| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247405
Identifier: 154247405
GI number: 154247405
Start: 3871037
End: 3871267
Strand: Reverse
Name: 154247405
Synonym: Xaut_3477
Alternate gene names: NA
Gene position: 3871267-3871037 (Counterclockwise)
Preceding gene: 154247406
Following gene: 154247401
Centisome position: 72.92
GC content: 65.8
Gene sequence:
>231_bases ATGTCGCATAGCACTGCTGAAAAGCTCGTCTACATGGCGAACCAGATCGCCACCGCCTTCTCGGCGCAGAAGCACGCGGA GGCCGTGGAGGCCACGCGCATCCACATCCAGAAGTTCTGGGACCCGCGCATGCGCTCCAAGATCGCCGAGCACATCGCCC ATGGCGGCGAGGGCCTCTCGCCCATCGCCAGGGAAGCGCTGGAAGGCCTCCAGGCGGCCAAAGCCGCCTGA
Upstream 100 bases:
>100_bases GCGGCGGGCATCACCCTGTGCGCCATCGTGCGGCAGGATGGCTTCGAGATCTTCACCCATCCCGGGCGCATCGCCCTCCC CTCACCGGAACGGCAGAACC
Downstream 100 bases:
>100_bases CCAGCCCACGCGGCGCGTGAGCGAGAAAACCTACGGATACGGCCAAGGCCGCCTGATCACACCATGTCCCGCGGGGCGAG GGCGCAGGCCATGCGCCCCT
Product: putative NAD-dependent formate dehydrogenase delta subunit protein
Products: CO2; NADH
Alternate protein names: Formate Dehydrogenase Delta Subunit; NAD-Dependent Formate Dehydrogenase Delta Subunit Protein; NAD-Dependent Formate Dehydrogenase; Formate Dehydrogenase Protein Delta Subunit
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MSHSTAEKLVYMANQIATAFSAQKHAEAVEATRIHIQKFWDPRMRSKIAEHIAHGGEGLSPIAREALEGLQAAKAA
Sequences:
>Translated_76_residues MSHSTAEKLVYMANQIATAFSAQKHAEAVEATRIHIQKFWDPRMRSKIAEHIAHGGEGLSPIAREALEGLQAAKAA >Mature_75_residues SHSTAEKLVYMANQIATAFSAQKHAEAVEATRIHIQKFWDPRMRSKIAEHIAHGGEGLSPIAREALEGLQAAKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.2.1.2
Molecular weight: Translated: 8281; Mature: 8149
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHSTAEKLVYMANQIATAFSAQKHAEAVEATRIHIQKFWDPRMRSKIAEHIAHGGEGLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC PIAREALEGLQAAKAA HHHHHHHHHHHHHCCC >Mature Secondary Structure SHSTAEKLVYMANQIATAFSAQKHAEAVEATRIHIQKFWDPRMRSKIAEHIAHGGEGLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC PIAREALEGLQAAKAA HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: formate; NAD+
Specific reaction: formate + NAD+ = CO2 + NADH
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA