| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247788
Identifier: 154247788
GI number: 154247788
Start: 4282453
End: 4283349
Strand: Reverse
Name: 154247788
Synonym: Xaut_3865
Alternate gene names: NA
Gene position: 4283349-4282453 (Counterclockwise)
Preceding gene: 154247790
Following gene: 154247787
Centisome position: 80.68
GC content: 72.35
Gene sequence:
>897_bases ATGGCTGGCCTTGGACGCGCCCAGCGCCGCTCCGGCGGTATGGAGGACACCTTCCGGGATTATGGTACGGAAGGCGGCTT CGACGTTTCCAACAATCGGCGGGATACGCCCCGCCCCCGCATCGGTTCAAGCGCCCGCGCCCGCCCGCCCCGCCGCAAGG CACGGGACGGGCTTGTGTTGTGGCGTGCGCTGGCCCTTTCCGCTTCGTTCCTGATCCTCGGCATGGGGGGCGTGGTCGCC TACCATGCCATGACGCCCGACCGCCCCGCCCCCGATGGCGCGGCCCCGAAAGCCACGGCCGCGACCGCCCCCGCTGCGAA GACCGCGAGCGACACCCGCCCGCAGCAGCCGCCCGTTCTCAAGACCGCCGATGGCGGGCACGCGCAGATGTCCACCAAGG TCGCCTCCATCCTCGGCGCTCCCGCACCCTCGGCCGCGCCGGCCCAACCGGAGCGCGCCAACGCGCTTCAGGTGGCGACG GCAATTCATGCCTCGGCACCGGCGGAGCCGGCCCCCACCGCCGCCGATTTCGCCCGTCCCGCCTTCCTCGAACCGGTCAG CGGTGACGAGGCGGGCGACGACGCCATCCTGCCCGAGGGCGCCACCCAGACGGTTGCCGACACCGCACCGGCGACGGGGG CGCCGCTTCCCAAGGCCAAGCCCAGCGCCGTCGCCGTGGCCTCGGCAGACGCTGGCAAGGCCGGTGCCGATGACGACGGC CGCACCGCCCGCATCCGCTCCGCCGTGACGCTGCGTTCCGGGCCGAAGCGCTCGGCCTCCGCCATCGGGACGCTGGACGA GGGCACCAAGGTGACCCTCTATTCCTGCAAGTCCTGGTGCGAAGTGTCGGTCGGCGACAAGCGCGGCTTCGTCTACAAGG CAGCAGTGGTACAGTGA
Upstream 100 bases:
>100_bases CCGAGAGCAGCCGGATCCTCGCGCGGTCGATAGGCCCAAAGAAATGGATCCTCGAGCCTCTGCCTCTTCCGGCGCAGGCG GCTTGGCAGGAGGTATATAT
Downstream 100 bases:
>100_bases AGGAATGGCGGTGAGCCTGCCTCATCCGCCACAAGGCCAATCCCGCGCCGCGCCTGAGGGTGCTGCAAGACCGGCACGCG GGACCGGTCGGCGCCGCGCG
Product: SH3 type 3 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MAGLGRAQRRSGGMEDTFRDYGTEGGFDVSNNRRDTPRPRIGSSARARPPRRKARDGLVLWRALALSASFLILGMGGVVA YHAMTPDRPAPDGAAPKATAATAPAAKTASDTRPQQPPVLKTADGGHAQMSTKVASILGAPAPSAAPAQPERANALQVAT AIHASAPAEPAPTAADFARPAFLEPVSGDEAGDDAILPEGATQTVADTAPATGAPLPKAKPSAVAVASADAGKAGADDDG RTARIRSAVTLRSGPKRSASAIGTLDEGTKVTLYSCKSWCEVSVGDKRGFVYKAAVVQ
Sequences:
>Translated_298_residues MAGLGRAQRRSGGMEDTFRDYGTEGGFDVSNNRRDTPRPRIGSSARARPPRRKARDGLVLWRALALSASFLILGMGGVVA YHAMTPDRPAPDGAAPKATAATAPAAKTASDTRPQQPPVLKTADGGHAQMSTKVASILGAPAPSAAPAQPERANALQVAT AIHASAPAEPAPTAADFARPAFLEPVSGDEAGDDAILPEGATQTVADTAPATGAPLPKAKPSAVAVASADAGKAGADDDG RTARIRSAVTLRSGPKRSASAIGTLDEGTKVTLYSCKSWCEVSVGDKRGFVYKAAVVQ >Mature_297_residues AGLGRAQRRSGGMEDTFRDYGTEGGFDVSNNRRDTPRPRIGSSARARPPRRKARDGLVLWRALALSASFLILGMGGVVAY HAMTPDRPAPDGAAPKATAATAPAAKTASDTRPQQPPVLKTADGGHAQMSTKVASILGAPAPSAAPAQPERANALQVATA IHASAPAEPAPTAADFARPAFLEPVSGDEAGDDAILPEGATQTVADTAPATGAPLPKAKPSAVAVASADAGKAGADDDGR TARIRSAVTLRSGPKRSASAIGTLDEGTKVTLYSCKSWCEVSVGDKRGFVYKAAVVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30340; Mature: 30209
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLGRAQRRSGGMEDTFRDYGTEGGFDVSNNRRDTPRPRIGSSARARPPRRKARDGLVL CCCCCCHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH WRALALSASFLILGMGGVVAYHAMTPDRPAPDGAAPKATAATAPAAKTASDTRPQQPPVL HHHHHHHHHHEEEECCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE KTADGGHAQMSTKVASILGAPAPSAAPAQPERANALQVATAIHASAPAEPAPTAADFARP EECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCC AFLEPVSGDEAGDDAILPEGATQTVADTAPATGAPLPKAKPSAVAVASADAGKAGADDDG CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC RTARIRSAVTLRSGPKRSASAIGTLDEGTKVTLYSCKSWCEVSVGDKRGFVYKAAVVQ CEEEHHHEEEECCCCCCCHHHCCCCCCCCEEEEEECCCCEEECCCCCCCEEEEEEECC >Mature Secondary Structure AGLGRAQRRSGGMEDTFRDYGTEGGFDVSNNRRDTPRPRIGSSARARPPRRKARDGLVL CCCCCHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH WRALALSASFLILGMGGVVAYHAMTPDRPAPDGAAPKATAATAPAAKTASDTRPQQPPVL HHHHHHHHHHEEEECCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE KTADGGHAQMSTKVASILGAPAPSAAPAQPERANALQVATAIHASAPAEPAPTAADFARP EECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCC AFLEPVSGDEAGDDAILPEGATQTVADTAPATGAPLPKAKPSAVAVASADAGKAGADDDG CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC RTARIRSAVTLRSGPKRSASAIGTLDEGTKVTLYSCKSWCEVSVGDKRGFVYKAAVVQ CEEEHHHEEEECCCCCCCHHHCCCCCCCCEEEEEECCCCEEECCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA