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The map label for this gene is nodV [H]

Identifier: 154247316

GI number: 154247316

Start: 3775521

End: 3777467

Strand: Direct

Name: nodV [H]

Synonym: Xaut_3388

Alternate gene names: 154247316

Gene position: 3775521-3777467 (Clockwise)

Preceding gene: 154247314

Following gene: 154247317

Centisome position: 71.12

GC content: 68.98

Gene sequence:

>1947_bases
GTGACACCGGAGAGATCCAATCGCGGCACGCGCGCAGACGGCTTCGGCCCGGATCTGCCGCATGGGCGCTGGCGCGCCAT
CTGGCTCGCCTGGCGCGGCGTCGCGATCTGCCTCGTGTTGATGGGAGCGGTGGCCCCCGCCCGCGCTGAGACCGCCCGCC
GTCATGTGCTGGTCCTGTTCGAGAACAACCGCCTGTTGCCGGCCAACGTGCTGGGCGACCGGGGCATCACCAGCGCGCTG
GGGGAGGTGGACCGCAGCACCGAGATCAGCACCGAGTTTCTGGATTATCCGCGCTTCAGTGGCGCCGCCTACGTGGGAAC
CATCACGCGCTTCCTGCGTGAGAAATACGCGGTGCGACCGCCCGGCGTCATCATCGTCGCCGGCGACACTGCGCTCGACT
TCGTGCTGAACACCCGGGCCGAGCTTTTTCCGCAGGTGCCGGTGGTCCATGTGGGCGTCGCGAGTTCCTTCCTCGCCTCC
CGCCCGCCTCTGCCTGAAGACGTGGTGGGCGTGCCCTTCGCGCAGGATTTCGCCGGCACCATCGCGCAGGCGTTGAAATG
GCATCCGCAGGCCAAGCATCTGGTCCTGATCACCGGCGCGGCCGAGCGTGATCGGGAATGGGAGCAGGACCTGCGCCGGG
CGGCCGGAGGCTTCGAAGGCCGGGTGAGCATCGAGATGCTTGCAGGCCGCCCCATGGCGGAGGTGTTGAAGCGGGTGGCG
GAGCTGGGTCCCGACACCGTGGTGGCCACGCCCGGGTTTTTCCGCGACGGGGCGGTCAGCATCTACCTTCCGGCGGACTC
GGTGCGGCTGATCGCGCAGGCGGCGACGGCGCCGGTCTACGGCCCCTTCGTCACCTTCATCGGCACCGGTGTCGTGGGCG
GATGGATGACCAGTTTCGAGGCCATGGGCCGCGAGGGCGGGGCCATCGCCAATCGCCTGCTGGACGGGCAGGCGGCTTCG
TCCCTCAGGCTCCCCCAGGTGATGCCGTCCGCGCTTTATGTGGACTGGCGGCAGATCGAGCGCTGGGGCATCGATCCGGA
TGCGGTGCCCGCCGACGCGGTCATCCAGTTCCGCGCGCCCGGGTTCTGGCAGACCTACCGGAAGGAGGCGATGGCGGTTG
CCCTGGCCTTCCTGTTGCAGAGCCTGCTTCTGACCGCCCTGCTGCTTGAGCGCGACCGCCGGCGCCTGGCGCAGTCGAGC
GTGGACCGCCATCGGTTCGAGCTGGCCCATGCATCCCGGCTGGCGGTCGCGGGGGAATTGACTGGTTCCATCGCCCACGA
GATCAACCAGCCGCTGGCCGCCATCCTGAGCAATGCGGCGGCGGCGGAAATGATGCTGGACCGCGGCACCGCGCGGCCCG
GCGAACTGAAGGAGATCCTGGCCGACATCAGGCGTGACGACCTGCGCGCAAGCGAGGTCATCCGCCGGCTGCGGGCGCTG
CTCGCCAAGCACGAGGTGGTGCGCCAGCCCGTCGACCTCAACGACATCCTGGGTGACGTGATCGCCCTGCTGAATGCCGA
GGCCCGCCGCCGGCGCATCGCCCTGAGCGCACGGCCGGTGGGGGAGACAATCACGGTGGTGGGCGACCGCATCCAGCTCC
AGCAGGTGCTCATCAACCTGATCATGAATGCCATGGACGCGCTGGCGGATACTCCCGAGGAGCAGCGCAACATCGTCCTG
TCGCTCGAAGGCTCGGCCACCGACGCGACCATCCGGGTGCGCGACCGTGGACACGGCATTACTGCGGAACACCTGCCGAA
GCTGTTCGACTCCTTCTTCACCACCAAGCGCAAGGGCATCGGCCTCGGCCTGTCCATTGCGCGCACGCTGGTCGAGGCCC
ATGGTGGCACCATCACGGCCGAGAGCGCGCCGGGGGAGGGCGCCACTTTCACCATCCAGCTTCCCCGGGTCGCGCCCGGC
GGCAGCGCCTGGGTTGGGAGATCATGA

Upstream 100 bases:

>100_bases
CCGCAGGTCGCGACCGGAGCGGACAGGCGCCGCCCCTTGCGCCCGCGTGCGAGGTGGCCCCACATGTTCGGCCTGTCGAG
GGCAGGGGTTCGGGGCGGAC

Downstream 100 bases:

>100_bases
GTTCGTCACCTCTGGTCCACGTGGTGGACGACGACGATTCCCTGCGCACCGCCGTGGTGCGACTGCTGACCGCCGCCGGC
CTGGAGGTGCGGGCCTACGC

Product: integral membrane sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 648; Mature: 647

Protein sequence:

>648_residues
MTPERSNRGTRADGFGPDLPHGRWRAIWLAWRGVAICLVLMGAVAPARAETARRHVLVLFENNRLLPANVLGDRGITSAL
GEVDRSTEISTEFLDYPRFSGAAYVGTITRFLREKYAVRPPGVIIVAGDTALDFVLNTRAELFPQVPVVHVGVASSFLAS
RPPLPEDVVGVPFAQDFAGTIAQALKWHPQAKHLVLITGAAERDREWEQDLRRAAGGFEGRVSIEMLAGRPMAEVLKRVA
ELGPDTVVATPGFFRDGAVSIYLPADSVRLIAQAATAPVYGPFVTFIGTGVVGGWMTSFEAMGREGGAIANRLLDGQAAS
SLRLPQVMPSALYVDWRQIERWGIDPDAVPADAVIQFRAPGFWQTYRKEAMAVALAFLLQSLLLTALLLERDRRRLAQSS
VDRHRFELAHASRLAVAGELTGSIAHEINQPLAAILSNAAAAEMMLDRGTARPGELKEILADIRRDDLRASEVIRRLRAL
LAKHEVVRQPVDLNDILGDVIALLNAEARRRRIALSARPVGETITVVGDRIQLQQVLINLIMNAMDALADTPEEQRNIVL
SLEGSATDATIRVRDRGHGITAEHLPKLFDSFFTTKRKGIGLGLSIARTLVEAHGGTITAESAPGEGATFTIQLPRVAPG
GSAWVGRS

Sequences:

>Translated_648_residues
MTPERSNRGTRADGFGPDLPHGRWRAIWLAWRGVAICLVLMGAVAPARAETARRHVLVLFENNRLLPANVLGDRGITSAL
GEVDRSTEISTEFLDYPRFSGAAYVGTITRFLREKYAVRPPGVIIVAGDTALDFVLNTRAELFPQVPVVHVGVASSFLAS
RPPLPEDVVGVPFAQDFAGTIAQALKWHPQAKHLVLITGAAERDREWEQDLRRAAGGFEGRVSIEMLAGRPMAEVLKRVA
ELGPDTVVATPGFFRDGAVSIYLPADSVRLIAQAATAPVYGPFVTFIGTGVVGGWMTSFEAMGREGGAIANRLLDGQAAS
SLRLPQVMPSALYVDWRQIERWGIDPDAVPADAVIQFRAPGFWQTYRKEAMAVALAFLLQSLLLTALLLERDRRRLAQSS
VDRHRFELAHASRLAVAGELTGSIAHEINQPLAAILSNAAAAEMMLDRGTARPGELKEILADIRRDDLRASEVIRRLRAL
LAKHEVVRQPVDLNDILGDVIALLNAEARRRRIALSARPVGETITVVGDRIQLQQVLINLIMNAMDALADTPEEQRNIVL
SLEGSATDATIRVRDRGHGITAEHLPKLFDSFFTTKRKGIGLGLSIARTLVEAHGGTITAESAPGEGATFTIQLPRVAPG
GSAWVGRS
>Mature_647_residues
TPERSNRGTRADGFGPDLPHGRWRAIWLAWRGVAICLVLMGAVAPARAETARRHVLVLFENNRLLPANVLGDRGITSALG
EVDRSTEISTEFLDYPRFSGAAYVGTITRFLREKYAVRPPGVIIVAGDTALDFVLNTRAELFPQVPVVHVGVASSFLASR
PPLPEDVVGVPFAQDFAGTIAQALKWHPQAKHLVLITGAAERDREWEQDLRRAAGGFEGRVSIEMLAGRPMAEVLKRVAE
LGPDTVVATPGFFRDGAVSIYLPADSVRLIAQAATAPVYGPFVTFIGTGVVGGWMTSFEAMGREGGAIANRLLDGQAASS
LRLPQVMPSALYVDWRQIERWGIDPDAVPADAVIQFRAPGFWQTYRKEAMAVALAFLLQSLLLTALLLERDRRRLAQSSV
DRHRFELAHASRLAVAGELTGSIAHEINQPLAAILSNAAAAEMMLDRGTARPGELKEILADIRRDDLRASEVIRRLRALL
AKHEVVRQPVDLNDILGDVIALLNAEARRRRIALSARPVGETITVVGDRIQLQQVLINLIMNAMDALADTPEEQRNIVLS
LEGSATDATIRVRDRGHGITAEHLPKLFDSFFTTKRKGIGLGLSIARTLVEAHGGTITAESAPGEGATFTIQLPRVAPGG
SAWVGRS

Specific function: Member of the two-component regulatory system nodV/nodW probably involved in the regulation of the transcription of genes involved in the nodulation process. NodV may function as a membrane-associated protein kinase that phosphorylates nodW in response to

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1790436, Length=231, Percent_Identity=32.9004329004329, Blast_Score=116, Evalue=5e-27,
Organism=Escherichia coli, GI1788549, Length=238, Percent_Identity=31.9327731092437, Blast_Score=109, Evalue=5e-25,
Organism=Escherichia coli, GI145693157, Length=247, Percent_Identity=28.7449392712551, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1786783, Length=228, Percent_Identity=28.9473684210526, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI48994928, Length=261, Percent_Identity=28.735632183908, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1788393, Length=229, Percent_Identity=27.0742358078603, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI87081816, Length=284, Percent_Identity=28.169014084507, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1790300, Length=279, Percent_Identity=28.3154121863799, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 70327; Mature: 70196

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPERSNRGTRADGFGPDLPHGRWRAIWLAWRGVAICLVLMGAVAPARAETARRHVLVLF
CCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEE
ENNRLLPANVLGDRGITSALGEVDRSTEISTEFLDYPRFSGAAYVGTITRFLREKYAVRP
ECCCCCCHHHCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC
PGVIIVAGDTALDFVLNTRAELFPQVPVVHVGVASSFLASRPPLPEDVVGVPFAQDFAGT
CCEEEEECCHHHHHHHHCHHHHCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCHHHHHHH
IAQALKWHPQAKHLVLITGAAERDREWEQDLRRAAGGFEGRVSIEMLAGRPMAEVLKRVA
HHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHH
ELGPDTVVATPGFFRDGAVSIYLPADSVRLIAQAATAPVYGPFVTFIGTGVVGGWMTSFE
HCCCCCEEECCCCCCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AMGREGGAIANRLLDGQAASSLRLPQVMPSALYVDWRQIERWGIDPDAVPADAVIQFRAP
HHCCCCHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC
GFWQTYRKEAMAVALAFLLQSLLLTALLLERDRRRLAQSSVDRHRFELAHASRLAVAGEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGSIAHEINQPLAAILSNAAAAEMMLDRGTARPGELKEILADIRRDDLRASEVIRRLRAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
LAKHEVVRQPVDLNDILGDVIALLNAEARRRRIALSARPVGETITVVGDRIQLQQVLINL
HHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHEEEEECCCCCCEEEECCCHHHHHHHHHHH
IMNAMDALADTPEEQRNIVLSLEGSATDATIRVRDRGHGITAEHLPKLFDSFFTTKRKGI
HHHHHHHHHCCCHHHCCEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC
GLGLSIARTLVEAHGGTITAESAPGEGATFTIQLPRVAPGGSAWVGRS
CCHHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
TPERSNRGTRADGFGPDLPHGRWRAIWLAWRGVAICLVLMGAVAPARAETARRHVLVLF
CCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEE
ENNRLLPANVLGDRGITSALGEVDRSTEISTEFLDYPRFSGAAYVGTITRFLREKYAVRP
ECCCCCCHHHCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC
PGVIIVAGDTALDFVLNTRAELFPQVPVVHVGVASSFLASRPPLPEDVVGVPFAQDFAGT
CCEEEEECCHHHHHHHHCHHHHCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCHHHHHHH
IAQALKWHPQAKHLVLITGAAERDREWEQDLRRAAGGFEGRVSIEMLAGRPMAEVLKRVA
HHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHH
ELGPDTVVATPGFFRDGAVSIYLPADSVRLIAQAATAPVYGPFVTFIGTGVVGGWMTSFE
HCCCCCEEECCCCCCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AMGREGGAIANRLLDGQAASSLRLPQVMPSALYVDWRQIERWGIDPDAVPADAVIQFRAP
HHCCCCHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC
GFWQTYRKEAMAVALAFLLQSLLLTALLLERDRRRLAQSSVDRHRFELAHASRLAVAGEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGSIAHEINQPLAAILSNAAAAEMMLDRGTARPGELKEILADIRRDDLRASEVIRRLRAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
LAKHEVVRQPVDLNDILGDVIALLNAEARRRRIALSARPVGETITVVGDRIQLQQVLINL
HHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHEEEEECCCCCCEEEECCCHHHHHHHHHHH
IMNAMDALADTPEEQRNIVLSLEGSATDATIRVRDRGHGITAEHLPKLFDSFFTTKRKGI
HHHHHHHHHCCCHHHCCEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC
GLGLSIARTLVEAHGGTITAESAPGEGATFTIQLPRVAPGGSAWVGRS
CCHHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2320582; 11157954; 12597275 [H]