| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247260
Identifier: 154247260
GI number: 154247260
Start: 3706141
End: 3707457
Strand: Reverse
Name: 154247260
Synonym: Xaut_3332
Alternate gene names: NA
Gene position: 3707457-3706141 (Counterclockwise)
Preceding gene: 154247261
Following gene: 154247259
Centisome position: 69.83
GC content: 70.69
Gene sequence:
>1317_bases ATGATCGACGCGACCCACGATCCCGCCCGCACCAGCTGGGTGGCCTCGGCCAACGGCCATTCCGACTTTCCCATCCAGAA CCTGCCCTTCGGCATCTTCAGCCCGCCCGGCGGGCAACCGCGCGGGGGCGTCGCCATCGGCGACGACATCCTCGATCTCG CCGTGGCGCTGGAGCTGGGCCTGTTCGAGGGCATCGCCAAGGCGGCGGCGCAGGCGGCAGCAGGGTCGACCCTCAACGCC TTCTTCGCCCTCGGGGCGGCGCCGCGCGCCGCGTTGCGCGCGCGGCTCGTCCAGTTGCTGGATGCCCATGGCGTGGAGCG CTCCAACGTGGAGCCCCACGCCGGCCGGCTGCTGCACCGCGCCGCCGACTGCACCCTGCACCTGCCCGCCGCCATCGGCG ACTATACGGATTTCTACGCCGGCATCTCCCACGCCACCAATGTGGGCAAGCTGTTCCGGCCGGATAACCCATTGCTGCCC AACTATAAATACGTGCCCATCGGCTATCACGGGCGGGCCTCCTCCATCCGGCCCTCGGGCTTCGACGTGCGCCGGCCCAA CGGCCAGCGCAAGCGGGCCGACGAGGCGGAGCCGACCTTCGGCCCCTCCGGCAACCTCGACTACGAGCTGGAGCTGGGCA TCTTCGTCGGGCCGGGCAACGCCCTCGGCGAGCCAGTTTCCATCCACGCCGCGGGCGAGCACATCGCCGGCTTCTGCCTG CTCAACGACTGGTCGGCCCGCGACATCCAGGGCTGGGAATACCAGCCGCTCGGCCCGTTCCTCGCCAAGAACTTCATCAC CACCGTGTCGCCCTGGGTGGTGACGCCGGAAGCGCTGGCCCCCTTCCGCATCCCCCAGCCCGTGCGGCCGCAGGGCGATC CCGCCCCCCTGCCCTATCTGCTCGATGCCGCCGACCAGGCGCAGGGCGCCCTCGACATCACCCTGGAGGTGCTCATCGAG ACGCCGGGGCTGAAGGAGAAGGGCCTGCCGCCCCATCGCCTGTCGCGCGGCTCATCAAGCGACCTCTACTGGACCGCCGC CCAGTTCGTCGCGCACCACACCTGCGGCGGCTGCAACCTGTCGCCCGGCGACCTCATGGGCACCGGCACCATCTCCGGCC CCACGCCGGATAGCTTCGGCAGCCTTTTGGAACTGTCGCAGGGCGGCAAGGCGCCTCTCACCCTCGCCTCGGGCGAAGAG CGGCGCTTTCTGGAGGATGGCGACACGGTGATCATCACCGGCCGCGCCGCGCGCGAGGGCTTCGTCTCCATCGGCTTCGG CGCCTGCAGTGGCACCATCCTGCCGGCGCTCGGGTGA
Upstream 100 bases:
>100_bases ATGCGTGGTGAGGTGAGGGTCTTCCCCGTCTGACTTTGCCTCCGCGCCGGCGCCGCATCCCGGCGCCGGCCCTTCCTTGC CCCCTGCCCGGACCGCTCCC
Downstream 100 bases:
>100_bases GCGCCGTGCGGCTCTATACCTATTGGCGCTCCACCTCGGCCTACCGGGTGCGCATCGCGCTCGCCCTGAAGGGCATCGCG GTGGAACAGGTGCCGGTGCA
Product: fumarylacetoacetase
Products: acetoacetate; fumarate
Alternate protein names: Fumarylacetoacetate Hydrolase; Fumarylacetoacetase Hydrolase; LOW QUALITY PROTEIN Fumarylacetoacetase
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MIDATHDPARTSWVASANGHSDFPIQNLPFGIFSPPGGQPRGGVAIGDDILDLAVALELGLFEGIAKAAAQAAAGSTLNA FFALGAAPRAALRARLVQLLDAHGVERSNVEPHAGRLLHRAADCTLHLPAAIGDYTDFYAGISHATNVGKLFRPDNPLLP NYKYVPIGYHGRASSIRPSGFDVRRPNGQRKRADEAEPTFGPSGNLDYELELGIFVGPGNALGEPVSIHAAGEHIAGFCL LNDWSARDIQGWEYQPLGPFLAKNFITTVSPWVVTPEALAPFRIPQPVRPQGDPAPLPYLLDAADQAQGALDITLEVLIE TPGLKEKGLPPHRLSRGSSSDLYWTAAQFVAHHTCGGCNLSPGDLMGTGTISGPTPDSFGSLLELSQGGKAPLTLASGEE RRFLEDGDTVIITGRAAREGFVSIGFGACSGTILPALG
Sequences:
>Translated_438_residues MIDATHDPARTSWVASANGHSDFPIQNLPFGIFSPPGGQPRGGVAIGDDILDLAVALELGLFEGIAKAAAQAAAGSTLNA FFALGAAPRAALRARLVQLLDAHGVERSNVEPHAGRLLHRAADCTLHLPAAIGDYTDFYAGISHATNVGKLFRPDNPLLP NYKYVPIGYHGRASSIRPSGFDVRRPNGQRKRADEAEPTFGPSGNLDYELELGIFVGPGNALGEPVSIHAAGEHIAGFCL LNDWSARDIQGWEYQPLGPFLAKNFITTVSPWVVTPEALAPFRIPQPVRPQGDPAPLPYLLDAADQAQGALDITLEVLIE TPGLKEKGLPPHRLSRGSSSDLYWTAAQFVAHHTCGGCNLSPGDLMGTGTISGPTPDSFGSLLELSQGGKAPLTLASGEE RRFLEDGDTVIITGRAAREGFVSIGFGACSGTILPALG >Mature_438_residues MIDATHDPARTSWVASANGHSDFPIQNLPFGIFSPPGGQPRGGVAIGDDILDLAVALELGLFEGIAKAAAQAAAGSTLNA FFALGAAPRAALRARLVQLLDAHGVERSNVEPHAGRLLHRAADCTLHLPAAIGDYTDFYAGISHATNVGKLFRPDNPLLP NYKYVPIGYHGRASSIRPSGFDVRRPNGQRKRADEAEPTFGPSGNLDYELELGIFVGPGNALGEPVSIHAAGEHIAGFCL LNDWSARDIQGWEYQPLGPFLAKNFITTVSPWVVTPEALAPFRIPQPVRPQGDPAPLPYLLDAADQAQGALDITLEVLIE TPGLKEKGLPPHRLSRGSSSDLYWTAAQFVAHHTCGGCNLSPGDLMGTGTISGPTPDSFGSLLELSQGGKAPLTLASGEE RRFLEDGDTVIITGRAAREGFVSIGFGACSGTILPALG
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4557587, Length=421, Percent_Identity=49.6437054631829, Blast_Score=380, Evalue=1e-105, Organism=Caenorhabditis elegans, GI17568863, Length=422, Percent_Identity=50.7109004739336, Blast_Score=363, Evalue=1e-100, Organism=Drosophila melanogaster, GI24657182, Length=420, Percent_Identity=46.4285714285714, Blast_Score=344, Evalue=6e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.2
Molecular weight: Translated: 46105; Mature: 46105
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDATHDPARTSWVASANGHSDFPIQNLPFGIFSPPGGQPRGGVAIGDDILDLAVALELG CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHH LFEGIAKAAAQAAAGSTLNAFFALGAAPRAALRARLVQLLDAHGVERSNVEPHAGRLLHR HHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH AADCTLHLPAAIGDYTDFYAGISHATNVGKLFRPDNPLLPNYKYVPIGYHGRASSIRPSG HCCCEEECCHHHCCHHHHHHHHHHHCCCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCC FDVRRPNGQRKRADEAEPTFGPSGNLDYELELGIFVGPGNALGEPVSIHAAGEHIAGFCL CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCEEEEEE LNDWSARDIQGWEYQPLGPFLAKNFITTVSPWVVTPEALAPFRIPQPVRPQGDPAPLPYL ECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECHHHCCCCCCCCCCCCCCCCCCCCHH LDAADQAQGALDITLEVLIETPGLKEKGLPPHRLSRGSSSDLYWTAAQFVAHHTCGGCNL CCCHHHCCCCEEEEEEEEEECCCCCCCCCCHHHHCCCCCCCEEEHHHHHHHHHCCCCCCC SPGDLMGTGTISGPTPDSFGSLLELSQGGKAPLTLASGEERRFLEDGDTVIITGRAAREG CCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCHHHCCCCEEEEECCCCCCC FVSIGFGACSGTILPALG EEEEEECCCCCCCCCCCC >Mature Secondary Structure MIDATHDPARTSWVASANGHSDFPIQNLPFGIFSPPGGQPRGGVAIGDDILDLAVALELG CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHH LFEGIAKAAAQAAAGSTLNAFFALGAAPRAALRARLVQLLDAHGVERSNVEPHAGRLLHR HHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH AADCTLHLPAAIGDYTDFYAGISHATNVGKLFRPDNPLLPNYKYVPIGYHGRASSIRPSG HCCCEEECCHHHCCHHHHHHHHHHHCCCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCC FDVRRPNGQRKRADEAEPTFGPSGNLDYELELGIFVGPGNALGEPVSIHAAGEHIAGFCL CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCEEEEEE LNDWSARDIQGWEYQPLGPFLAKNFITTVSPWVVTPEALAPFRIPQPVRPQGDPAPLPYL ECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECHHHCCCCCCCCCCCCCCCCCCCCHH LDAADQAQGALDITLEVLIETPGLKEKGLPPHRLSRGSSSDLYWTAAQFVAHHTCGGCNL CCCHHHCCCCEEEEEEEEEECCCCCCCCCCHHHHCCCCCCCEEEHHHHHHHHHCCCCCCC SPGDLMGTGTISGPTPDSFGSLLELSQGGKAPLTLASGEERRFLEDGDTVIITGRAAREG CCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCHHHCCCCEEEEECCCCCCC FVSIGFGACSGTILPALG EEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-fumarylacetoacetate; H2O
Specific reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA