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The map label for this gene is ssuA [H]

Identifier: 154247394

GI number: 154247394

Start: 3856767

End: 3857759

Strand: Direct

Name: ssuA [H]

Synonym: Xaut_3466

Alternate gene names: 154247394

Gene position: 3856767-3857759 (Clockwise)

Preceding gene: 154247393

Following gene: 154247395

Centisome position: 72.65

GC content: 66.47

Gene sequence:

>993_bases
ATGTCCGCCTTCCTGACCCCCTCCCGCCGCCAGTTCCTTGCCCTTGCCGGCGCGGGCGCCGCCTCCGGCCTGCTGCCGTT
CGCCGCGCATGCCGCGCCCGACACCCGCAACACCGACACGGTGCGCCTGACCTGGGGCTTCCATGGCCTCACCCTCATCG
CCAAGGAGCGCGGCACCTTCGAGAAGGCGTTGGCCGAAAAGGGCATCAAGGTGGAATGGCTCGGACCGTTCCCAAACCAT
GCGCCGACCCTGCAGGCGGTGACCGGCGGCAGCGCGGATTTCGGCTTCGGCGGCTCCACCACCCCCGCGCTGGCGGCCAT
CATCGCCGGCTCGCCGCTGGTGTTCAGCCAGTTCGTGCTCTACGAGCCGCGCACCACCGCCATCATCGCCAAGGACGGCT
CGGGCATCGACACGGTGTCGGACCTGGTGGGCAAGTCGGTGGCGGTGAACCGCTCGGGCCTGGGCGAATTCCTTTTGGTG
GCGGCGCTGGAGAAGAACGGCATCGACCGCTCCAAGGTCAAGTTCGTCTATCTCAACCCGCCGGACGCCGCCCCGGCGCT
TGCCTCCGGCAAGGTGGACGCGTGGTCCATGTGGAGCCCCGGCGTCGATATCGCGCGGCTCGACTACAAGGCCCACGACA
TCTTCCTGGAAGGTCGCGACCTTGAATTCTACATCGATTACAGCTCCTATGTGACCAGCCGCAAGTTCTCGCAGGAGAAT
TCGCAGATCGTCCGCGCCGTGGCCGCCGCCTATGAGGAGGAGGCCAAATGGGTGAATGCCAACACGGTGGAGGCCGAGAC
CATCGTGCAGAAGCGCGCCGGCTATTCCGACGTGATCCGCGACCAGTTCATCGAGCGCCGGCGCACCTACAAGCTCATCC
CGGTCACCGACAAGGCCTTCGTCGCCGACCTGCAGAAGGCGGCGGACTGGCTGGTGGCGCGCAAGATCCTGCCCGAACCC
ATCACCGTGTCGGATCATCTTGCGCAGTTCTGA

Upstream 100 bases:

>100_bases
GGCGCCGGGCCTGCCTGCCGCCACCCGCGCCACTCTCCTCGCCGAGCTCGGCGTCGTCGACGACCTCAAGAGCGCCTGAT
CCCCTTTTGGAAGAGAAGCC

Downstream 100 bases:

>100_bases
TTTCGTGCCCTTCGCCCGGCCCCTTCACTCTGCCCGTTTCAAGTCTTCGAGGACCTTATGAACAAGCCCGTGACCGATGT
GTCCGTCCGCCTCCCGGGGC

Product: aliphatic sulfonate ABC transporter periplasmic ligand-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MSAFLTPSRRQFLALAGAGAASGLLPFAAHAAPDTRNTDTVRLTWGFHGLTLIAKERGTFEKALAEKGIKVEWLGPFPNH
APTLQAVTGGSADFGFGGSTTPALAAIIAGSPLVFSQFVLYEPRTTAIIAKDGSGIDTVSDLVGKSVAVNRSGLGEFLLV
AALEKNGIDRSKVKFVYLNPPDAAPALASGKVDAWSMWSPGVDIARLDYKAHDIFLEGRDLEFYIDYSSYVTSRKFSQEN
SQIVRAVAAAYEEEAKWVNANTVEAETIVQKRAGYSDVIRDQFIERRRTYKLIPVTDKAFVADLQKAADWLVARKILPEP
ITVSDHLAQF

Sequences:

>Translated_330_residues
MSAFLTPSRRQFLALAGAGAASGLLPFAAHAAPDTRNTDTVRLTWGFHGLTLIAKERGTFEKALAEKGIKVEWLGPFPNH
APTLQAVTGGSADFGFGGSTTPALAAIIAGSPLVFSQFVLYEPRTTAIIAKDGSGIDTVSDLVGKSVAVNRSGLGEFLLV
AALEKNGIDRSKVKFVYLNPPDAAPALASGKVDAWSMWSPGVDIARLDYKAHDIFLEGRDLEFYIDYSSYVTSRKFSQEN
SQIVRAVAAAYEEEAKWVNANTVEAETIVQKRAGYSDVIRDQFIERRRTYKLIPVTDKAFVADLQKAADWLVARKILPEP
ITVSDHLAQF
>Mature_329_residues
SAFLTPSRRQFLALAGAGAASGLLPFAAHAAPDTRNTDTVRLTWGFHGLTLIAKERGTFEKALAEKGIKVEWLGPFPNHA
PTLQAVTGGSADFGFGGSTTPALAAIIAGSPLVFSQFVLYEPRTTAIIAKDGSGIDTVSDLVGKSVAVNRSGLGEFLLVA
ALEKNGIDRSKVKFVYLNPPDAAPALASGKVDAWSMWSPGVDIARLDYKAHDIFLEGRDLEFYIDYSSYVTSRKFSQENS
QIVRAVAAAYEEEAKWVNANTVEAETIVQKRAGYSDVIRDQFIERRRTYKLIPVTDKAFVADLQKAADWLVARKILPEPI
TVSDHLAQF

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]

Homologues:

Organism=Escherichia coli, GI87081803, Length=313, Percent_Identity=27.1565495207668, Blast_Score=101, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010067
- InterPro:   IPR015168
- InterPro:   IPR001638 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 35810; Mature: 35679

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAFLTPSRRQFLALAGAGAASGLLPFAAHAAPDTRNTDTVRLTWGFHGLTLIAKERGTF
CCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCH
EKALAEKGIKVEWLGPFPNHAPTLQAVTGGSADFGFGGSTTPALAAIIAGSPLVFSQFVL
HHHHHHCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHEEE
YEPRTTAIIAKDGSGIDTVSDLVGKSVAVNRSGLGEFLLVAALEKNGIDRSKVKFVYLNP
ECCCCEEEEEECCCCCHHHHHHHCCEEEECCCCCCCEEEEEEHHHCCCCCHHEEEEEECC
PDAAPALASGKVDAWSMWSPGVDIARLDYKAHDIFLEGRDLEFYIDYSSYVTSRKFSQEN
CCCCCCHHCCCCCEEECCCCCCCEEEEEEEEEEEEEECCCEEEEEEHHHHHHHHHHCHHH
SQIVRAVAAAYEEEAKWVNANTVEAETIVQKRAGYSDVIRDQFIERRRTYKLIPVTDKAF
HHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCEEEEEECCHHH
VADLQKAADWLVARKILPEPITVSDHLAQF
HHHHHHHHHHHHHHHHCCCCCCCHHHHHCC
>Mature Secondary Structure 
SAFLTPSRRQFLALAGAGAASGLLPFAAHAAPDTRNTDTVRLTWGFHGLTLIAKERGTF
CCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCH
EKALAEKGIKVEWLGPFPNHAPTLQAVTGGSADFGFGGSTTPALAAIIAGSPLVFSQFVL
HHHHHHCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHEEE
YEPRTTAIIAKDGSGIDTVSDLVGKSVAVNRSGLGEFLLVAALEKNGIDRSKVKFVYLNP
ECCCCEEEEEECCCCCHHHHHHHCCEEEECCCCCCCEEEEEEHHHCCCCCHHEEEEEECC
PDAAPALASGKVDAWSMWSPGVDIARLDYKAHDIFLEGRDLEFYIDYSSYVTSRKFSQEN
CCCCCCHHCCCCCEEECCCCCCCEEEEEEEEEEEEEECCCEEEEEEHHHHHHHHHHCHHH
SQIVRAVAAAYEEEAKWVNANTVEAETIVQKRAGYSDVIRDQFIERRRTYKLIPVTDKAF
HHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCEEEEEECCHHH
VADLQKAADWLVARKILPEPITVSDHLAQF
HHHHHHHHHHHHHHHHCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]