| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247401
Identifier: 154247401
GI number: 154247401
Start: 3866591
End: 3867079
Strand: Reverse
Name: 154247401
Synonym: Xaut_3473
Alternate gene names: NA
Gene position: 3867079-3866591 (Counterclockwise)
Preceding gene: 154247405
Following gene: 154247398
Centisome position: 72.84
GC content: 66.05
Gene sequence:
>489_bases ATGGGCGCGGATCATTCCCACGACGACGGACACGGCAAGATCGACTGGCGCACCCACGGGGTAAAGGTGATCCCCGGCGA TAGCCTCGATCCCAACACTGCCCAGACCCCCGGCATGAACCGGGCCACCGCCATCAACCACGCGCGGGCCGGAGCGGAGA AGATCTGGGCCGGCACGGTGCACATCCATCCGGACGCAAAGACCGGCGCCCACCACCATGGCGACCTGGAGAGCATCATC TACGTGGTGAAGGGCCGCGCGCGCATGCGCTGGGGCGAGCACCTGGAATATGTGGCCGAGGCCGGCCCCGGCGACTTCAT CTTCGTACCGCCCTATGTGCCCCACCAGGAGATCAACGCCTCCCCCGACGAGACTCTCGAATGCGTTCTGGTGCGCTCGG GACAGGATCCGGTGGTGGTGAATCTCGACATCGAGCCGGCCGAGAAGCCGGAGGCGGTGAAGTGGATCGACCCCATCCAC CGCGAATGA
Upstream 100 bases:
>100_bases CCTGAAAAGGGATGCGTTGAGTTGGCGCCGTTCTAGCCCTCGCGCGGCGGCGCGGCAAGGGAATGGGGCCTCAAGGGCCC TCGGCGACAGGGAGGACAAG
Downstream 100 bases:
>100_bases CTTCTGCTAACCACCTACTTTTTCTCACCTTTTCCGGAATTGCGACAGGCCACCCACGAAGCCTGTGGACAAGTTGGAGT GATGCCTGTTGCATTCTGCG
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Domain-Containing Protein; Cupin Domain Protein; Cupin 2 Barrel; Mannose-6-Phosphate Isomerase Protein
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MGADHSHDDGHGKIDWRTHGVKVIPGDSLDPNTAQTPGMNRATAINHARAGAEKIWAGTVHIHPDAKTGAHHHGDLESII YVVKGRARMRWGEHLEYVAEAGPGDFIFVPPYVPHQEINASPDETLECVLVRSGQDPVVVNLDIEPAEKPEAVKWIDPIH RE
Sequences:
>Translated_162_residues MGADHSHDDGHGKIDWRTHGVKVIPGDSLDPNTAQTPGMNRATAINHARAGAEKIWAGTVHIHPDAKTGAHHHGDLESII YVVKGRARMRWGEHLEYVAEAGPGDFIFVPPYVPHQEINASPDETLECVLVRSGQDPVVVNLDIEPAEKPEAVKWIDPIH RE >Mature_161_residues GADHSHDDGHGKIDWRTHGVKVIPGDSLDPNTAQTPGMNRATAINHARAGAEKIWAGTVHIHPDAKTGAHHHGDLESIIY VVKGRARMRWGEHLEYVAEAGPGDFIFVPPYVPHQEINASPDETLECVLVRSGQDPVVVNLDIEPAEKPEAVKWIDPIHR E
Specific function: Unknown
COG id: COG4101
COG function: function code G; Predicted mannose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17797; Mature: 17666
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGADHSHDDGHGKIDWRTHGVKVIPGDSLDPNTAQTPGMNRATAINHARAGAEKIWAGTV CCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEE HIHPDAKTGAHHHGDLESIIYVVKGRARMRWGEHLEYVAEAGPGDFIFVPPYVPHQEINA EECCCCCCCCCCCCCHHHEEEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCC SPDETLECVLVRSGQDPVVVNLDIEPAEKPEAVKWIDPIHRE CCCCCEEEEEEECCCCCEEEEEECCCCCCCCCEECCCCCCCC >Mature Secondary Structure GADHSHDDGHGKIDWRTHGVKVIPGDSLDPNTAQTPGMNRATAINHARAGAEKIWAGTV CCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEE HIHPDAKTGAHHHGDLESIIYVVKGRARMRWGEHLEYVAEAGPGDFIFVPPYVPHQEINA EECCCCCCCCCCCCCHHHEEEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCC SPDETLECVLVRSGQDPVVVNLDIEPAEKPEAVKWIDPIHRE CCCCCEEEEEEECCCCCEEEEEECCCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA