| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is aldH [H]
Identifier: 154247302
GI number: 154247302
Start: 3760531
End: 3762057
Strand: Direct
Name: aldH [H]
Synonym: Xaut_3374
Alternate gene names: 154247302
Gene position: 3760531-3762057 (Clockwise)
Preceding gene: 154247301
Following gene: 154247310
Centisome position: 70.83
GC content: 71.84
Gene sequence:
>1527_bases ATGGACGCGACCCCTGACGGCGGCCACCTGATCGCCGGGGCCTGGGTAGCCGGCGGCCCCACCTTCGAGAGCGCGCCGGC CACCGGCACGCCGCGCCGCTTCTTCTCGGCGACCGAAGTTGAGGTGGATGCGGCCGCACGCGCGGCGGAAGACGCCTTCG CCTCGTTTGGCTGGTCCAGCCGCAAGGCGCGGGCGGAGTTCCTCGACGCCATCGCCGCGCAGATGGAGGCGCGCGGCGCC GACATCACCGCCATCGCGCAGGAGGAGACCGGCCTGCCGGCGCCCCGCCTCGCCGGGGAACTGGCGCGCACCACCGGGCA ATTGCGCCTGTTCGCCCGCCACATCCTTGCCGGCGCCTATCTGGACCGGCGCCACGACGTGGCCTTGCCGGACCGCCAGC CCCTGCCACGGCCGGACATTCGGCTGATGCAACGGCCCATCGGGCCGGTGGCGGTGTTCGGCGCCTCCAACTTCCCGCTC GCCTTCTCTGTGGCTGGCGGCGACACCGCCTCTGCCCTCGCCGCCGGCTGCCCGGTGGTGGTGAAGGGCCATCCCGCCCA TCCCGGCACCAGCCAGAAGGTGGCCGAGGCCATCGACGCAGCGCGCGCGGCGCTGGACCTTCATCCCGGCGTGTTCGCTC TGCTCCAGTCCTTCACGGTGGAGGGCGGCACCGCGCTGGTGCGCCATCCGCTCATCAAGGCGGTGGGGTTCACCGGCAGT CTCGGCGCGGGGCGTGCCCTGTTCGACCTGTGCGCCGCCCGCCCGGAACCGATCCCCTTCTTCGGCGAGCTGGGCTCGGT CAATCCCATGTTCCTGCTGCCGGCGGCGTTGAAGGCGCGTAGCGGTACGCTCGGCGCCGGCTGGGCCGGGTCGCTCTCCA TGGGCGTCGGCCAGTTTTGCACCAATCCCGGCATCGCCTTCGCCGTCGACGGGCCGGACACGGATGCCTTCCTTGCCGCG ACTGAGGCGGGACTGGGACAGGTGGCGCCGCAGCCCATGCTGACCGATGGCATCGCCGCCGCCTTCCGCCGCGGGCGGGA CCATGTGGCGCAAACGCCTGCCGTGCGATGCGCGTTGAAGGCAGACGCCGACGGCCGCAACGGCGCGCCGGCCCTGTTCG AGACCACGGGCGCCGCCTTCCGCGCCGATTCAAGCCTTGCTCACGAGGTGTTCGGGCCGCTCGGCATCCTGGTGCGGGTC GAGGATGAGGATGAGATGGTCGCGCTCGCGGCGGGGCTGGAAGGCCAACTCACAGCCACCCTCCAGATGGATGCGGACGA CACGCCACTGGCCAAGCGGCTGATGCCGATCCTCGAGCGCAAGGCAGGCCGGGTGCTGGCCAATGGCTTTCCCACCGGCG TCGAGGTCTGCGATGCCATGGTGCATGGCGGGCCTTATCCCGCCTCCACCAATTTCGGCGCCACCTCGGTGGGGACGATG GCCATCCGCCGCTTCCTGCGACCGGTGAGCTACCAGAACCTGCCCGACGCGCTGTTGCCGGCGGACCTGCTGGAAGGCGG GGCCTGA
Upstream 100 bases:
>100_bases GAGTTGGAGGCCAGCCTGCCACGGCCGGCACCCGATGCGCCCATGGCGCTCTATCAGGGTGGCCAGTTCACCCAGGATCC GATTTTCGAGGAGAAGTGAG
Downstream 100 bases:
>100_bases GCGGCCCCGTCTCGAAGGTTCAGAGCACCACGGTGAACGGGGTGATGTCGGCGAAGTCCTCGTCGTCCGGGCCGAAGTCG CGCCACATGAAGATGGCGAA
Product: aldehyde dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MDATPDGGHLIAGAWVAGGPTFESAPATGTPRRFFSATEVEVDAAARAAEDAFASFGWSSRKARAEFLDAIAAQMEARGA DITAIAQEETGLPAPRLAGELARTTGQLRLFARHILAGAYLDRRHDVALPDRQPLPRPDIRLMQRPIGPVAVFGASNFPL AFSVAGGDTASALAAGCPVVVKGHPAHPGTSQKVAEAIDAARAALDLHPGVFALLQSFTVEGGTALVRHPLIKAVGFTGS LGAGRALFDLCAARPEPIPFFGELGSVNPMFLLPAALKARSGTLGAGWAGSLSMGVGQFCTNPGIAFAVDGPDTDAFLAA TEAGLGQVAPQPMLTDGIAAAFRRGRDHVAQTPAVRCALKADADGRNGAPALFETTGAAFRADSSLAHEVFGPLGILVRV EDEDEMVALAAGLEGQLTATLQMDADDTPLAKRLMPILERKAGRVLANGFPTGVEVCDAMVHGGPYPASTNFGATSVGTM AIRRFLRPVSYQNLPDALLPADLLEGGA
Sequences:
>Translated_508_residues MDATPDGGHLIAGAWVAGGPTFESAPATGTPRRFFSATEVEVDAAARAAEDAFASFGWSSRKARAEFLDAIAAQMEARGA DITAIAQEETGLPAPRLAGELARTTGQLRLFARHILAGAYLDRRHDVALPDRQPLPRPDIRLMQRPIGPVAVFGASNFPL AFSVAGGDTASALAAGCPVVVKGHPAHPGTSQKVAEAIDAARAALDLHPGVFALLQSFTVEGGTALVRHPLIKAVGFTGS LGAGRALFDLCAARPEPIPFFGELGSVNPMFLLPAALKARSGTLGAGWAGSLSMGVGQFCTNPGIAFAVDGPDTDAFLAA TEAGLGQVAPQPMLTDGIAAAFRRGRDHVAQTPAVRCALKADADGRNGAPALFETTGAAFRADSSLAHEVFGPLGILVRV EDEDEMVALAAGLEGQLTATLQMDADDTPLAKRLMPILERKAGRVLANGFPTGVEVCDAMVHGGPYPASTNFGATSVGTM AIRRFLRPVSYQNLPDALLPADLLEGGA >Mature_508_residues MDATPDGGHLIAGAWVAGGPTFESAPATGTPRRFFSATEVEVDAAARAAEDAFASFGWSSRKARAEFLDAIAAQMEARGA DITAIAQEETGLPAPRLAGELARTTGQLRLFARHILAGAYLDRRHDVALPDRQPLPRPDIRLMQRPIGPVAVFGASNFPL AFSVAGGDTASALAAGCPVVVKGHPAHPGTSQKVAEAIDAARAALDLHPGVFALLQSFTVEGGTALVRHPLIKAVGFTGS LGAGRALFDLCAARPEPIPFFGELGSVNPMFLLPAALKARSGTLGAGWAGSLSMGVGQFCTNPGIAFAVDGPDTDAFLAA TEAGLGQVAPQPMLTDGIAAAFRRGRDHVAQTPAVRCALKADADGRNGAPALFETTGAAFRADSSLAHEVFGPLGILVRV EDEDEMVALAAGLEGQLTATLQMDADDTPLAKRLMPILERKAGRVLANGFPTGVEVCDAMVHGGPYPASTNFGATSVGTM AIRRFLRPVSYQNLPDALLPADLLEGGA
Specific function: Catalyzes the oxidation of long-chain aliphatic aldehydes to acids. May be implicated in controlling luminescence as it catalyzes the oxidation of the fatty aldehyde substrate for the light-emitting reaction [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI87081896, Length=409, Percent_Identity=27.6283618581907, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1788042, Length=425, Percent_Identity=27.2941176470588, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1789015, Length=432, Percent_Identity=26.1574074074074, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1787558, Length=477, Percent_Identity=26.4150943396226, Blast_Score=68, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71995606, Length=390, Percent_Identity=27.4358974358974, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71995613, Length=390, Percent_Identity=27.4358974358974, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI281362580, Length=432, Percent_Identity=26.6203703703704, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI62472918, Length=432, Percent_Identity=26.6203703703704, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI62472926, Length=432, Percent_Identity=26.6203703703704, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI62472936, Length=432, Percent_Identity=26.6203703703704, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI21356737, Length=432, Percent_Identity=26.6203703703704, Blast_Score=73, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 [H]
Pfam domain/function: PF00171 Aldedh [H]
EC number: =1.2.1.4 [H]
Molecular weight: Translated: 52432; Mature: 52432
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDATPDGGHLIAGAWVAGGPTFESAPATGTPRRFFSATEVEVDAAARAAEDAFASFGWSS CCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHCCCCEEHHHHHHHHHHHHHHCCCCC RKARAEFLDAIAAQMEARGADITAIAQEETGLPAPRLAGELARTTGQLRLFARHILAGAY HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LDRRHDVALPDRQPLPRPDIRLMQRPIGPVAVFGASNFPLAFSVAGGDTASALAAGCPVV HCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCEEEEECCCCHHHHHHCCCCEE VKGHPAHPGTSQKVAEAIDAARAALDLHPGVFALLQSFTVEGGTALVRHPLIKAVGFTGS EECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC LGAGRALFDLCAARPEPIPFFGELGSVNPMFLLPAALKARSGTLGAGWAGSLSMGVGQFC CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHCCCCCCCCCCCCHHHCHHHHH TNPGIAFAVDGPDTDAFLAATEAGLGQVAPQPMLTDGIAAAFRRGRDHVAQTPAVRCALK CCCCEEEEECCCCCCCEEEEHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHCCCHHEEEEE ADADGRNGAPALFETTGAAFRADSSLAHEVFGPLGILVRVEDEDEMVALAAGLEGQLTAT CCCCCCCCCCCCEECCCCHHCCCCHHHHHHHCCEEEEEEECCCCCEEEEEECCCCCEEEE LQMDADDTPLAKRLMPILERKAGRVLANGFPTGVEVCDAMVHGGPYPASTNFGATSVGTM EEECCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHH AIRRFLRPVSYQNLPDALLPADLLEGGA HHHHHHHHCCCCCCCCHHCCHHHHCCCC >Mature Secondary Structure MDATPDGGHLIAGAWVAGGPTFESAPATGTPRRFFSATEVEVDAAARAAEDAFASFGWSS CCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHCCCCEEHHHHHHHHHHHHHHCCCCC RKARAEFLDAIAAQMEARGADITAIAQEETGLPAPRLAGELARTTGQLRLFARHILAGAY HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LDRRHDVALPDRQPLPRPDIRLMQRPIGPVAVFGASNFPLAFSVAGGDTASALAAGCPVV HCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCEEEEECCCCHHHHHHCCCCEE VKGHPAHPGTSQKVAEAIDAARAALDLHPGVFALLQSFTVEGGTALVRHPLIKAVGFTGS EECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC LGAGRALFDLCAARPEPIPFFGELGSVNPMFLLPAALKARSGTLGAGWAGSLSMGVGQFC CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHCCCCCCCCCCCCHHHCHHHHH TNPGIAFAVDGPDTDAFLAATEAGLGQVAPQPMLTDGIAAAFRRGRDHVAQTPAVRCALK CCCCEEEEECCCCCCCEEEEHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHCCCHHEEEEE ADADGRNGAPALFETTGAAFRADSSLAHEVFGPLGILVRVEDEDEMVALAAGLEGQLTAT CCCCCCCCCCCCEECCCCHHCCCCHHHHHHHCCEEEEEEECCCCCEEEEEECCCCCEEEE LQMDADDTPLAKRLMPILERKAGRVLANGFPTGVEVCDAMVHGGPYPASTNFGATSVGTM EEECCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHH AIRRFLRPVSYQNLPDALLPADLLEGGA HHHHHHHHCCCCCCCCHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8527447; 10903148 [H]