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The map label for this gene is 154247921

Identifier: 154247921

GI number: 154247921

Start: 4427867

End: 4428199

Strand: Reverse

Name: 154247921

Synonym: Xaut_3999

Alternate gene names: NA

Gene position: 4428199-4427867 (Counterclockwise)

Preceding gene: 154247922

Following gene: 154247920

Centisome position: 83.41

GC content: 64.26

Gene sequence:

>333_bases
GTGACTTTCACGCTCCCTCCATTCTACCGCCGATTGCTGCAGGCCGTGGCCGGTGCCACCGCCTGCGTGTGTGTTGTCTC
CGCGGCCCACGCCTCCGGCTCCTCCATGCCGTGGGAAACGCCGCTGCAGTCGATCCTGGATTCGATCCAGGGGCCAGTCG
CCAAGATCATCGCGGTGATCGTCATTATCTCCACCGGCCTCGCGCTCGCCTTCGGCGACACCTCTGGCGGATTCCGGCGG
CTGATCCAGATCGTATTCGGCCTCTCCATCGCCTTCGCCGCTTCGAGCTTCTTCCTCTCCTTCTTCTCCTTCAGCGGCGG
AGCGCTGGTCTGA

Upstream 100 bases:

>100_bases
CGCGCCGCCTTTCCGAGCTCTCTCACGTCGAAGGTCTCGGGCCCGACGGCGACTACCGCGTCATCCCCATCACCGCTCCA
TCCGAAGAAGGAACCTCCCT

Downstream 100 bases:

>100_bases
TGCCGGGCGATATTGGCGGGGTGCCGGGCTTCTCCGTCCCGGTCCATCGGGCCTTGAGCGAGCCGATCCTGCTCGGCGGC
GCGCCGCGGGCAATCGCCAT

Product: conjugal transfer protein TrbC

Products: NA

Alternate protein names: Conjugal Transfer Protein Trbc; TrbC-Like Protein; Conjugative Transfer Protein TrbC; Conjugal Transfer Protein; Conjugal Transfer TrbC Transmembrane Protein

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MTFTLPPFYRRLLQAVAGATACVCVVSAAHASGSSMPWETPLQSILDSIQGPVAKIIAVIVIISTGLALAFGDTSGGFRR
LIQIVFGLSIAFAASSFFLSFFSFSGGALV

Sequences:

>Translated_110_residues
MTFTLPPFYRRLLQAVAGATACVCVVSAAHASGSSMPWETPLQSILDSIQGPVAKIIAVIVIISTGLALAFGDTSGGFRR
LIQIVFGLSIAFAASSFFLSFFSFSGGALV
>Mature_109_residues
TFTLPPFYRRLLQAVAGATACVCVVSAAHASGSSMPWETPLQSILDSIQGPVAKIIAVIVIISTGLALAFGDTSGGFRRL
IQIVFGLSIAFAASSFFLSFFSFSGGALV

Specific function: Unknown

COG id: COG3838

COG function: function code U; Type IV secretory pathway, VirB2 components (pilins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11434; Mature: 11302

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFTLPPFYRRLLQAVAGATACVCVVSAAHASGSSMPWETPLQSILDSIQGPVAKIIAVI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
VIISTGLALAFGDTSGGFRRLIQIVFGLSIAFAASSFFLSFFSFSGGALV
HHHHHCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TFTLPPFYRRLLQAVAGATACVCVVSAAHASGSSMPWETPLQSILDSIQGPVAKIIAVI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
VIISTGLALAFGDTSGGFRRLIQIVFGLSIAFAASSFFLSFFSFSGGALV
HHHHHCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA