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The map label for this gene is soxC [H]

Identifier: 154247395

GI number: 154247395

Start: 3857817

End: 3859046

Strand: Direct

Name: soxC [H]

Synonym: Xaut_3467

Alternate gene names: 154247395

Gene position: 3857817-3859046 (Clockwise)

Preceding gene: 154247394

Following gene: 154247399

Centisome position: 72.67

GC content: 70.57

Gene sequence:

>1230_bases
ATGAACAAGCCCGTGACCGATGTGTCCGTCCGCCTCCCGGGGCCGCCCGTGGCAGATCCTGCGCCCTGGCGGCGCCTTAT
CGCCCATATCGGGCGCGGCTCGTCCGAGCGCGAGCACCAGCGCATCCTGCCGTTCGAGGCGGTGGACCTTTTGCGCGAGG
CCCGCTTTGGCGCCCTGCGCCTTGCCAAGGAGGGTGGCGGCGCCGGCGCCTCGTTCCGCGAGCTGTATGCGCTGGCGCTG
GAGCTGGCGGCGGCGGATGCCAACGTCGCCCACATCTTCCGCAACCATTTCACCGTGGCCGAGCAGTTCACCCGCATCCC
CACCGATGCGCGCGCCCGCGAATGGCAGCAGCAGGTGCGCGACGGCGCGCTGTTTGGCCTCGCCAGCACGGAAGCCAATG
CCAGCCCCGCCGGCGGCGGCGTACCCACCGACACGGTGCTGTCGCCCGACGGCGACGGCTTCCGTCTCGACGGCGTGAAA
TATTACAGCACCGGCACCCTGTTCGCCGACGCCATGCTGGTGCGCGCGGGCACGAAGGATGGGCGCGTCGCCTCGGTGAT
CATCCCCACCAAGCGCGAGGGGCTGGAGGTGGTGGACGACTGGGACGGCGCCGGCCAGCGCCTCACCGGCTCCGGCACCA
CGCGCTTTCATGGCGTGCGGGTGGAGGCGGACGAGGCCATCTTCGACACCCCGGACCGGGGCTATGGCCTGGCCTATTCC
AACACCCAGGCCCAGCTCTTCCTCACCACCGTGGTGGCGGGCATCGTGCGCGGCGTGCTGGAGGATGCCATCGCGCTGGT
GACACGGCGCAAGCGCAGCTTCTATTACGCGCCCACCCCGAACCCGGTGGACGACCCCTTCCTGCAGCAGACCATCGGCC
AGATCGCGAGCCACGCCTTTGCCGCCGAGGCCATCGTGCTGGCCGCCGCCGATGCCCTTGATCGCGTCAGCCGCGCCCGC
GACCGCAACGAGCCGGCCGATGCGCTTGCCGCCGATGCGGCACGGGCGGCGGCGCAGGCCAAGATCGTGGTGGATGAGCT
GTCCCTGCGCGCCGGCACGCTATTGTTCGAGGTGGGCGGGGCCTCCGCCACCGAGCGCAGCGTCAACCTTGACCGCCACT
GGCGTAACGCCCGCACCATCGCCGCCCACAATCCGGCGAGCTACAAGGCGCAGGCCATCGGCGCCCTTCTGGTGAAGGGC
ACACCCCTGCCGTCGAAGGGGTTTTTCTGA

Upstream 100 bases:

>100_bases
GCCCGAACCCATCACCGTGTCGGATCATCTTGCGCAGTTCTGATTTCGTGCCCTTCGCCCGGCCCCTTCACTCTGCCCGT
TTCAAGTCTTCGAGGACCTT

Downstream 100 bases:

>100_bases
GCGCGCGAGCCGGGAGGGGAGCGACCCCTTCCGGCTCGGCCGTCAATGAAAATCCCGCGATTTCGGCAGCACCCGCACGT
CGCGGGGATGCCGGCGGGGA

Product: acyl-CoA dehydrogenase type 2

Products: NA

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MNKPVTDVSVRLPGPPVADPAPWRRLIAHIGRGSSEREHQRILPFEAVDLLREARFGALRLAKEGGGAGASFRELYALAL
ELAAADANVAHIFRNHFTVAEQFTRIPTDARAREWQQQVRDGALFGLASTEANASPAGGGVPTDTVLSPDGDGFRLDGVK
YYSTGTLFADAMLVRAGTKDGRVASVIIPTKREGLEVVDDWDGAGQRLTGSGTTRFHGVRVEADEAIFDTPDRGYGLAYS
NTQAQLFLTTVVAGIVRGVLEDAIALVTRRKRSFYYAPTPNPVDDPFLQQTIGQIASHAFAAEAIVLAAADALDRVSRAR
DRNEPADALAADAARAAAQAKIVVDELSLRAGTLLFEVGGASATERSVNLDRHWRNARTIAAHNPASYKAQAIGALLVKG
TPLPSKGFF

Sequences:

>Translated_409_residues
MNKPVTDVSVRLPGPPVADPAPWRRLIAHIGRGSSEREHQRILPFEAVDLLREARFGALRLAKEGGGAGASFRELYALAL
ELAAADANVAHIFRNHFTVAEQFTRIPTDARAREWQQQVRDGALFGLASTEANASPAGGGVPTDTVLSPDGDGFRLDGVK
YYSTGTLFADAMLVRAGTKDGRVASVIIPTKREGLEVVDDWDGAGQRLTGSGTTRFHGVRVEADEAIFDTPDRGYGLAYS
NTQAQLFLTTVVAGIVRGVLEDAIALVTRRKRSFYYAPTPNPVDDPFLQQTIGQIASHAFAAEAIVLAAADALDRVSRAR
DRNEPADALAADAARAAAQAKIVVDELSLRAGTLLFEVGGASATERSVNLDRHWRNARTIAAHNPASYKAQAIGALLVKG
TPLPSKGFF
>Mature_409_residues
MNKPVTDVSVRLPGPPVADPAPWRRLIAHIGRGSSEREHQRILPFEAVDLLREARFGALRLAKEGGGAGASFRELYALAL
ELAAADANVAHIFRNHFTVAEQFTRIPTDARAREWQQQVRDGALFGLASTEANASPAGGGVPTDTVLSPDGDGFRLDGVK
YYSTGTLFADAMLVRAGTKDGRVASVIIPTKREGLEVVDDWDGAGQRLTGSGTTRFHGVRVEADEAIFDTPDRGYGLAYS
NTQAQLFLTTVVAGIVRGVLEDAIALVTRRKRSFYYAPTPNPVDDPFLQQTIGQIASHAFAAEAIVLAAADALDRVSRAR
DRNEPADALAADAARAAAQAKIVVDELSLRAGTLLFEVGGASATERSVNLDRHWRNARTIAAHNPASYKAQAIGALLVKG
TPLPSKGFF

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43745; Mature: 43745

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPVTDVSVRLPGPPVADPAPWRRLIAHIGRGSSEREHQRILPFEAVDLLREARFGALR
CCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHCCCCEE
LAKEGGGAGASFRELYALALELAAADANVAHIFRNHFTVAEQFTRIPTDARAREWQQQVR
EECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
DGALFGLASTEANASPAGGGVPTDTVLSPDGDGFRLDGVKYYSTGTLFADAMLVRAGTKD
CCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCEEECCEEEEECCHHHHHHHHHCCCCCC
GRVASVIIPTKREGLEVVDDWDGAGQRLTGSGTTRFHGVRVEADEAIFDTPDRGYGLAYS
CCEEEEEECCCCCCCEEEECCCCCCCEEECCCCCEEEEEEEECCCCEECCCCCCCEEEEC
NTQAQLFLTTVVAGIVRGVLEDAIALVTRRKRSFYYAPTPNPVDDPFLQQTIGQIASHAF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHH
AAEAIVLAAADALDRVSRARDRNEPADALAADAARAAAQAKIVVDELSLRAGTLLFEVGG
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEHHHHHCCCCEEEEEECC
ASATERSVNLDRHWRNARTIAAHNPASYKAQAIGALLVKGTPLPSKGFF
CCCCCCCCCHHHHHCCCCEEEECCCCCHHHHHHEEEEEECCCCCCCCCC
>Mature Secondary Structure
MNKPVTDVSVRLPGPPVADPAPWRRLIAHIGRGSSEREHQRILPFEAVDLLREARFGALR
CCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHCCCCEE
LAKEGGGAGASFRELYALALELAAADANVAHIFRNHFTVAEQFTRIPTDARAREWQQQVR
EECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
DGALFGLASTEANASPAGGGVPTDTVLSPDGDGFRLDGVKYYSTGTLFADAMLVRAGTKD
CCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCEEECCEEEEECCHHHHHHHHHCCCCCC
GRVASVIIPTKREGLEVVDDWDGAGQRLTGSGTTRFHGVRVEADEAIFDTPDRGYGLAYS
CCEEEEEECCCCCCCEEEECCCCCCCEEECCCCCEEEEEEEECCCCEECCCCCCCEEEEC
NTQAQLFLTTVVAGIVRGVLEDAIALVTRRKRSFYYAPTPNPVDDPFLQQTIGQIASHAF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHH
AAEAIVLAAADALDRVSRARDRNEPADALAADAARAAAQAKIVVDELSLRAGTLLFEVGG
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEHHHHHCCCCEEEEEECC
ASATERSVNLDRHWRNARTIAAHNPASYKAQAIGALLVKGTPLPSKGFF
CCCCCCCCCHHHHHCCCCEEEECCCCCHHHHHHEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]