| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is yjbE [H]
Identifier: 154247314
GI number: 154247314
Start: 3773960
End: 3775000
Strand: Direct
Name: yjbE [H]
Synonym: Xaut_3386
Alternate gene names: 154247314
Gene position: 3773960-3775000 (Clockwise)
Preceding gene: 154247313
Following gene: 154247316
Centisome position: 71.09
GC content: 68.11
Gene sequence:
>1041_bases ATGGATCTCGGCGCTGATCTTTCCTGGTTCGGCATCAGCCTGAAGATTTTCTTCATCGACCTGTTGCTCAGCGGCGACAA CGCCATCGTCATTGTGCTGGCCTGTCGCAGCCTGCCGGCGCAGCAGGTGCCGAAGGCGGTCGCGCTCGGCGCGGCGGGGG CGATCTTCTTCCGGCTGGTCATCGCGGCGGTGGCGGGGATCCTGCTCACCATCCCGCTGCTGAAGATCATCGGCGGGGCG CTGCTCTTCGTCATCGCCATCAACCTGCTCGCGGGAGAACATCTGCGGCGGCGGGAGGGCGAGCCGAGCCCCGGCCTTGA CCCGGCGATCAGCAACGACAGCGGCTTCATGGGGGCGGTGTTCGTCATCCTGATCGTGGACGCGATCATGAGCCTCGACA ACGTGGTGGCCCTCGCCGCCGTGTCGGAAGGCAACCTGCTCTATCTCATCGGCGGGTTGCTGTTCAGCGTGCCCCTGATC TTCTTCGGAAGCTTCGTCGTCACGGAGGCGATGAAGCATTTTCCGGCGATCATCCTCGTCGGCACAGCTTTCCTCGGCTG GGTGGCGGGCGAGATGATCGTGTCCGACCCGCTGTGGTCCGGCTGGATCGCAAGGCACGCCGAAGCGCTGTCGGTGCTGG TGCCGCTGGCATCGGTGGTGTTCGTGCTGGTCGAGGGCCGGATCACGGCGCAGGCGCGTTTCAGGGAGGCAAGTACCGCC GTGGCCAGCGGCGGCCCACCGCGCCGCGCCGAAGCAAGACCCCGCGCGCCGGCGCGACCCGCGCCCCGAAATGTCGAGGC GCCCACGCCGCGCGCTCTGGAGCCGCGCGCTCTGGACGTGGATGCGTCCGCGCCTGTTCTTCTCGCTGCATCCCTTCCGG CTTCGCCCGGCGTCCTGCTGGCGGCCAAGGACGACCAGGGGGCCGTCGCCCCGACGGAAAGCAAGGGGGACCGGCTGGTC CTCGTCGGCCTCATCCTCTTGTTCTGCGTCATAGCGGTGGTGATGGCGACCGTCGTGGCCGCCGGCAGCCGGCTCGGCTA G
Upstream 100 bases:
>100_bases CGGCGAAAAGCCCAGCGCGCGGGCCGAAGGCGGCCCAAGGCCATGAGGGATGCCGGATGCCGCACCCGGCCCCGCGTGTT GACCGTAGAGGACGCACCCC
Downstream 100 bases:
>100_bases CCGGCTGCCTCTGGGCCTCCTGTCGCCGTGCCCTACTTGCCGACCGCGTCCGCCACGCACTTGGTGGTGAAGCTCTTCCT GGCCGCGCCATAGAGCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MDLGADLSWFGISLKIFFIDLLLSGDNAIVIVLACRSLPAQQVPKAVALGAAGAIFFRLVIAAVAGILLTIPLLKIIGGA LLFVIAINLLAGEHLRRREGEPSPGLDPAISNDSGFMGAVFVILIVDAIMSLDNVVALAAVSEGNLLYLIGGLLFSVPLI FFGSFVVTEAMKHFPAIILVGTAFLGWVAGEMIVSDPLWSGWIARHAEALSVLVPLASVVFVLVEGRITAQARFREASTA VASGGPPRRAEARPRAPARPAPRNVEAPTPRALEPRALDVDASAPVLLAASLPASPGVLLAAKDDQGAVAPTESKGDRLV LVGLILLFCVIAVVMATVVAAGSRLG
Sequences:
>Translated_346_residues MDLGADLSWFGISLKIFFIDLLLSGDNAIVIVLACRSLPAQQVPKAVALGAAGAIFFRLVIAAVAGILLTIPLLKIIGGA LLFVIAINLLAGEHLRRREGEPSPGLDPAISNDSGFMGAVFVILIVDAIMSLDNVVALAAVSEGNLLYLIGGLLFSVPLI FFGSFVVTEAMKHFPAIILVGTAFLGWVAGEMIVSDPLWSGWIARHAEALSVLVPLASVVFVLVEGRITAQARFREASTA VASGGPPRRAEARPRAPARPAPRNVEAPTPRALEPRALDVDASAPVLLAASLPASPGVLLAAKDDQGAVAPTESKGDRLV LVGLILLFCVIAVVMATVVAAGSRLG >Mature_346_residues MDLGADLSWFGISLKIFFIDLLLSGDNAIVIVLACRSLPAQQVPKAVALGAAGAIFFRLVIAAVAGILLTIPLLKIIGGA LLFVIAINLLAGEHLRRREGEPSPGLDPAISNDSGFMGAVFVILIVDAIMSLDNVVALAAVSEGNLLYLIGGLLFSVPLI FFGSFVVTEAMKHFPAIILVGTAFLGWVAGEMIVSDPLWSGWIARHAEALSVLVPLASVVFVLVEGRITAQARFREASTA VASGGPPRRAEARPRAPARPAPRNVEAPTPRALEPRALDVDASAPVLLAASLPASPGVLLAAKDDQGAVAPTESKGDRLV LVGLILLFCVIAVVMATVVAAGSRLG
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022301 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 35890; Mature: 35890
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLGADLSWFGISLKIFFIDLLLSGDNAIVIVLACRSLPAQQVPKAVALGAAGAIFFRLV CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHH IAAVAGILLTIPLLKIIGGALLFVIAINLLAGEHLRRREGEPSPGLDPAISNDSGFMGAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH FVILIVDAIMSLDNVVALAAVSEGNLLYLIGGLLFSVPLIFFGSFVVTEAMKHFPAIILV HHHHHHHHHHHHHHHHEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GTAFLGWVAGEMIVSDPLWSGWIARHAEALSVLVPLASVVFVLVEGRITAQARFREASTA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VASGGPPRRAEARPRAPARPAPRNVEAPTPRALEPRALDVDASAPVLLAASLPASPGVLL HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCEEE AAKDDQGAVAPTESKGDRLVLVGLILLFCVIAVVMATVVAAGSRLG EEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDLGADLSWFGISLKIFFIDLLLSGDNAIVIVLACRSLPAQQVPKAVALGAAGAIFFRLV CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHH IAAVAGILLTIPLLKIIGGALLFVIAINLLAGEHLRRREGEPSPGLDPAISNDSGFMGAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH FVILIVDAIMSLDNVVALAAVSEGNLLYLIGGLLFSVPLIFFGSFVVTEAMKHFPAIILV HHHHHHHHHHHHHHHHEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GTAFLGWVAGEMIVSDPLWSGWIARHAEALSVLVPLASVVFVLVEGRITAQARFREASTA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VASGGPPRRAEARPRAPARPAPRNVEAPTPRALEPRALDVDASAPVLLAASLPASPGVLL HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCEEE AAKDDQGAVAPTESKGDRLVLVGLILLFCVIAVVMATVVAAGSRLG EEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]