| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is sphX [H]
Identifier: 154247879
GI number: 154247879
Start: 4378476
End: 4379477
Strand: Reverse
Name: sphX [H]
Synonym: Xaut_3956
Alternate gene names: 154247879
Gene position: 4379477-4378476 (Counterclockwise)
Preceding gene: 154247893
Following gene: 154247878
Centisome position: 82.49
GC content: 63.17
Gene sequence:
>1002_bases ATGAAGATCATCACTCTCGCGAGCGCCCTCGCGCTGCTCGCTACCGGCGCGGCCTTCAACGGCGCCGCTGCCCAGGCACT GGTCAAGGTCGACGGGTCGTCCACGGTATTCCCCGTGACCGAAGCCATGGCGGAGGAATTCCAGAAGGCGAACAAGGATA TCAAGGTGACGGTCGGCATCTCCGGTACCGGCGGCGGCTTCAAGAAGTTCTGCCGCGGAGAGATCGACATCTCCGACGCC TCGCGCCCCATCACCTCCGCCGAGCAGAAGGCCTGCAAGGAAGCCGGCATCGAGTATATCGAATTGCCGGTCGCCCTTGA TGCGCTCACGGTCATCGTCCACCCGTCCAACACCTGGGCGAGCGAGATGACGGTTGCGGATCTGAAGAAGATCTGGGAGC CCGAGGCCCAGGGCAAGATCACCAACTGGAAGCAGGTCCGCGACAGCTACCCGGATCGGCCGCTGGTGCTCTACGGCGCG GGCGTCGACTCAGGCACTTACGACTATTTCACCGCCGCCATCGTCGGCAAGGAGCATTCCAGCCGCGGCGACTTCACCGC ATCGGAGGATGACAACGTGCTGGTCCAGGGCGTGGCGGGCGATCCCAACGCCCTCGGCTTTTTCGGCCTTGCTTACTATG AAGAGAACACCGGCAAGCTGAAGGCGGTGAAGATCAAGGTCGATGACGCCGCGCCCGCCGTGGAGCCGTCGGTCGAGAAC GCCCGCACCGGCAAGTACCAGCCTCTGTCGCGGCCGATCTTCATCTACGTGAACAAGAAGGCGGCCGAAACCCGTCCGGA GGTGGCGAAGTTCGTTGAGTTCTACCAGGACCCGAAGCACGCGGTCGAGCTGGTCAAGGAAGTCGGCTATGTGCCGCTGC CCGAGGCCGCCCTGAAGGTGTTCCAGGAGCGCTTCAAGAAGCGTGAGATCGGCACCGGCTTCACCGGGTCCAAGGTCGGC GTCTCCGTCGAGGATCTCGTCAAGGAAAAGCTCGTCTACTGA
Upstream 100 bases:
>100_bases CACAAATTGTCATGAATTTGTTACATAACATGCTTAGAGCCCGTGAGGCTAGGTGAGCATCAGAAGCCCTAGCGGCACTG TCCAGGGAGACGGCATCCTC
Downstream 100 bases:
>100_bases CAGGTGATCTTGAGGGACCTGAGGGAGGTGCTCCGGCGCCTCCCTCCATTCAGGTGAGGGTTGGACGTGGTCGCACCGGT GTCTCCAGACTCAAGAACAG
Product: phosphate binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MKIITLASALALLATGAAFNGAAAQALVKVDGSSTVFPVTEAMAEEFQKANKDIKVTVGISGTGGGFKKFCRGEIDISDA SRPITSAEQKACKEAGIEYIELPVALDALTVIVHPSNTWASEMTVADLKKIWEPEAQGKITNWKQVRDSYPDRPLVLYGA GVDSGTYDYFTAAIVGKEHSSRGDFTASEDDNVLVQGVAGDPNALGFFGLAYYEENTGKLKAVKIKVDDAAPAVEPSVEN ARTGKYQPLSRPIFIYVNKKAAETRPEVAKFVEFYQDPKHAVELVKEVGYVPLPEAALKVFQERFKKREIGTGFTGSKVG VSVEDLVKEKLVY
Sequences:
>Translated_333_residues MKIITLASALALLATGAAFNGAAAQALVKVDGSSTVFPVTEAMAEEFQKANKDIKVTVGISGTGGGFKKFCRGEIDISDA SRPITSAEQKACKEAGIEYIELPVALDALTVIVHPSNTWASEMTVADLKKIWEPEAQGKITNWKQVRDSYPDRPLVLYGA GVDSGTYDYFTAAIVGKEHSSRGDFTASEDDNVLVQGVAGDPNALGFFGLAYYEENTGKLKAVKIKVDDAAPAVEPSVEN ARTGKYQPLSRPIFIYVNKKAAETRPEVAKFVEFYQDPKHAVELVKEVGYVPLPEAALKVFQERFKKREIGTGFTGSKVG VSVEDLVKEKLVY >Mature_333_residues MKIITLASALALLATGAAFNGAAAQALVKVDGSSTVFPVTEAMAEEFQKANKDIKVTVGISGTGGGFKKFCRGEIDISDA SRPITSAEQKACKEAGIEYIELPVALDALTVIVHPSNTWASEMTVADLKKIWEPEAQGKITNWKQVRDSYPDRPLVLYGA GVDSGTYDYFTAAIVGKEHSSRGDFTASEDDNVLVQGVAGDPNALGFFGLAYYEENTGKLKAVKIKVDDAAPAVEPSVEN ARTGKYQPLSRPIFIYVNKKAAETRPEVAKFVEFYQDPKHAVELVKEVGYVPLPEAALKVFQERFKKREIGTGFTGSKVG VSVEDLVKEKLVY
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell inner membrane. Note=Found in the cytoplasmic membrane in a form that is closely associated with the cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 35995; Mature: 35995
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIITLASALALLATGAAFNGAAAQALVKVDGSSTVFPVTEAMAEEFQKANKDIKVTVGI CEEEHHHHHHHHHHCCCCCCCHHHEEEEEECCCCEEEHHHHHHHHHHHHCCCCEEEEEEE SGTGGGFKKFCRGEIDISDASRPITSAEQKACKEAGIEYIELPVALDALTVIVHPSNTWA CCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECEEEEEEEEEEECCCCCH SEMTVADLKKIWEPEAQGKITNWKQVRDSYPDRPLVLYGAGVDSGTYDYFTAAIVGKEHS HHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCHHHEEEEEECCCCC SRGDFTASEDDNVLVQGVAGDPNALGFFGLAYYEENTGKLKAVKIKVDDAAPAVEPSVEN CCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCC ARTGKYQPLSRPIFIYVNKKAAETRPEVAKFVEFYQDPKHAVELVKEVGYVPLPEAALKV CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHH FQERFKKREIGTGFTGSKVGVSVEDLVKEKLVY HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MKIITLASALALLATGAAFNGAAAQALVKVDGSSTVFPVTEAMAEEFQKANKDIKVTVGI CEEEHHHHHHHHHHCCCCCCCHHHEEEEEECCCCEEEHHHHHHHHHHHHCCCCEEEEEEE SGTGGGFKKFCRGEIDISDASRPITSAEQKACKEAGIEYIELPVALDALTVIVHPSNTWA CCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECEEEEEEEEEEECCCCCH SEMTVADLKKIWEPEAQGKITNWKQVRDSYPDRPLVLYGAGVDSGTYDYFTAAIVGKEHS HHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCHHHEEEEEECCCCC SRGDFTASEDDNVLVQGVAGDPNALGFFGLAYYEENTGKLKAVKIKVDDAAPAVEPSVEN CCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCC ARTGKYQPLSRPIFIYVNKKAAETRPEVAKFVEFYQDPKHAVELVKEVGYVPLPEAALKV CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHH FQERFKKREIGTGFTGSKVGVSVEDLVKEKLVY HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7741855 [H]