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The map label for this gene is amaB [H]

Identifier: 154247304

GI number: 154247304

Start: 3762576

End: 3763844

Strand: Reverse

Name: amaB [H]

Synonym: Xaut_3376

Alternate gene names: 154247304

Gene position: 3763844-3762576 (Counterclockwise)

Preceding gene: 154247305

Following gene: 154247303

Centisome position: 70.9

GC content: 68.24

Gene sequence:

>1269_bases
ATGACCGCGCTGTCGACCCCTGCCCTGTCCAATCTCCAGATCAATGCCGACCGCCTCTGGAGCACCATCCTCGAAACCGC
CCAGTTCGGCGGCACGCCGAAGGGCGGCGTCAAGCGCCTGACCCTCAGCGAGGAAGACCGCCAGGTGCGCGACTGGTTCC
GCGCCGCCTGCGAGGCCGCCGGCTGCACCGTGAGCGTGGACGCACTGGGCAACATGTTCGCCCTGCGGCCGGGCAGGGAT
GCCAGCAAGGCGCCGCTGGGCATCGGCTCTCATCTCGACACCCAGCCCACCGGCGGCAAGTTCGACGGCATCCTCGGCAC
GCTGGCCGCCCTCGAGGTGGTGCGCGCGCTGAACGACGCCGGCATCGAGACCGACACGCCCTTGTGCGTCGTCAACTGGA
CCAATGAGGAAGGCTCGCGCTTCGCTCCCGCCATGATGGGCTCGGCCGGCCATGTGGCCGACCTGCCGCTGGCCGAAATC
CTCGCCCGCACCGATGCGGAGGGCGTGAGCGTGGGCGAGGCCCTCGACGCCATCGGCTATCGCGGCGAGGTGCCGCTGGG
CACCCAGAAATTCAGTGGCTTCCTGGAGCTGCATATCGAGCAGGGGCCGATCCTGGAGGCGGAGAACCTCACCATCGGCG
TGGTGGAGCACGGCCAGGGCATCATCTGGTACAACGGGCGTGTCACCGGCTTCGAGAGCCATGCGGGCTCCACCCCCATG
CACCTGCGCAAGGATGCCCTCGCCACCCTGTCCGAGATCGTGCTGGCGGTGGAAAAACTGGCGGTGGATCTGGGTCCGAA
TGCGGTGGGCACGGTGGCTGACATCACCATCGCCCGGCAGTCGCGCAACGTGATCCCCGGCGAAATCACCTTCGCCACCG
AATTCCGCACGCCGGACGCCGGCATCCTCGAAGCCTTGGACAAGGGCCTTCAGGCGGCGGTGGCGCGCATCGCCGACAAG
CGGAAGGTGAGCGTTCAGCTCGACACCATCTGGCGCAAGGAGCCCACCCATTTCGATCCGAAGGTGACGGGCGCGGTGGC
CGCCGCGGCGCAGAAGCTGGGCCTCAGCCACCGGCCCATGGTCTCTGGCGCGGGGCATGATTCCTTCCACCTCGCCACTA
TCGTGCCCACGGGCATGATCTTCGTGCCCTGCAAGGACGGCGTGAGCCACAACGAGCTGGAATCCGCCACCAAGGACGAC
TGCGCGGCGGGCGCCAACGTGCTGCTCCATGCCGTGCTGGCGCTGGCCGGCGATGCCGCCAAAGCATGA

Upstream 100 bases:

>100_bases
CACAGCAGCGTTGCACCGAGCGCCTGCCTCCGGACGTGGAACTTGCCCCCGGCCGGACTGTAAGGTGCGTGCTGGCTGAA
AATCCCGTTCCGGTGACCTG

Downstream 100 bases:

>100_bases
GGCGCGCGCCGTGAGCTGTGCCCCCTCCCTCCTCCGCGCCCGCCCGCTGACGGCGGAGAGTTTCGCGCCCTTCGGCGACG
TGCTGCGTGTGCCGCAGGAG

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MTALSTPALSNLQINADRLWSTILETAQFGGTPKGGVKRLTLSEEDRQVRDWFRAACEAAGCTVSVDALGNMFALRPGRD
ASKAPLGIGSHLDTQPTGGKFDGILGTLAALEVVRALNDAGIETDTPLCVVNWTNEEGSRFAPAMMGSAGHVADLPLAEI
LARTDAEGVSVGEALDAIGYRGEVPLGTQKFSGFLELHIEQGPILEAENLTIGVVEHGQGIIWYNGRVTGFESHAGSTPM
HLRKDALATLSEIVLAVEKLAVDLGPNAVGTVADITIARQSRNVIPGEITFATEFRTPDAGILEALDKGLQAAVARIADK
RKVSVQLDTIWRKEPTHFDPKVTGAVAAAAQKLGLSHRPMVSGAGHDSFHLATIVPTGMIFVPCKDGVSHNELESATKDD
CAAGANVLLHAVLALAGDAAKA

Sequences:

>Translated_422_residues
MTALSTPALSNLQINADRLWSTILETAQFGGTPKGGVKRLTLSEEDRQVRDWFRAACEAAGCTVSVDALGNMFALRPGRD
ASKAPLGIGSHLDTQPTGGKFDGILGTLAALEVVRALNDAGIETDTPLCVVNWTNEEGSRFAPAMMGSAGHVADLPLAEI
LARTDAEGVSVGEALDAIGYRGEVPLGTQKFSGFLELHIEQGPILEAENLTIGVVEHGQGIIWYNGRVTGFESHAGSTPM
HLRKDALATLSEIVLAVEKLAVDLGPNAVGTVADITIARQSRNVIPGEITFATEFRTPDAGILEALDKGLQAAVARIADK
RKVSVQLDTIWRKEPTHFDPKVTGAVAAAAQKLGLSHRPMVSGAGHDSFHLATIVPTGMIFVPCKDGVSHNELESATKDD
CAAGANVLLHAVLALAGDAAKA
>Mature_421_residues
TALSTPALSNLQINADRLWSTILETAQFGGTPKGGVKRLTLSEEDRQVRDWFRAACEAAGCTVSVDALGNMFALRPGRDA
SKAPLGIGSHLDTQPTGGKFDGILGTLAALEVVRALNDAGIETDTPLCVVNWTNEEGSRFAPAMMGSAGHVADLPLAEIL
ARTDAEGVSVGEALDAIGYRGEVPLGTQKFSGFLELHIEQGPILEAENLTIGVVEHGQGIIWYNGRVTGFESHAGSTPMH
LRKDALATLSEIVLAVEKLAVDLGPNAVGTVADITIARQSRNVIPGEITFATEFRTPDAGILEALDKGLQAAVARIADKR
KVSVQLDTIWRKEPTHFDPKVTGAVAAAAQKLGLSHRPMVSGAGHDSFHLATIVPTGMIFVPCKDGVSHNELESATKDDC
AAGANVLLHAVLALAGDAAKA

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=392, Percent_Identity=31.8877551020408, Blast_Score=186, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 44267; Mature: 44136

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALSTPALSNLQINADRLWSTILETAQFGGTPKGGVKRLTLSEEDRQVRDWFRAACEAA
CCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHC
GCTVSVDALGNMFALRPGRDASKAPLGIGSHLDTQPTGGKFDGILGTLAALEVVRALNDA
CCEEEHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GIETDTPLCVVNWTNEEGSRFAPAMMGSAGHVADLPLAEILARTDAEGVSVGEALDAIGY
CCCCCCCEEEEEECCCCCCEECHHHHCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCC
RGEVPLGTQKFSGFLELHIEQGPILEAENLTIGVVEHGQGIIWYNGRVTGFESHAGSTPM
CCCCCCCHHHHCCEEEEEECCCCEEEECCCEEEEEECCCEEEEECCEEECCCCCCCCCCH
HLRKDALATLSEIVLAVEKLAVDLGPNAVGTVADITIARQSRNVIPGEITFATEFRTPDA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEECCCCCCCCCEEEEEEECCCCCH
GILEALDKGLQAAVARIADKRKVSVQLDTIWRKEPTHFDPKVTGAVAAAAQKLGLSHRPM
HHHHHHHHHHHHHHHHHHCCCEEEEEEEEHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
VSGAGHDSFHLATIVPTGMIFVPCKDGVSHNELESATKDDCAAGANVLLHAVLALAGDAA
CCCCCCCCEEEEEEECCCEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
KA
CC
>Mature Secondary Structure 
TALSTPALSNLQINADRLWSTILETAQFGGTPKGGVKRLTLSEEDRQVRDWFRAACEAA
CCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHC
GCTVSVDALGNMFALRPGRDASKAPLGIGSHLDTQPTGGKFDGILGTLAALEVVRALNDA
CCEEEHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GIETDTPLCVVNWTNEEGSRFAPAMMGSAGHVADLPLAEILARTDAEGVSVGEALDAIGY
CCCCCCCEEEEEECCCCCCEECHHHHCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCC
RGEVPLGTQKFSGFLELHIEQGPILEAENLTIGVVEHGQGIIWYNGRVTGFESHAGSTPM
CCCCCCCHHHHCCEEEEEECCCCEEEECCCEEEEEECCCEEEEECCEEECCCCCCCCCCH
HLRKDALATLSEIVLAVEKLAVDLGPNAVGTVADITIARQSRNVIPGEITFATEFRTPDA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEECCCCCCCCCEEEEEEECCCCCH
GILEALDKGLQAAVARIADKRKVSVQLDTIWRKEPTHFDPKVTGAVAAAAQKLGLSHRPM
HHHHHHHHHHHHHHHHHHCCCEEEEEEEEHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
VSGAGHDSFHLATIVPTGMIFVPCKDGVSHNELESATKDDCAAGANVLLHAVLALAGDAA
CCCCCCCCEEEEEEECCCEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
KA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]