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The map label for this gene is trbB [H]

Identifier: 154247922

GI number: 154247922

Start: 4428196

End: 4429182

Strand: Reverse

Name: trbB [H]

Synonym: Xaut_4000

Alternate gene names: 154247922

Gene position: 4429182-4428196 (Counterclockwise)

Preceding gene: 154247927

Following gene: 154247921

Centisome position: 83.43

GC content: 68.59

Gene sequence:

>987_bases
ATGGCGACTTCACCTCACAGTTCGGAAGGCCTGACACGCGGCGAACGCATGTTGCGCACCGCGCTTGGCCCGATGATCAC
CCGCCTTCTTGAAGACCCGGCCGTCGTCGAGGTCATGCTCAATCCGGACGGGCGCCTGTGGGTCGACCGGCTGTCCGAGG
GGCTTCGCGATACAGGCGAGCGATTAGCCGCCGCCGATGGCGAACGCATCGTCCGCCTCGTTGCGCACCATATCGGCGCC
GAGGTCCATGCCGGCGCCCCGCGGGTGTCAGCCGAACTGCCGGGAACGGGAGAGCGGTTCGAAGGCCTGCTCCCGCCCGT
CGTGGCCTCCCCGACCTTCGCCATCCGCAAACCGGCCGCCGCCGTCTTCACGCTCGACGACTATGTCGCCGCCGGCATCA
TGTCTGCGCCGCAGGCCGAAGCCCTGCGCCATGGCGTCGCCTCCCGCGCCAACATCCTGGTCGCCGGCGGCACCTCCACC
GGCAAGACCACGCTCACCAACGCGCTGCTCGCCGAGGTGACCAAGACCTCCGAACGCGTCGTCCTCATCGAGGACACACG
AGAACTCCAATGCGCAGCCCCCAACCTTGTAGCGATGCGCACCAAGGACGGCGTCGCCTCGCTCTCGGACCTCGTCCGCT
CATCGCTGCGCCTGCGGCCGGATCGCATCCCCATCGGCGAGGTCCGAGGTGCCGAAGCCCTTGACCTCCTGAAGGCCTGG
GGCACAGGCCACCCTGGGGGCATCGGCACCATCCACGCCGGCAGCGCCATCGGGGCCTTGAGGCGTCTCGAGCAACTCAT
CCAGGAAGCCGTCGTCACCGTACCTCGGGCCCTGATCGCCGAGACCATCGACCTCATCGCCGTGCTGTCGGGCCGCGGCT
CCGCGCGCCGCCTTTCCGAGCTCTCTCACGTCGAAGGTCTCGGGCCCGACGGCGACTACCGCGTCATCCCCATCACCGCT
CCATCCGAAGAAGGAACCTCCCTGTGA

Upstream 100 bases:

>100_bases
TCTTAAGTATCTGCACGCCAGACCGCGACGGCCGCATTGGCTTGTTGAAACCTCCCAATTTCCGGCTCTTTTAATCATCC
CCGGCATGGGCGGGGATGAG

Downstream 100 bases:

>100_bases
CTTTCACGCTCCCTCCATTCTACCGCCGATTGCTGCAGGCCGTGGCCGGTGCCACCGCCTGCGTGTGTGTTGTCTCCGCG
GCCCACGCCTCCGGCTCCTC

Product: P-type conjugative transfer ATPase TrbB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MATSPHSSEGLTRGERMLRTALGPMITRLLEDPAVVEVMLNPDGRLWVDRLSEGLRDTGERLAAADGERIVRLVAHHIGA
EVHAGAPRVSAELPGTGERFEGLLPPVVASPTFAIRKPAAAVFTLDDYVAAGIMSAPQAEALRHGVASRANILVAGGTST
GKTTLTNALLAEVTKTSERVVLIEDTRELQCAAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
GTGHPGGIGTIHAGSAIGALRRLEQLIQEAVVTVPRALIAETIDLIAVLSGRGSARRLSELSHVEGLGPDGDYRVIPITA
PSEEGTSL

Sequences:

>Translated_328_residues
MATSPHSSEGLTRGERMLRTALGPMITRLLEDPAVVEVMLNPDGRLWVDRLSEGLRDTGERLAAADGERIVRLVAHHIGA
EVHAGAPRVSAELPGTGERFEGLLPPVVASPTFAIRKPAAAVFTLDDYVAAGIMSAPQAEALRHGVASRANILVAGGTST
GKTTLTNALLAEVTKTSERVVLIEDTRELQCAAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
GTGHPGGIGTIHAGSAIGALRRLEQLIQEAVVTVPRALIAETIDLIAVLSGRGSARRLSELSHVEGLGPDGDYRVIPITA
PSEEGTSL
>Mature_327_residues
ATSPHSSEGLTRGERMLRTALGPMITRLLEDPAVVEVMLNPDGRLWVDRLSEGLRDTGERLAAADGERIVRLVAHHIGAE
VHAGAPRVSAELPGTGERFEGLLPPVVASPTFAIRKPAAAVFTLDDYVAAGIMSAPQAEALRHGVASRANILVAGGTSTG
KTTLTNALLAEVTKTSERVVLIEDTRELQCAAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAWG
TGHPGGIGTIHAGSAIGALRRLEQLIQEAVVTVPRALIAETIDLIAVLSGRGSARRLSELSHVEGLGPDGDYRVIPITAP
SEEGTSL

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014149
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 34503; Mature: 34372

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSPHSSEGLTRGERMLRTALGPMITRLLEDPAVVEVMLNPDGRLWVDRLSEGLRDTGE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
RLAAADGERIVRLVAHHIGAEVHAGAPRVSAELPGTGERFEGLLPPVVASPTFAIRKPAA
HHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHCCCCHHHCCCCC
AVFTLDDYVAAGIMSAPQAEALRHGVASRANILVAGGTSTGKTTLTNALLAEVTKTSERV
EEEEHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCE
VLIEDTRELQCAAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
EEEECCCCCEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
GTGHPGGIGTIHAGSAIGALRRLEQLIQEAVVTVPRALIAETIDLIAVLSGRGSARRLSE
CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LSHVEGLGPDGDYRVIPITAPSEEGTSL
HHHHCCCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure 
ATSPHSSEGLTRGERMLRTALGPMITRLLEDPAVVEVMLNPDGRLWVDRLSEGLRDTGE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
RLAAADGERIVRLVAHHIGAEVHAGAPRVSAELPGTGERFEGLLPPVVASPTFAIRKPAA
HHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHCCCCHHHCCCCC
AVFTLDDYVAAGIMSAPQAEALRHGVASRANILVAGGTSTGKTTLTNALLAEVTKTSERV
EEEEHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCE
VLIEDTRELQCAAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
EEEECCCCCEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
GTGHPGGIGTIHAGSAIGALRRLEQLIQEAVVTVPRALIAETIDLIAVLSGRGSARRLSE
CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LSHVEGLGPDGDYRVIPITAPSEEGTSL
HHHHCCCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]