| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is sam [H]
Identifier: 154247471
GI number: 154247471
Start: 3955912
End: 3956916
Strand: Direct
Name: sam [H]
Synonym: Xaut_3544
Alternate gene names: 154247471
Gene position: 3955912-3956916 (Clockwise)
Preceding gene: 154247470
Following gene: 154247476
Centisome position: 74.51
GC content: 70.05
Gene sequence:
>1005_bases ATGGAGCCGCCTTGTTCGGATCTGCCCCAGATGAATGTCCCGGCCGGAATCGGCCTGCAAATCGCCGCCACCTTCTTCTT CGCCGTCATGTCCGCGCTCGTGCGGATGGTGGCCGACGAGGTGCCGAGTGGCGAGATCGTCTTCGCCCGCAGCTTCATCG GGCTCCTGCCCGTGGTGGTCTGGCTCGCCTGGAGCGGGCGAATGACCGGCGCCCTCGTCACCCGGCAGCCGTTCGGCCAC GTGGTGCGGGGCCTCGTAGGCGTGAGCGCCATGTGGCTCAGCTTTGCCGCGCTGGCCTTCATCCCGCTGGCGGAGGCGGT GGCCTTTTCCTATGCCACGCCTCTGGTGGCGGTGGTGCTGGCGGCGGTGCTGCTGGGCGAGCGGGTGCCGGCCTATCGCT GGCTCGTTCTTGCCATTGGCATGGGTGGCATCGTGCTCATGCTGTGGCCGTCGTTTTCCCACGCCTCGGTGGGGTCGGGG CCGGGACCGCTGATCGGCGCGGGACTGGCGCTGGCCGGCGCGGTGGGGGCGGGCTTCGCCATTACCCAGGTGCGCCATCT CACCCGGACCGAGACCAGTGAGGCCATTGTCTTCTACTTCTCGCTGGTGGCTTCCGTGGCGGGCCTCGCCACGCTGCCGC TCGGCTGGGTGATGCCGGACGGGCGGGTCGCGCTCATCCTCGCCGGCATGGGGCTGGCGGGCGGCATCGGGCAGATCTGC GTGACATCGGCCATCCGCCATGCTCCGGCGTCGGTGGTCGCACCGCTCAATTATGCCACGCTGATATGGGCCACCGTGCT CGGCATCATCCTGTTCGGGGAATGGCCGGCGCCCCTTGTGATCGCGGGCGCGATGGTGGTGATCGTGGCCGGGCTGGTCC TGATCTGGCGCGAGCGCAGGCCGGCTCCGCGGATCGTGGCGTCGCGGCCTGAACCTCCGGTCGGGGGCTGCGCTTCTGCA GACGACCCGGGGGAGGCGCCCCCCGTGCAGGACGATGCTGCGTGA
Upstream 100 bases:
>100_bases CTTTGAGACAGGACCCGGTCGCGGGCCGAGCCCGGCGCGGAACTAAAGTCTAAGCCCTGCGGCAGATGCATGCCGCACGC CTTCGGACCGCGCTATAGGG
Downstream 100 bases:
>100_bases ATTGGCGGCGTAAATTGGCGGCGTGAGCTTCAGGCCGGTGAAAAAAGCGGGAGCGCGGTCAGCGCTCCACGAATGCTTTT TCGATGACGTAGTGGCCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MEPPCSDLPQMNVPAGIGLQIAATFFFAVMSALVRMVADEVPSGEIVFARSFIGLLPVVVWLAWSGRMTGALVTRQPFGH VVRGLVGVSAMWLSFAALAFIPLAEAVAFSYATPLVAVVLAAVLLGERVPAYRWLVLAIGMGGIVLMLWPSFSHASVGSG PGPLIGAGLALAGAVGAGFAITQVRHLTRTETSEAIVFYFSLVASVAGLATLPLGWVMPDGRVALILAGMGLAGGIGQIC VTSAIRHAPASVVAPLNYATLIWATVLGIILFGEWPAPLVIAGAMVVIVAGLVLIWRERRPAPRIVASRPEPPVGGCASA DDPGEAPPVQDDAA
Sequences:
>Translated_334_residues MEPPCSDLPQMNVPAGIGLQIAATFFFAVMSALVRMVADEVPSGEIVFARSFIGLLPVVVWLAWSGRMTGALVTRQPFGH VVRGLVGVSAMWLSFAALAFIPLAEAVAFSYATPLVAVVLAAVLLGERVPAYRWLVLAIGMGGIVLMLWPSFSHASVGSG PGPLIGAGLALAGAVGAGFAITQVRHLTRTETSEAIVFYFSLVASVAGLATLPLGWVMPDGRVALILAGMGLAGGIGQIC VTSAIRHAPASVVAPLNYATLIWATVLGIILFGEWPAPLVIAGAMVVIVAGLVLIWRERRPAPRIVASRPEPPVGGCASA DDPGEAPPVQDDAA >Mature_334_residues MEPPCSDLPQMNVPAGIGLQIAATFFFAVMSALVRMVADEVPSGEIVFARSFIGLLPVVVWLAWSGRMTGALVTRQPFGH VVRGLVGVSAMWLSFAALAFIPLAEAVAFSYATPLVAVVLAAVLLGERVPAYRWLVLAIGMGGIVLMLWPSFSHASVGSG PGPLIGAGLALAGAVGAGFAITQVRHLTRTETSEAIVFYFSLVASVAGLATLPLGWVMPDGRVALILAGMGLAGGIGQIC VTSAIRHAPASVVAPLNYATLIWATVLGIILFGEWPAPLVIAGAMVVIVAGLVLIWRERRPAPRIVASRPEPPVGGCASA DDPGEAPPVQDDAA
Specific function: Transports S-adenosylmethionine [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
Organism=Homo sapiens, GI197927233, Length=307, Percent_Identity=28.3387622149837, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI23397492, Length=306, Percent_Identity=28.1045751633987, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6323909, Length=312, Percent_Identity=23.0769230769231, Blast_Score=70, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6324991, Length=331, Percent_Identity=22.9607250755287, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 34468; Mature: 34468
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPPCSDLPQMNVPAGIGLQIAATFFFAVMSALVRMVADEVPSGEIVFARSFIGLLPVVV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHH WLAWSGRMTGALVTRQPFGHVVRGLVGVSAMWLSFAALAFIPLAEAVAFSYATPLVAVVL HHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVLLGERVPAYRWLVLAIGMGGIVLMLWPSFSHASVGSGPGPLIGAGLALAGAVGAGFA HHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHH ITQVRHLTRTETSEAIVFYFSLVASVAGLATLPLGWVMPDGRVALILAGMGLAGGIGQIC HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCCCHHHHH VTSAIRHAPASVVAPLNYATLIWATVLGIILFGEWPAPLVIAGAMVVIVAGLVLIWRERR HHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC PAPRIVASRPEPPVGGCASADDPGEAPPVQDDAA CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEPPCSDLPQMNVPAGIGLQIAATFFFAVMSALVRMVADEVPSGEIVFARSFIGLLPVVV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHH WLAWSGRMTGALVTRQPFGHVVRGLVGVSAMWLSFAALAFIPLAEAVAFSYATPLVAVVL HHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVLLGERVPAYRWLVLAIGMGGIVLMLWPSFSHASVGSGPGPLIGAGLALAGAVGAGFA HHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHH ITQVRHLTRTETSEAIVFYFSLVASVAGLATLPLGWVMPDGRVALILAGMGLAGGIGQIC HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCCCHHHHH VTSAIRHAPASVVAPLNYATLIWATVLGIILFGEWPAPLVIAGAMVVIVAGLVLIWRERR HHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC PAPRIVASRPEPPVGGCASADDPGEAPPVQDDAA CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA