGCGGGCTCGACGACGAGTTGAAGGGATCCGCCTATGCCGTGGTCGATGGCGTCGATG
GACGCACCCATCACATCCGGCTGCCCGACCTCGATTCGGCAGGCGATTGCGCTCCGGGCTCCATCGTCGAGCTGAGGAGG
TTCGAGGATGCCCGGGGCCAACAGCGGGCCGCGCTGGCGGTCCGCTCGGACCTCGACATCGAGCGACAGGTCACGGCAGC
CGGCGCCACCTGGCTCGACCGGCAGGCGCTCGCCCGCGAGCCCACCTCCCTCTCCGACAACGGCTTCGGCGGCGATGTGC
GGGACGCCAAGGACCGCCGTGCTGCACATCTGGTCGCCGAAGGCCTCGCCCAGCGTCAGGGCCAACACATCGTCTTCGCT
CGCGACCTCATCGAGACGTTGCGCCGGCAGGAGATAAGCGCACTGGGCGAGCGGCTCGCCGCCGGGAACGGGCAGCCTTT
CAAACGTGCCGGGACTGGTGAGTACGTCACCGGCACCTATCGCCAGCGCTTCGCCCTGGCCTCAGGCCGCTTCGCCATGA
TCGACGACGGCCTCGGCTTCCAGCTCGTGCCCTGGACGCCCTCGCTCGAGAAGCAGCTCGGCAAGCACGTCTCCGGTGTC
ACCCGGTCCGATGGTGGCATCGACTGGTCCTTCGGCCGCAAGCGCGGCCTCGGCCTCTGA

Upstream 100 bases:

>100_bases
ATTTCCGGCGCTTCGCACCTTGCGCCTCCGACTGGCAACTTGTCGCCGTGGCTCAAGTCTCTGGTTTTTCTGGTCTCCTC
GCACCTTGCGGAGCCGAGCC

Downstream 100 bases:

>100_bases
CCTCAAGCGCAAAAGGACCGCCGCATGTCCGCGACCAAGATCCTCTGGGGCCAGATCCTCGCAGTCTTCGCCATCGTGCT
CGCCACCACCTGGGGGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 579; Mature: 578

Protein sequence:

>579_residues
MADEHEFRVRPGRIRSSRAQRSRPFIAQALAAAQKAGGHVSRSGRISPGARSHFGRGRTASIVANRLLTGLSRIVVIKTR
VVRHTARATPLSAHLSYLHREGVTRDGEKARLFGPGAEEGDGRAFAERCADDRHHFRFIVSPEDAADMADLRSFARDLVG
QMETDLGTKLDWVGVDHWNTDNPHLHILVRGQTDDGQDLVISRDYIKEGMRARAQDLVTQELGPHTDLDIRRAIERQVEA
ERWTQLDRQLVRDQHETGVIDVAPHADRQPDGFHALKVGRLRKLETLGFADQVGPGQWVIDEKAEATLRALGERGDIIKR
IHRALTAQGIERGTASYVLSGERLDAPIIGRLVDRGLDDELKGSAYAVVDGVDGRTHHIRLPDLDSAGDCAPGSIVELRR
FEDARGQQRAALAVRSDLDIERQVTAAGATWLDRQALAREPTSLSDNGFGGDVRDAKDRRAAHLVAEGLAQRQGQHIVFA
RDLIETLRRQEISALGERLAAGNGQPFKRAGTGEYVTGTYRQRFALASGRFAMIDDGLGFQLVPWTPSLEKQLGKHVSGV
TRSDGGIDWSFGRKRGLGL

Sequences:

>Translated_579_residues
MADEHEFRVRPGRIRSSRAQRSRPFIAQALAAAQKAGGHVSRSGRISPGARSHFGRGRTASIVANRLLTGLSRIVVIKTR
VVRHTARATPLSAHLSYLHREGVTRDGEKARLFGPGAEEGDGRAFAERCADDRHHFRFIVSPEDAADMADLRSFARDLVG
QMETDLGTKLDWVGVDHWNTDNPHLHILVRGQTDDGQDLVISRDYIKEGMRARAQDLVTQELGPHTDLDIRRAIERQVEA
ERWTQLDRQLVRDQHETGVIDVAPHADRQPDGFHALKVGRLRKLETLGFADQVGPGQWVIDEKAEATLRALGERGDIIKR
IHRALTAQGIERGTASYVLSGERLDAPIIGRLVDRGLDDELKGSAYAVVDGVDGRTHHIRLPDLDSAGDCAPGSIVELRR
FEDARGQQRAALAVRSDLDIERQVTAAGATWLDRQALAREPTSLSDNGFGGDVRDAKDRRAAHLVAEGLAQRQGQHIVFA
RDLIETLRRQEISALGERLAAGNGQPFKRAGTGEYVTGTYRQRFALASGRFAMIDDGLGFQLVPWTPSLEKQLGKHVSGV
TRSDGGIDWSFGRKRGLGL
>Mature_578_residues
ADEHEFRVRPGRIRSSRAQRSRPFIAQALAAAQKAGGHVSRSGRISPGARSHFGRGRTASIVANRLLTGLSRIVVIKTRV
VRHTARATPLSAHLSYLHREGVTRDGEKARLFGPGAEEGDGRAFAERCADDRHHFRFIVSPEDAADMADLRSFARDLVGQ
METDLGTKLDWVGVDHWNTDNPHLHILVRGQTDDGQDLVISRDYIKEGMRARAQDLVTQELGPHTDLDIRRAIERQVEAE
RWTQLDRQLVRDQHETGVIDVAPHADRQPDGFHALKVGRLRKLETLGFADQVGPGQWVIDEKAEATLRALGERGDIIKRI
HRALTAQGIERGTASYVLSGERLDAPIIGRLVDRGLDDELKGSAYAVVDGVDGRTHHIRLPDLDSAGDCAPGSIVELRRF
EDARGQQRAALAVRSDLDIERQVTAAGATWLDRQALAREPTSLSDNGFGGDVRDAKDRRAAHLVAEGLAQRQGQHIVFAR
DLIETLRRQEISALGERLAAGNGQPFKRAGTGEYVTGTYRQRFALASGRFAMIDDGLGFQLVPWTPSLEKQLGKHVSGVT
RSDGGIDWSFGRKRGLGL

Specific function: Unknown

COG id: COG3843

COG function: function code U; Type IV secretory pathway, VirD2 components (relaxase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63843; Mature: 63711

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADEHEFRVRPGRIRSSRAQRSRPFIAQALAAAQKAGGHVSRSGRISPGARSHFGRGRTA
CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCHH
SIVANRLLTGLSRIVVIKTRVVRHTARATPLSAHLSYLHREGVTRDGEKARLFGPGAEEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCC
DGRAFAERCADDRHHFRFIVSPEDAADMADLRSFARDLVGQMETDLGTKLDWVGVDHWNT
CCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
DNPHLHILVRGQTDDGQDLVISRDYIKEGMRARAQDLVTQELGPHTDLDIRRAIERQVEA
CCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ERWTQLDRQLVRDQHETGVIDVAPHADRQPDGFHALKVGRLRKLETLGFADQVGPGQWVI
HHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE
DEKAEATLRALGERGDIIKRIHRALTAQGIERGTASYVLSGERLDAPIIGRLVDRGLDDE
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHCCCCHH
LKGSAYAVVDGVDGRTHHIRLPDLDSAGDCAPGSIVELRRFEDARGQQRAALAVRSDLDI
HCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCH
ERQVTAAGATWLDRQALAREPTSLSDNGFGGDVRDAKDRRAAHLVAEGLAQRQGQHIVFA
HHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEH
RDLIETLRRQEISALGERLAAGNGQPFKRAGTGEYVTGTYRQRFALASGRFAMIDDGLGF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHHHHHCCCCEEEEECCCCE
QLVPWTPSLEKQLGKHVSGVTRSDGGIDWSFGRKRGLGL
EEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADEHEFRVRPGRIRSSRAQRSRPFIAQALAAAQKAGGHVSRSGRISPGARSHFGRGRTA
CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCHH
SIVANRLLTGLSRIVVIKTRVVRHTARATPLSAHLSYLHREGVTRDGEKARLFGPGAEEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCC
DGRAFAERCADDRHHFRFIVSPEDAADMADLRSFARDLVGQMETDLGTKLDWVGVDHWNT
CCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
DNPHLHILVRGQTDDGQDLVISRDYIKEGMRARAQDLVTQELGPHTDLDIRRAIERQVEA
CCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ERWTQLDRQLVRDQHETGVIDVAPHADRQPDGFHALKVGRLRKLETLGFADQVGPGQWVI
HHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE
DEKAEATLRALGERGDIIKRIHRALTAQGIERGTASYVLSGERLDAPIIGRLVDRGLDDE
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHCCCCHH
LKGSAYAVVDGVDGRTHHIRLPDLDSAGDCAPGSIVELRRFEDARGQQRAALAVRSDLDI
HCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCH
ERQVTAAGATWLDRQALAREPTSLSDNGFGGDVRDAKDRRAAHLVAEGLAQRQGQHIVFA
HHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEH
RDLIETLRRQEISALGERLAAGNGQPFKRAGTGEYVTGTYRQRFALASGRFAMIDDGLGF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHHHHHCCCCEEEEECCCCE
QLVPWTPSLEKQLGKHVSGVTRSDGGIDWSFGRKRGLGL
EEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA