| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is yqgH [H]
Identifier: 154247878
GI number: 154247878
Start: 4377462
End: 4378409
Strand: Reverse
Name: yqgH [H]
Synonym: Xaut_3955
Alternate gene names: 154247878
Gene position: 4378409-4377462 (Counterclockwise)
Preceding gene: 154247879
Following gene: 154247877
Centisome position: 82.47
GC content: 61.6
Gene sequence:
>948_bases GTGGTCGCACCGGTGTCTCCAGACTCAAGAACAGGCCGGTTGCGCCTGACGGTTTCTCCGGTCTTCCTGGCGCGACGCCG GGTGGTGGACCGCATCATGCGCGTTGTCCTGTTTCTCAGTGCCGCACTCTCTGTCCTGGTCACGGCGGGCATCGTCTACG TCCTCCTGTCCGAAAGCCTGAAATTCTTCGCACAGGTGTCGATCATCTCCTTCCTGACCGACACACAATGGACGCCGGTG TTTCAGGACAAGCACTTCGGCATCATGACTCTGGTATCCGGTACTTTGGTGAGTTCGCTCATCGCCCTGCTCGTCGCGAT TCCAGCCGGTACCGTGCTCGCAATCTATCTGTCGGAGTTCGCGCGGCCACAGGTGCGCGAGACCATCAAGCCGTTTCTGG AGCTTATCGCAGGCGTGCCGACTGTGGCATTCGGCTATTTCGCTCTTTTGTTCCTCACGCCCATCTTCCAGATCTTCATT CCCGGGCTGGCGGGCTTCAACCTGCTCGTGCCGGGCATCGTCATGGGCATCATGATCCTGCCCTACATCGTTTCCGTGAG CGAGGACGCCATGCGCGCGGTCCCTGCGGAACTGAGGGAGGGGGCCTATGCGCTGGGCTTCACGCGGCTCCAGACGGCGA CGCGGGTGGTGATCCCCGGCGCCTTCTCCGGGGTGACGGCGGCCTACATCCTCGGCATGTCGCGGGCGGTGGGCGAGACC ATGGTGGTGGCCATTGCTGCGGGCCAGCAGGCGAAGCTCGCCCTGAACCCTCTGGAGGGCGCAGCCACGATCACCTCCTA TATCGTCCAGATCAGCCTCGGCGACGTGCCACATGGCTCCATCGCTTATCTCACCATCTTCGCGGCGGGCATGACGCTGT TCCTCATGACTTTCGCCTTCAACATTCTCGCCTTCTGGCTCCGCCAGAAATACCGTGAAGTCTATTGA
Upstream 100 bases:
>100_bases CGAGGATCTCGTCAAGGAAAAGCTCGTCTACTGACAGGTGATCTTGAGGGACCTGAGGGAGGTGCTCCGGCGCCTCCCTC CATTCAGGTGAGGGTTGGAC
Downstream 100 bases:
>100_bases GGGGATGGCCGTGAAGCCGCTCGCCGCTCAACCCTCCCGCCGCCTCTCCGACGCGGAAATCGTCGCTCGGGCGCATCGGT CCGACCGCAATTTCGCGATC
Product: phosphate ABC transporter inner membrane subunit PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MVAPVSPDSRTGRLRLTVSPVFLARRRVVDRIMRVVLFLSAALSVLVTAGIVYVLLSESLKFFAQVSIISFLTDTQWTPV FQDKHFGIMTLVSGTLVSSLIALLVAIPAGTVLAIYLSEFARPQVRETIKPFLELIAGVPTVAFGYFALLFLTPIFQIFI PGLAGFNLLVPGIVMGIMILPYIVSVSEDAMRAVPAELREGAYALGFTRLQTATRVVIPGAFSGVTAAYILGMSRAVGET MVVAIAAGQQAKLALNPLEGAATITSYIVQISLGDVPHGSIAYLTIFAAGMTLFLMTFAFNILAFWLRQKYREVY
Sequences:
>Translated_315_residues MVAPVSPDSRTGRLRLTVSPVFLARRRVVDRIMRVVLFLSAALSVLVTAGIVYVLLSESLKFFAQVSIISFLTDTQWTPV FQDKHFGIMTLVSGTLVSSLIALLVAIPAGTVLAIYLSEFARPQVRETIKPFLELIAGVPTVAFGYFALLFLTPIFQIFI PGLAGFNLLVPGIVMGIMILPYIVSVSEDAMRAVPAELREGAYALGFTRLQTATRVVIPGAFSGVTAAYILGMSRAVGET MVVAIAAGQQAKLALNPLEGAATITSYIVQISLGDVPHGSIAYLTIFAAGMTLFLMTFAFNILAFWLRQKYREVY >Mature_315_residues MVAPVSPDSRTGRLRLTVSPVFLARRRVVDRIMRVVLFLSAALSVLVTAGIVYVLLSESLKFFAQVSIISFLTDTQWTPV FQDKHFGIMTLVSGTLVSSLIALLVAIPAGTVLAIYLSEFARPQVRETIKPFLELIAGVPTVAFGYFALLFLTPIFQIFI PGLAGFNLLVPGIVMGIMILPYIVSVSEDAMRAVPAELREGAYALGFTRLQTATRVVIPGAFSGVTAAYILGMSRAVGET MVVAIAAGQQAKLALNPLEGAATITSYIVQISLGDVPHGSIAYLTIFAAGMTLFLMTFAFNILAFWLRQKYREVY
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=254, Percent_Identity=29.1338582677165, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1790163, Length=218, Percent_Identity=25.2293577981651, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 34091; Mature: 34091
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAPVSPDSRTGRLRLTVSPVFLARRRVVDRIMRVVLFLSAALSVLVTAGIVYVLLSESL CCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KFFAQVSIISFLTDTQWTPVFQDKHFGIMTLVSGTLVSSLIALLVAIPAGTVLAIYLSEF HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH ARPQVRETIKPFLELIAGVPTVAFGYFALLFLTPIFQIFIPGLAGFNLLVPGIVMGIMIL CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH PYIVSVSEDAMRAVPAELREGAYALGFTRLQTATRVVIPGAFSGVTAAYILGMSRAVGET HHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHCHH MVVAIAAGQQAKLALNPLEGAATITSYIVQISLGDVPHGSIAYLTIFAAGMTLFLMTFAF EEEEEECCCCCEEEECCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHH NILAFWLRQKYREVY HHHHHHHHHHHHHCC >Mature Secondary Structure MVAPVSPDSRTGRLRLTVSPVFLARRRVVDRIMRVVLFLSAALSVLVTAGIVYVLLSESL CCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KFFAQVSIISFLTDTQWTPVFQDKHFGIMTLVSGTLVSSLIALLVAIPAGTVLAIYLSEF HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH ARPQVRETIKPFLELIAGVPTVAFGYFALLFLTPIFQIFIPGLAGFNLLVPGIVMGIMIL CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH PYIVSVSEDAMRAVPAELREGAYALGFTRLQTATRVVIPGAFSGVTAAYILGMSRAVGET HHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHCHH MVVAIAAGQQAKLALNPLEGAATITSYIVQISLGDVPHGSIAYLTIFAAGMTLFLMTFAF EEEEEECCCCCEEEECCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHH NILAFWLRQKYREVY HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]