| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247463
Identifier: 154247463
GI number: 154247463
Start: 3945421
End: 3946389
Strand: Reverse
Name: 154247463
Synonym: Xaut_3535
Alternate gene names: NA
Gene position: 3946389-3945421 (Counterclockwise)
Preceding gene: 154247464
Following gene: 154247462
Centisome position: 74.33
GC content: 72.03
Gene sequence:
>969_bases GTGCGTGCCCCCGCGCGGCTTCATCTTGGCTTTCTCGATCTGGGCGGCGCCGTGGGGCGGCGCTTCGGCAGCCTCGGCAT GGCCATCGAGCGGCCGGTGACGGAAGTCACGGTCACTCGCGCAGCCTCGGATGCCGAAAGCGGCCCGGATGCGGCTCGCG CCGCCCGCGCCCGTGACGCGGTGCGCGCCGCCCTCGGCATCAGCCAGGCCTTCGGCGTGGCGGTGGATTCCGCCCTGCCC GCCCATAACGGGCTCGGTTCCGGCACCCAGCTGGCGCTGGCCGTGGGCGTGGCGGTGGCGCGCCTCTCCGGCCGTGATCT GTCCTCCCGCGAAGTCGCGACCCTGCTCGGGCGCGGCCGGCGCTCAGCCATCGGCATGGAAGCGTTCGAGGCCGGCGGGG TCATTCTCGACGGCGGCAAAGCCATGGCCAATGGCGGCGGCCCGGCACCCACCGGGCCGGGCGCGCCCCCGCCCCTCCTC GCCCGCCTGCCCGTGCCGGACAGCTGGCGCATCATCCTCGTCTACGACCGGGCGCGGGAGGGCCTCTCGGGCGAGGCTGA AATGAAGGCCATGGCGACGCTGCCGCCGTTTCCGCCGGAGCGCGCCGCCCATTTCTGCCACTTGATGCTGCTGAAGGCCC TGCCCGCCCTCGCGGAGGGTGATGCAACTTCGTTCGGCACGGTGATCGGCGAATGGCAGCGGGCGCTGGGCGACCATTAT GCCGCAGCGCAGGGCGGTGCCCGATTCCTCAGCGCCGACGTGGCCGCCGCCATCACGCTATTGGAGGAGGAAGGCGTTCC GGGCGTCGGCCAAAGCTCTTGGGGACCCACGGGTTTCGCCATCGTGGGCGACCCGGCCGAGGCCGAGGTTCGGCTCGACA CCTTGCGCCGGCGCTTCGCATCGTCCACAAACCTCTTCTTTGATTGCGTGCGCGGTAACAATCAGGGCGCCGGTCTCGTC GCCCTGTAG
Upstream 100 bases:
>100_bases GCTGGCCGAGCATGCAGCGCGGCTGAAAGCCGCCCTGGCCGGCTGAGCGCGGCGCGTGACGCTTTCCCCCTTGGACCTGA CACACGCGGCGGGGGTCACG
Downstream 100 bases:
>100_bases GGTTCTCTGCTGCGGGCCAAAAACGAAAAACACAAGGAGGACGGCGCGGCGCCCTGGAGCACCCGCCGATTGGCTTGCCC CGCAAGCGCATCGGATGGTG
Product: beta-ribofuranosylaminobenzene 5'-phosphate synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MRAPARLHLGFLDLGGAVGRRFGSLGMAIERPVTEVTVTRAASDAESGPDAARAARARDAVRAALGISQAFGVAVDSALP AHNGLGSGTQLALAVGVAVARLSGRDLSSREVATLLGRGRRSAIGMEAFEAGGVILDGGKAMANGGGPAPTGPGAPPPLL ARLPVPDSWRIILVYDRAREGLSGEAEMKAMATLPPFPPERAAHFCHLMLLKALPALAEGDATSFGTVIGEWQRALGDHY AAAQGGARFLSADVAAAITLLEEEGVPGVGQSSWGPTGFAIVGDPAEAEVRLDTLRRRFASSTNLFFDCVRGNNQGAGLV AL
Sequences:
>Translated_322_residues MRAPARLHLGFLDLGGAVGRRFGSLGMAIERPVTEVTVTRAASDAESGPDAARAARARDAVRAALGISQAFGVAVDSALP AHNGLGSGTQLALAVGVAVARLSGRDLSSREVATLLGRGRRSAIGMEAFEAGGVILDGGKAMANGGGPAPTGPGAPPPLL ARLPVPDSWRIILVYDRAREGLSGEAEMKAMATLPPFPPERAAHFCHLMLLKALPALAEGDATSFGTVIGEWQRALGDHY AAAQGGARFLSADVAAAITLLEEEGVPGVGQSSWGPTGFAIVGDPAEAEVRLDTLRRRFASSTNLFFDCVRGNNQGAGLV AL >Mature_322_residues MRAPARLHLGFLDLGGAVGRRFGSLGMAIERPVTEVTVTRAASDAESGPDAARAARARDAVRAALGISQAFGVAVDSALP AHNGLGSGTQLALAVGVAVARLSGRDLSSREVATLLGRGRRSAIGMEAFEAGGVILDGGKAMANGGGPAPTGPGAPPPLL ARLPVPDSWRIILVYDRAREGLSGEAEMKAMATLPPFPPERAAHFCHLMLLKALPALAEGDATSFGTVIGEWQRALGDHY AAAQGGARFLSADVAAAITLLEEEGVPGVGQSSWGPTGFAIVGDPAEAEVRLDTLRRRFASSTNLFFDCVRGNNQGAGLV AL
Specific function: Unknown
COG id: COG1907
COG function: function code R; Predicted archaeal sugar kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1427 and M.thermoautotrophicum MTH830 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004422 - InterPro: IPR006204 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF00288 GHMP_kinases_N [H]
EC number: NA
Molecular weight: Translated: 32987; Mature: 32987
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAPARLHLGFLDLGGAVGRRFGSLGMAIERPVTEVTVTRAASDAESGPDAARAARARDA CCCCCEEEEEHHHHCHHHHHHHHHCCCHHHCCCHHEEEECCCCCCCCCCHHHHHHHHHHH VRAALGISQAFGVAVDSALPAHNGLGSGTQLALAVGVAVARLSGRDLSSREVATLLGRGR HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC RSAIGMEAFEAGGVILDGGKAMANGGGPAPTGPGAPPPLLARLPVPDSWRIILVYDRARE CHHCCHHHHHCCCEEEECCEEECCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCC GLSGEAEMKAMATLPPFPPERAAHFCHLMLLKALPALAEGDATSFGTVIGEWQRALGDHY CCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH AAAQGGARFLSADVAAAITLLEEEGVPGVGQSSWGPTGFAIVGDPAEAEVRLDTLRRRFA HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHC SSTNLFFDCVRGNNQGAGLVAL CCCCEEEEEECCCCCCCEEEEC >Mature Secondary Structure MRAPARLHLGFLDLGGAVGRRFGSLGMAIERPVTEVTVTRAASDAESGPDAARAARARDA CCCCCEEEEEHHHHCHHHHHHHHHCCCHHHCCCHHEEEECCCCCCCCCCHHHHHHHHHHH VRAALGISQAFGVAVDSALPAHNGLGSGTQLALAVGVAVARLSGRDLSSREVATLLGRGR HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC RSAIGMEAFEAGGVILDGGKAMANGGGPAPTGPGAPPPLLARLPVPDSWRIILVYDRARE CHHCCHHHHHCCCEEEECCEEECCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCC GLSGEAEMKAMATLPPFPPERAAHFCHLMLLKALPALAEGDATSFGTVIGEWQRALGDHY CCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH AAAQGGARFLSADVAAAITLLEEEGVPGVGQSSWGPTGFAIVGDPAEAEVRLDTLRRRFA HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHC SSTNLFFDCVRGNNQGAGLVAL CCCCEEEEEECCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]