| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154247301
Identifier: 154247301
GI number: 154247301
Start: 3759729
End: 3760529
Strand: Direct
Name: 154247301
Synonym: Xaut_3373
Alternate gene names: NA
Gene position: 3759729-3760529 (Clockwise)
Preceding gene: 154247293
Following gene: 154247302
Centisome position: 70.82
GC content: 66.92
Gene sequence:
>801_bases ATGCTGAAACGACTCCTGCTCACGGGCGCCGCCGGTGGGCTCGGGCGGGCCATCCGCCCGCACCTTGCGCGGTTTGCCGA GACCGTACGCGTCTCCGACATCGCCGACCTGGGCGCCGTGGCCCCCCATGAGGAGGCGGTGCGCTGCGATCTCTCCGACG CCGCGGCGGTGCGCGATCTGGTTGCGGGATGCGACGGCATCGTGCATCTGGGCGGCATCTCGGTGGAGGACAAATTCTCG AAGATCGTGGGCGCCAACATCGTCGGCCTCTATAATCTCTACGAGGCGGCGCGGGCCGAGGGCCAGCCGCGCATCCTGTT TGCTTCCTCCAACCACACGATCGGCTTCTACCGGCAGGACGAGCACCTCGATGCCGCCGCCCCGCTCCGGCCGGACGGGC TCTACGGCGTGTCCAAATGCTTCGGCGAGGCGCTGGCCCGCATGTATTTCGAGAAGTTCGGGCAGGAAACGGCGCTGGTG CGGATCGGCAGCTGCATGGAGAAGCCCACCAATTACCGCATGCTCTCCACCTGGATGTCGTATGAGGACTTCCTCGCCCT CATCGGCTGCATCTTCCGCGCCCCCCGGCTCGGCTGCCCGGTGATCTGGGGCGTGTCCGACAATGACACCAGGTGGTGGG ACAATAGCGCCGTCTCCTATCTCGGCTGGCGGCCGCGCGACAATGCCGAGCGCTTCCGCGCCGAGTTGGAGGCCAGCCTG CCACGGCCGGCACCCGATGCGCCCATGGCGCTCTATCAGGGTGGCCAGTTCACCCAGGATCCGATTTTCGAGGAGAAGTG A
Upstream 100 bases:
>100_bases TCAAGTTTGGCCGAATATTGACCGGAATGTCCATACATGTATGATGACTTATCATTTTCCAGCCGGATGCGGGCGCGCAA GATCCAGCCAAGAGGTCCAA
Downstream 100 bases:
>100_bases GATGGACGCGACCCCTGACGGCGGCCACCTGATCGCCGGGGCCTGGGTAGCCGGCGGCCCCACCTTCGAGAGCGCGCCGG CCACCGGCACGCCGCGCCGC
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NAD Dependent Epimerase/Dehydratase Family Protein; TDP-Glucose-4 6-Dehydratase-Related Protein; Sugar Epimerase/Dehydratase-Like Protein; DTDP-Glucose 4 6-Dehydratase; Oxidoreductase Protein; UDP-Glucose 4-Epimerase Protein; UDP Glucose Epimerase; Sugar Epimerase/Dehydratase Homolog; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Dehydratase/Epimerase; Epimerase/Dehydratase; UDP-Glucose 4-Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; Short Chain Dehydrogenase Family Protein; NDP-Sugar Epimerase; Nucleoside-Diphosphate-Sugar Epimerase Dehydratase Protein; NAD Dependent Epimerase/Dehydratase
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MLKRLLLTGAAGGLGRAIRPHLARFAETVRVSDIADLGAVAPHEEAVRCDLSDAAAVRDLVAGCDGIVHLGGISVEDKFS KIVGANIVGLYNLYEAARAEGQPRILFASSNHTIGFYRQDEHLDAAAPLRPDGLYGVSKCFGEALARMYFEKFGQETALV RIGSCMEKPTNYRMLSTWMSYEDFLALIGCIFRAPRLGCPVIWGVSDNDTRWWDNSAVSYLGWRPRDNAERFRAELEASL PRPAPDAPMALYQGGQFTQDPIFEEK
Sequences:
>Translated_266_residues MLKRLLLTGAAGGLGRAIRPHLARFAETVRVSDIADLGAVAPHEEAVRCDLSDAAAVRDLVAGCDGIVHLGGISVEDKFS KIVGANIVGLYNLYEAARAEGQPRILFASSNHTIGFYRQDEHLDAAAPLRPDGLYGVSKCFGEALARMYFEKFGQETALV RIGSCMEKPTNYRMLSTWMSYEDFLALIGCIFRAPRLGCPVIWGVSDNDTRWWDNSAVSYLGWRPRDNAERFRAELEASL PRPAPDAPMALYQGGQFTQDPIFEEK >Mature_266_residues MLKRLLLTGAAGGLGRAIRPHLARFAETVRVSDIADLGAVAPHEEAVRCDLSDAAAVRDLVAGCDGIVHLGGISVEDKFS KIVGANIVGLYNLYEAARAEGQPRILFASSNHTIGFYRQDEHLDAAAPLRPDGLYGVSKCFGEALARMYFEKFGQETALV RIGSCMEKPTNYRMLSTWMSYEDFLALIGCIFRAPRLGCPVIWGVSDNDTRWWDNSAVSYLGWRPRDNAERFRAELEASL PRPAPDAPMALYQGGQFTQDPIFEEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29331; Mature: 29331
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRLLLTGAAGGLGRAIRPHLARFAETVRVSDIADLGAVAPHEEAVRCDLSDAAAVRDL CCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHH VAGCDGIVHLGGISVEDKFSKIVGANIVGLYNLYEAARAEGQPRILFASSNHTIGFYRQD HHCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECC EHLDAAAPLRPDGLYGVSKCFGEALARMYFEKFGQETALVRIGSCMEKPTNYRMLSTWMS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHC YEDFLALIGCIFRAPRLGCPVIWGVSDNDTRWWDNSAVSYLGWRPRDNAERFRAELEASL HHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCC PRPAPDAPMALYQGGQFTQDPIFEEK CCCCCCCCHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MLKRLLLTGAAGGLGRAIRPHLARFAETVRVSDIADLGAVAPHEEAVRCDLSDAAAVRDL CCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHH VAGCDGIVHLGGISVEDKFSKIVGANIVGLYNLYEAARAEGQPRILFASSNHTIGFYRQD HHCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECC EHLDAAAPLRPDGLYGVSKCFGEALARMYFEKFGQETALVRIGSCMEKPTNYRMLSTWMS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHC YEDFLALIGCIFRAPRLGCPVIWGVSDNDTRWWDNSAVSYLGWRPRDNAERFRAELEASL HHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCC PRPAPDAPMALYQGGQFTQDPIFEEK CCCCCCCCHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA