| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is pmi [H]
Identifier: 154247476
GI number: 154247476
Start: 3959876
End: 3961030
Strand: Direct
Name: pmi [H]
Synonym: Xaut_3549
Alternate gene names: 154247476
Gene position: 3959876-3961030 (Clockwise)
Preceding gene: 154247471
Following gene: 154247479
Centisome position: 74.59
GC content: 71.0
Gene sequence:
>1155_bases ATGGCGATGGCCCTTTTGGAAGCGCAGGCCCGGTGGGCGCGTGAGTGGCTGCTCGATGCGGCGTTGCCGCTGTGGTGGAC CGTGGGGGCTGATCCGGCCGGTGGGTTTCACGAGAAGATTGCGCTCGATGGCACGCCGGTAGCCGCGTCCCGCCGCCTGC GGGTCCAGGCGCGGCAGGCTTATGCCTTCATCGAGGGCGGCCGGCTTGGCTGGGATGGGCCGTGGCGGGAGGCGGCGCGG CACGGGCTCGACTTCCTGCTCGCCCATTACCGGCGGCCCGACGGACTGTTCCGCACCCTGGTCGCACCCGATGGCCGGCC CCTCGACGAGACGGCGGACCTCTACGACCAGGCCTTTGTGCTGTTCGCGCTGGCTCAAGCCCACACCGCCGGCCTTGGTG GCGATGAACTCATCGCGACCGCGCGGGCCTTGGCGACGCAGCTTCAGGCCGAGCGCGGCAATCCCGTCGGCGGTTTCGAG GAGGCGAGCCCGCGCGTGCTGCCGCTGCGCTCCAACCCGCACATGCATCTGCTGGAAGCCAACCTCGCCTGGGTGGAGGC CGGCGTCGCGGAGCCCTTCGCGGACGTGGCGCGCGGCATCGTCGCCCTGGCAGCGACGCGACTGATCGACCCGCAGACCG GCGCCATCGGCGAATATTATGACGGCGAGTGGCGCTTCGCCGCCGGCGAATCGGGCGGGGTGCGCGAGCCAGGCCACCAG TTCGAATGGGCCTATCTGCTCGATCATGTCGGCCCGGTGCTGGGGCTGGACCATCGGGCGGCAAGCCGGCGCATGTACGG GTTTGGCGCGCGCTTCGGCATCGATCCGGTGCGCAAGGCCGCTGTGTTCGCACTCGATGCGTCTGGTCAGGTGAGCGACC CGAGGGCGCGGCTCTGGGCGCAGACGGAGCGCCTGCGCACCGCCCTGATCTTCGCCGCAGCCGAGAGCGATGCCGCAATC CGCGCCGACTATGTGGCCGCGGCCGAGGAGGCCTTCGCGGCGCTGCAGGCGTATCTCGATGTTCCGGTGCGGGGCCTGTG GCACGACCAGTGGCTGGCCGATGGCAGCTTCGTGGAGGAGGCTGCGCCTGCCTCCTCCTTCTACCACATCCTCTCCGCCC TGGCGGTGCTGCTGAAGGCGGGCGGGGCGGCCTGA
Upstream 100 bases:
>100_bases GCTTGCGGCACATTGTCGGCCGGCATCTCCTTTGGCCGAACCGCCTTCGCGTTGTGATGGGCGCCGGGCTAATGTGCCCC CACCATTGAGGTATGGGGTA
Downstream 100 bases:
>100_bases GTGGGGGCCGCCGGGCCCACGCCCGTCGTAATCCCGCCGGCGCGCCGCTCAGGCGCGCTGGTAGATGTCCTCGAAGCGGT GGATATCATCCTCGCCGAGA
Product: mannose-6-phosphate isomerase
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MAMALLEAQARWAREWLLDAALPLWWTVGADPAGGFHEKIALDGTPVAASRRLRVQARQAYAFIEGGRLGWDGPWREAAR HGLDFLLAHYRRPDGLFRTLVAPDGRPLDETADLYDQAFVLFALAQAHTAGLGGDELIATARALATQLQAERGNPVGGFE EASPRVLPLRSNPHMHLLEANLAWVEAGVAEPFADVARGIVALAATRLIDPQTGAIGEYYDGEWRFAAGESGGVREPGHQ FEWAYLLDHVGPVLGLDHRAASRRMYGFGARFGIDPVRKAAVFALDASGQVSDPRARLWAQTERLRTALIFAAAESDAAI RADYVAAAEEAFAALQAYLDVPVRGLWHDQWLADGSFVEEAAPASSFYHILSALAVLLKAGGAA
Sequences:
>Translated_384_residues MAMALLEAQARWAREWLLDAALPLWWTVGADPAGGFHEKIALDGTPVAASRRLRVQARQAYAFIEGGRLGWDGPWREAAR HGLDFLLAHYRRPDGLFRTLVAPDGRPLDETADLYDQAFVLFALAQAHTAGLGGDELIATARALATQLQAERGNPVGGFE EASPRVLPLRSNPHMHLLEANLAWVEAGVAEPFADVARGIVALAATRLIDPQTGAIGEYYDGEWRFAAGESGGVREPGHQ FEWAYLLDHVGPVLGLDHRAASRRMYGFGARFGIDPVRKAAVFALDASGQVSDPRARLWAQTERLRTALIFAAAESDAAI RADYVAAAEEAFAALQAYLDVPVRGLWHDQWLADGSFVEEAAPASSFYHILSALAVLLKAGGAA >Mature_383_residues AMALLEAQARWAREWLLDAALPLWWTVGADPAGGFHEKIALDGTPVAASRRLRVQARQAYAFIEGGRLGWDGPWREAARH GLDFLLAHYRRPDGLFRTLVAPDGRPLDETADLYDQAFVLFALAQAHTAGLGGDELIATARALATQLQAERGNPVGGFEE ASPRVLPLRSNPHMHLLEANLAWVEAGVAEPFADVARGIVALAATRLIDPQTGAIGEYYDGEWRFAAGESGGVREPGHQF EWAYLLDHVGPVLGLDHRAASRRMYGFGARFGIDPVRKAAVFALDASGQVSDPRARLWAQTERLRTALIFAAAESDAAIR ADYVAAAEEAFAALQAYLDVPVRGLWHDQWLADGSFVEEAAPASSFYHILSALAVLLKAGGAA
Specific function: Unknown
COG id: COG2942
COG function: function code G; N-acyl-D-glucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-acylglucosamine 2-epimerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010819 [H]
Pfam domain/function: PF07221 GlcNAc_2-epim [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 41534; Mature: 41403
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00024 HEMOPEXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMALLEAQARWAREWLLDAALPLWWTVGADPAGGFHEKIALDGTPVAASRRLRVQARQA CCHHHHHHHHHHHHHHHHHHHCHHEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH YAFIEGGRLGWDGPWREAARHGLDFLLAHYRRPDGLFRTLVAPDGRPLDETADLYDQAFV EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHH LFALAQAHTAGLGGDELIATARALATQLQAERGNPVGGFEEASPRVLPLRSNPHMHLLEA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEEC NLAWVEAGVAEPFADVARGIVALAATRLIDPQTGAIGEYYDGEWRFAAGESGGVREPGHQ CHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC FEWAYLLDHVGPVLGLDHRAASRRMYGFGARFGIDPVRKAAVFALDASGQVSDPRARLWA HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHEEEEECCCCCCCCHHHHHHH QTERLRTALIFAAAESDAAIRADYVAAAEEAFAALQAYLDVPVRGLWHDQWLADGSFVEE HHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHH AAPASSFYHILSALAVLLKAGGAA HCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AMALLEAQARWAREWLLDAALPLWWTVGADPAGGFHEKIALDGTPVAASRRLRVQARQA CHHHHHHHHHHHHHHHHHHHCHHEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH YAFIEGGRLGWDGPWREAARHGLDFLLAHYRRPDGLFRTLVAPDGRPLDETADLYDQAFV EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHH LFALAQAHTAGLGGDELIATARALATQLQAERGNPVGGFEEASPRVLPLRSNPHMHLLEA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEEC NLAWVEAGVAEPFADVARGIVALAATRLIDPQTGAIGEYYDGEWRFAAGESGGVREPGHQ CHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC FEWAYLLDHVGPVLGLDHRAASRRMYGFGARFGIDPVRKAAVFALDASGQVSDPRARLWA HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHEEEEECCCCCCCCHHHHHHH QTERLRTALIFAAAESDAAIRADYVAAAEEAFAALQAYLDVPVRGLWHDQWLADGSFVEE HHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHH AAPASSFYHILSALAVLLKAGGAA HCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1452036; 11481430 [H]