| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is allA [H]
Identifier: 154247303
GI number: 154247303
Start: 3762077
End: 3762592
Strand: Reverse
Name: allA [H]
Synonym: Xaut_3375
Alternate gene names: 154247303
Gene position: 3762592-3762077 (Counterclockwise)
Preceding gene: 154247304
Following gene: 154247300
Centisome position: 70.87
GC content: 72.67
Gene sequence:
>516_bases ATGCCGCCAAAGCATGAGGCGCGCGCCGTGAGCTGTGCCCCCTCCCTCCTCCGCGCCCGCCCGCTGACGGCGGAGAGTTT CGCGCCCTTCGGCGACGTGCTGCGTGTGCCGCAGGAGGTGGGGACGCGCACCTATTTCGACGGCGCGCTGGCGAGCCTGA AGCCGCAGACGCCGGCGAGCCTCTCCCTCATCCTCGCGGCCCCCAGCCCGGCGCGGCCGGTGCCGGTCACCATTATCGAG CGGCACCGGCTCACGTCGCAGAGCTTCGTGCCCATGGCGCCCACCCCATGGCTGGTGGTGGTGGCGCCGGATGCGCCCGA CGGATCGCCCGACCTCGCGGCCGCCGTCGCCTTCCTGCCCGGCCCTGGGCAGGGCATCACCCTGAAGAGCGGCGTGTGGC ACGCCCCGCTCACGGTGCTGGAGGCCCCTGCCCCGTTCGCCATCTTCATGTGGCGCGACTTCGGCCCGGACGACGAGGAC TTCGCCGACATCACCCCGTTCACCGTGGTGCTCTGA
Upstream 100 bases:
>100_bases AAGGACGGCGTGAGCCACAACGAGCTGGAATCCGCCACCAAGGACGACTGCGCGGCGGGCGCCAACGTGCTGCTCCATGC CGTGCTGGCGCTGGCCGGCG
Downstream 100 bases:
>100_bases ACCTTCGAGACGGGGCCGCTCAGGCCCCGCCTTCCAGCAGGTCCGCCGGCAACAGCGCGTCGGGCAGGTTCTGGTAGCTC ACCGGTCGCAGGAAGCGGCG
Product: ureidoglycolate hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MPPKHEARAVSCAPSLLRARPLTAESFAPFGDVLRVPQEVGTRTYFDGALASLKPQTPASLSLILAAPSPARPVPVTIIE RHRLTSQSFVPMAPTPWLVVVAPDAPDGSPDLAAAVAFLPGPGQGITLKSGVWHAPLTVLEAPAPFAIFMWRDFGPDDED FADITPFTVVL
Sequences:
>Translated_171_residues MPPKHEARAVSCAPSLLRARPLTAESFAPFGDVLRVPQEVGTRTYFDGALASLKPQTPASLSLILAAPSPARPVPVTIIE RHRLTSQSFVPMAPTPWLVVVAPDAPDGSPDLAAAVAFLPGPGQGITLKSGVWHAPLTVLEAPAPFAIFMWRDFGPDDED FADITPFTVVL >Mature_170_residues PPKHEARAVSCAPSLLRARPLTAESFAPFGDVLRVPQEVGTRTYFDGALASLKPQTPASLSLILAAPSPARPVPVTIIER HRLTSQSFVPMAPTPWLVVVAPDAPDGSPDLAAAVAFLPGPGQGITLKSGVWHAPLTVLEAPAPFAIFMWRDFGPDDEDF ADITPFTVVL
Specific function: Involved In The Anaerobic Utilization Of Allantoin. Reinforces The Induction Of Genes Involved In The Degradation Of Allantoin And Glyoxylate By Producing Glyoxylate. [C]
COG id: COG3194
COG function: function code F; Ureidoglycolate hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureidoglycolate hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786714, Length=128, Percent_Identity=33.59375, Blast_Score=72, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR007247 [H]
Pfam domain/function: PF04115 Ureidogly_hydro [H]
EC number: =3.5.3.19 [H]
Molecular weight: Translated: 18155; Mature: 18024
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPKHEARAVSCAPSLLRARPLTAESFAPFGDVLRVPQEVGTRTYFDGALASLKPQTPAS CCCCCCCEEEHHCHHHHHCCCCCHHHCCCHHHHHHCHHHHCCEEEECCHHHCCCCCCCCC LSLILAAPSPARPVPVTIIERHRLTSQSFVPMAPTPWLVVVAPDAPDGSPDLAAAVAFLP EEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECC GPGQGITLKSGVWHAPLTVLEAPAPFAIFMWRDFGPDDEDFADITPFTVVL CCCCCEEECCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEC >Mature Secondary Structure PPKHEARAVSCAPSLLRARPLTAESFAPFGDVLRVPQEVGTRTYFDGALASLKPQTPAS CCCCCCEEEHHCHHHHHCCCCCHHHCCCHHHHHHCHHHHCCEEEECCHHHCCCCCCCCC LSLILAAPSPARPVPVTIIERHRLTSQSFVPMAPTPWLVVVAPDAPDGSPDLAAAVAFLP EEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECC GPGQGITLKSGVWHAPLTVLEAPAPFAIFMWRDFGPDDEDFADITPFTVVL CCCCCEEECCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]