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The map label for this gene is ycfF [C]

Identifier: 154247464

GI number: 154247464

Start: 3946444

End: 3946878

Strand: Reverse

Name: ycfF [C]

Synonym: Xaut_3536

Alternate gene names: 154247464

Gene position: 3946878-3946444 (Counterclockwise)

Preceding gene: 154247465

Following gene: 154247463

Centisome position: 74.34

GC content: 64.6

Gene sequence:

>435_bases
ATGACCGCAACGCCGGCTTACGACCCCAGCAACATCTTCGCCAAAATCCTGCGGGGCGAGTTGCCGGCGCACAAGGTCTA
TGAGGACGACAAGGCCGTCGCCTTCCTCGACATCATGCCTCGCGCGCCGGGCCATACCCTCGTCATTCCCAAGAATCCTG
CCCGCAACATCCTCGATATCGACCCCGAGGACCTCGCCTATGTGGCGAAGATCGCCAAGAAGGTGGCCATCGCCGCCAAG
GCGGTGTTTGCGGCCGATGGCGTCACCGTGCAGCAATTCAACGAGGAAGCTGGCGGCCAGGTGGTGTTCCACCTCCATGT
CCACGTCATCCCGCGCCACGCTGGGCAAGCCATGAAGCCGGCCGCGAGCGTCATGGAGAAGCCCGAGGTGCTGGCCGAGC
ATGCAGCGCGGCTGAAAGCCGCCCTGGCCGGCTGA

Upstream 100 bases:

>100_bases
CCGCTTCGGGTAAGGGGGACGGGTCCGCCCGGCGGCACCACGCCCCCTTGACCCTCTGCCCTCGCCCTGCAATCTCCTCC
CCCGGATACGGAGGAACCCC

Downstream 100 bases:

>100_bases
GCGCGGCGCGTGACGCTTTCCCCCTTGGACCTGACACACGCGGCGGGGGTCACGGTGCGTGCCCCCGCGCGGCTTCATCT
TGGCTTTCTCGATCTGGGCG

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTATPAYDPSNIFAKILRGELPAHKVYEDDKAVAFLDIMPRAPGHTLVIPKNPARNILDIDPEDLAYVAKIAKKVAIAAK
AVFAADGVTVQQFNEEAGGQVVFHLHVHVIPRHAGQAMKPAASVMEKPEVLAEHAARLKAALAG

Sequences:

>Translated_144_residues
MTATPAYDPSNIFAKILRGELPAHKVYEDDKAVAFLDIMPRAPGHTLVIPKNPARNILDIDPEDLAYVAKIAKKVAIAAK
AVFAADGVTVQQFNEEAGGQVVFHLHVHVIPRHAGQAMKPAASVMEKPEVLAEHAARLKAALAG
>Mature_143_residues
TATPAYDPSNIFAKILRGELPAHKVYEDDKAVAFLDIMPRAPGHTLVIPKNPARNILDIDPEDLAYVAKIAKKVAIAAKA
VFAADGVTVQQFNEEAGGQVVFHLHVHVIPRHAGQAMKPAASVMEKPEVLAEHAARLKAALAG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI14211923, Length=111, Percent_Identity=39.6396396396396, Blast_Score=74, Evalue=5e-14,
Organism=Homo sapiens, GI4885413, Length=112, Percent_Identity=39.2857142857143, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1787346, Length=101, Percent_Identity=36.6336633663366, Blast_Score=62, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17506713, Length=101, Percent_Identity=40.5940594059406, Blast_Score=76, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6320078, Length=112, Percent_Identity=40.1785714285714, Blast_Score=74, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28574010, Length=121, Percent_Identity=39.6694214876033, Blast_Score=81, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24581222, Length=121, Percent_Identity=39.6694214876033, Blast_Score=80, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 15416; Mature: 15285

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATPAYDPSNIFAKILRGELPAHKVYEDDKAVAFLDIMPRAPGHTLVIPKNPARNILDI
CCCCCCCCHHHHHHHHHHCCCCCCHHCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCC
DPEDLAYVAKIAKKVAIAAKAVFAADGVTVQQFNEEAGGQVVFHLHVHVIPRHAGQAMKP
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEEEEEEEECCCCCCCCH
AASVMEKPEVLAEHAARLKAALAG
HHHHHHCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TATPAYDPSNIFAKILRGELPAHKVYEDDKAVAFLDIMPRAPGHTLVIPKNPARNILDI
CCCCCCCHHHHHHHHHHCCCCCCHHCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCC
DPEDLAYVAKIAKKVAIAAKAVFAADGVTVQQFNEEAGGQVVFHLHVHVIPRHAGQAMKP
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEEEEEEEECCCCCCCCH
AASVMEKPEVLAEHAARLKAALAG
HHHHHHCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978084; 9403685 [H]