| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247730
Identifier: 154247730
GI number: 154247730
Start: 4219246
End: 4220532
Strand: Reverse
Name: 154247730
Synonym: Xaut_3806
Alternate gene names: NA
Gene position: 4220532-4219246 (Counterclockwise)
Preceding gene: 154247731
Following gene: 154247729
Centisome position: 79.5
GC content: 65.5
Gene sequence:
>1287_bases TTGACCGGGACCATTCTTGTCATTTCCCATGGCCATGTGGATTTCAGCGCCGGCGGCGCCGAAGTTGCGGCCTATCAACT GTTCGCGGCCCTGGGCAAGGCGGAGGCCGCGCGCAAGGTGGTCCTGCTCGCAGGCCATCACGCGGGCGAGCAGTCCGGCC TCATCACCGTTTTGCGGAACAACGAGTTTCTCTGGCGCACCGGCATGCGGGACTGGTTCAAGTTCCAATCCGGCGTGCGC GATGCCGTGACGGCTTCGTTCCGGCGCTTTCTCGGCGGGCTGAAGCCCGACATCGTGTTCGTTCACCATTACGCCCATAT GGGCCTGGAACTGCTTCGGGAAATCCGGCACACCTGCCCCCGGGCGAAGATCGTGCTGACGCTCCACGAATTCCAGGCGA TCTGCGCCAACAACGGCCAGATGGTGAAGCGCGGCTCTGCCGAATTGTGCTTTGGCGAGAGTCTTCAGGCGTGCGTGGGT TGCTACCCGGATCGCAGCGAAGAAGACTTCTGGCTGCGCAAGCATTTCATCCGCCGCCATTTCGATGCGGTGGATCGCTT CATCGCGCCGTCCGAATTCCTGCGTCAGCGCTACATCTCCTGGGGCCTGCCGGCGGAACGGATCGCCGTCATCGAGAACG GGCAGCCGGAGGGCGCGCGCCTCCCGCCGCGCACGCTGCCGCCCGGCGGATCGCGCAACCGCTTCGCATTTTTCGGGCAG GTGACGCCGTTCAAGGGCGTGGACGTGCTTTTGTCCGCCCTCGCCAACCTGCCCCGCAAGCAGCGCAAGGATATCCACGT CGAGATTCACGGCGCCAACCTCGAACACCAGGAAGAGACCTTCCGCAACCGGATCGAAGCGCTGCGACGGCCGTTGATGG AGGAAGGCGTGCTGCACTGGCCCGGAGCCTACCACCGCGACGACCTGGGCCGCCGCATGGCCCGCATCGACTGGGTGGTG GTGCCGTCCGTGTGGTGGGAAAACTCCCCCGTGGTCATCCAGGAGGCCTTCCGCTTCGGTCGGCCGCTGCTCTGCTCGAA CATCGGCGGAATGGCGGAACACGTGCGCGACGGCATCGACGGCTTGCACGTGGGCGTCGGCAATACCTCCGACTGGGGCG AGACGCTCCTATCCGCCGCCGCAGACATGGATGGCTGGGACCGCTTCTACAGCACCATGAAGACGCCGCTGCCTGTCGAG CGGGCGGCCGAACGCTATCTGGCCTGGGCGCTTGAGAACGCCAGTCCCGCCCTTCGCGCTTCGACGCGCCTTGCCGCCGA CGTATGA
Upstream 100 bases:
>100_bases TCCGGGTGCGGGTGATGTTGTTCAACGCCTGGCTGCACCAGGAGCGCTGGCGCGAGGCGCTGGATCGACACGCGATGCAC GGGATGGCGGGAGAGCGTCT
Downstream 100 bases:
>100_bases TGTGACCTCGACAGGTGGGGGCAGGCGCTCACGCTACGCCCACCCCGGACTACCTCATTCTTAAACTGCTAAAAACAACT TGTGGCGCGCTTTTGCTCGA
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Transferase; Glycosyl Transferase; Capsular Polysaccharide Bisynthesis Glycosyl Transferase; LPS Biosynthesis RfbU Related Protein; Glycosyltransferase Protein; Glycosyl Transferase Gt4C; Polysaccharide Biosynthesis Protein; Lipopolysaccharide N-Acetyl-Glycoaminyltransferase; Hexosyltransferase; Glycosyl Transferase GT4 Family Protein; Glycosyltransferase Forming Alpha Glycosyl Linkages
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MTGTILVISHGHVDFSAGGAEVAAYQLFAALGKAEAARKVVLLAGHHAGEQSGLITVLRNNEFLWRTGMRDWFKFQSGVR DAVTASFRRFLGGLKPDIVFVHHYAHMGLELLREIRHTCPRAKIVLTLHEFQAICANNGQMVKRGSAELCFGESLQACVG CYPDRSEEDFWLRKHFIRRHFDAVDRFIAPSEFLRQRYISWGLPAERIAVIENGQPEGARLPPRTLPPGGSRNRFAFFGQ VTPFKGVDVLLSALANLPRKQRKDIHVEIHGANLEHQEETFRNRIEALRRPLMEEGVLHWPGAYHRDDLGRRMARIDWVV VPSVWWENSPVVIQEAFRFGRPLLCSNIGGMAEHVRDGIDGLHVGVGNTSDWGETLLSAAADMDGWDRFYSTMKTPLPVE RAAERYLAWALENASPALRASTRLAADV
Sequences:
>Translated_428_residues MTGTILVISHGHVDFSAGGAEVAAYQLFAALGKAEAARKVVLLAGHHAGEQSGLITVLRNNEFLWRTGMRDWFKFQSGVR DAVTASFRRFLGGLKPDIVFVHHYAHMGLELLREIRHTCPRAKIVLTLHEFQAICANNGQMVKRGSAELCFGESLQACVG CYPDRSEEDFWLRKHFIRRHFDAVDRFIAPSEFLRQRYISWGLPAERIAVIENGQPEGARLPPRTLPPGGSRNRFAFFGQ VTPFKGVDVLLSALANLPRKQRKDIHVEIHGANLEHQEETFRNRIEALRRPLMEEGVLHWPGAYHRDDLGRRMARIDWVV VPSVWWENSPVVIQEAFRFGRPLLCSNIGGMAEHVRDGIDGLHVGVGNTSDWGETLLSAAADMDGWDRFYSTMKTPLPVE RAAERYLAWALENASPALRASTRLAADV >Mature_427_residues TGTILVISHGHVDFSAGGAEVAAYQLFAALGKAEAARKVVLLAGHHAGEQSGLITVLRNNEFLWRTGMRDWFKFQSGVRD AVTASFRRFLGGLKPDIVFVHHYAHMGLELLREIRHTCPRAKIVLTLHEFQAICANNGQMVKRGSAELCFGESLQACVGC YPDRSEEDFWLRKHFIRRHFDAVDRFIAPSEFLRQRYISWGLPAERIAVIENGQPEGARLPPRTLPPGGSRNRFAFFGQV TPFKGVDVLLSALANLPRKQRKDIHVEIHGANLEHQEETFRNRIEALRRPLMEEGVLHWPGAYHRDDLGRRMARIDWVVV PSVWWENSPVVIQEAFRFGRPLLCSNIGGMAEHVRDGIDGLHVGVGNTSDWGETLLSAAADMDGWDRFYSTMKTPLPVER AAERYLAWALENASPALRASTRLAADV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48116; Mature: 47984
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTILVISHGHVDFSAGGAEVAAYQLFAALGKAEAARKVVLLAGHHAGEQSGLITVLRN CCCEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCEEEEEEC NEFLWRTGMRDWFKFQSGVRDAVTASFRRFLGGLKPDIVFVHHYAHMGLELLREIRHTCP CCEEEECCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCC RAKIVLTLHEFQAICANNGQMVKRGSAELCFGESLQACVGCYPDRSEEDFWLRKHFIRRH CEEEEEEHHHHHHHHCCCCCEEECCCCCEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHH FDAVDRFIAPSEFLRQRYISWGLPAERIAVIENGQPEGARLPPRTLPPGGSRNRFAFFGQ HHHHHHHCCCHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEC VTPFKGVDVLLSALANLPRKQRKDIHVEIHGANLEHQEETFRNRIEALRRPLMEEGVLHW CCCCCCHHHHHHHHHHCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC PGAYHRDDLGRRMARIDWVVVPSVWWENSPVVIQEAFRFGRPLLCSNIGGMAEHVRDGID CCCCCHHHHHHHHHHHCEEEECCEEECCCCHHHHHHHHCCCCCHHHCCCHHHHHHHCCCC GLHVGVGNTSDWGETLLSAAADMDGWDRFYSTMKTPLPVERAAERYLAWALENASPALRA CEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHH STRLAADV HHHHHCCC >Mature Secondary Structure TGTILVISHGHVDFSAGGAEVAAYQLFAALGKAEAARKVVLLAGHHAGEQSGLITVLRN CCEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCEEEEEEC NEFLWRTGMRDWFKFQSGVRDAVTASFRRFLGGLKPDIVFVHHYAHMGLELLREIRHTCP CCEEEECCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCC RAKIVLTLHEFQAICANNGQMVKRGSAELCFGESLQACVGCYPDRSEEDFWLRKHFIRRH CEEEEEEHHHHHHHHCCCCCEEECCCCCEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHH FDAVDRFIAPSEFLRQRYISWGLPAERIAVIENGQPEGARLPPRTLPPGGSRNRFAFFGQ HHHHHHHCCCHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEC VTPFKGVDVLLSALANLPRKQRKDIHVEIHGANLEHQEETFRNRIEALRRPLMEEGVLHW CCCCCCHHHHHHHHHHCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC PGAYHRDDLGRRMARIDWVVVPSVWWENSPVVIQEAFRFGRPLLCSNIGGMAEHVRDGID CCCCCHHHHHHHHHHHCEEEECCEEECCCCHHHHHHHHCCCCCHHHCCCHHHHHHHCCCC GLHVGVGNTSDWGETLLSAAADMDGWDRFYSTMKTPLPVERAAERYLAWALENASPALRA CEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHH STRLAADV HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA